| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is 150400493
Identifier: 150400493
GI number: 150400493
Start: 62540
End: 63148
Strand: Reverse
Name: 150400493
Synonym: Maeo_0055
Alternate gene names: NA
Gene position: 63148-62540 (Counterclockwise)
Preceding gene: 150400494
Following gene: 150400492
Centisome position: 4.02
GC content: 30.71
Gene sequence:
>609_bases ATGAAAAAAACCAACTATGGACATAAAAAGGATAAAAAACGAAAATTTGAAGATTATGCCTATATTTTGGATTATCTCGA ATATGGGTATTCAGACGATATAAGGCCGGCACACCAAAAAAAACCATTGGCACAGGCATTTGGAGAAAAACAATTTGTAT TAATGGAATTAATATTAAAAGATGATTGTCCAGTTGAATTGGCAGAAAGAGTTTATATTGGGAAAGATAAAAGAGATAAA GTAGATTTCGTAGCAAAAATGATAAAATACGAAGAATTAACTCCAACGGCAAAAACAGAATTATTTTATGTCATCAAAGA AGCAGTTAAAAGAAATGAGAATAGATTTGTAGAATTTATTAATAATTGCGGACCGATAACAAACAGAATGCATATGCTAC AATTACTCCCTGGAATAGGTAAAACAGTAATGTGGAAAATAATTGAAGAAAGGGAGCTCCGACCATTTAAAACATTTGAA GAAATAGAGGGGAGAGTTCATAGAAATGTAATGGATGCAATAGCAAGAAGAATAGAAGCCGAATTAAAAGAACCTCAAAA ATATTATTTATTTGTAGAATGGAAAGAGCACCATTTGGATTACAATTAA
Upstream 100 bases:
>100_bases CTCTACAAAGAGTTCTCGAACGGACTATATTTTAAGAAAATTACACTATTCAGTATTATAAAATAAATATTCCACTTTAA TAAATTTAAATGGTGTCATT
Downstream 100 bases:
>100_bases TAATATATAACTAAATATTTATAAATAAATATAAATAAATATAACTATACAATATTATATGATTGTTATATACATTATAT ATCATACACTGGTGTAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKKTNYGHKKDKKRKFEDYAYILDYLEYGYSDDIRPAHQKKPLAQAFGEKQFVLMELILKDDCPVELAERVYIGKDKRDK VDFVAKMIKYEELTPTAKTELFYVIKEAVKRNENRFVEFINNCGPITNRMHMLQLLPGIGKTVMWKIIEERELRPFKTFE EIEGRVHRNVMDAIARRIEAELKEPQKYYLFVEWKEHHLDYN
Sequences:
>Translated_202_residues MKKTNYGHKKDKKRKFEDYAYILDYLEYGYSDDIRPAHQKKPLAQAFGEKQFVLMELILKDDCPVELAERVYIGKDKRDK VDFVAKMIKYEELTPTAKTELFYVIKEAVKRNENRFVEFINNCGPITNRMHMLQLLPGIGKTVMWKIIEERELRPFKTFE EIEGRVHRNVMDAIARRIEAELKEPQKYYLFVEWKEHHLDYN >Mature_202_residues MKKTNYGHKKDKKRKFEDYAYILDYLEYGYSDDIRPAHQKKPLAQAFGEKQFVLMELILKDDCPVELAERVYIGKDKRDK VDFVAKMIKYEELTPTAKTELFYVIKEAVKRNENRFVEFINNCGPITNRMHMLQLLPGIGKTVMWKIIEERELRPFKTFE EIEGRVHRNVMDAIARRIEAELKEPQKYYLFVEWKEHHLDYN
Specific function: Unknown
COG id: COG1491
COG function: function code J; Predicted RNA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007003 - InterPro: IPR012340 [H]
Pfam domain/function: PF04919 DUF655 [H]
EC number: NA
Molecular weight: Translated: 24302; Mature: 24302
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTNYGHKKDKKRKFEDYAYILDYLEYGYSDDIRPAHQKKPLAQAFGEKQFVLMELILK CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCHHHHHHHHHC DDCPVELAERVYIGKDKRDKVDFVAKMIKYEELTPTAKTELFYVIKEAVKRNENRFVEFI CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH NNCGPITNRMHMLQLLPGIGKTVMWKIIEERELRPFKTFEEIEGRVHRNVMDAIARRIEA HCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELKEPQKYYLFVEWKEHHLDYN HHCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure MKKTNYGHKKDKKRKFEDYAYILDYLEYGYSDDIRPAHQKKPLAQAFGEKQFVLMELILK CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCHHHHHHHHHC DDCPVELAERVYIGKDKRDKVDFVAKMIKYEELTPTAKTELFYVIKEAVKRNENRFVEFI CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH NNCGPITNRMHMLQLLPGIGKTVMWKIIEERELRPFKTFEEIEGRVHRNVMDAIARRIEA HCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELKEPQKYYLFVEWKEHHLDYN HHCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]