| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400487
Identifier: 150400487
GI number: 150400487
Start: 55173
End: 57080
Strand: Reverse
Name: 150400487
Synonym: Maeo_0049
Alternate gene names: NA
Gene position: 57080-55173 (Counterclockwise)
Preceding gene: 150400488
Following gene: 150400485
Centisome position: 3.64
GC content: 33.81
Gene sequence:
>1908_bases TTGTCAGCCGAAGATATTTTAAATGAAATAAAAAATCATGTAATGAAAACAGCACCAGGAAATGCTGCAATTACAGATGT GCAATTTGAAGGACCCGAAGTAGTAATATATGCCAAAAATCCAGAGATTTTTTCCAACACATTTGTAAGAGAATTGGCAA AATTATTTAGAAAAAGGATAGCCATAAGACCAGACCCTTCTGTTTTAATGGAGCCAGAAATAGCAAAAAAGAAAATTTTA GAAATTATACCTGATGATGCCGAAATTACAAACTGCATATTTGATGCAAATACTGGAGAAATAATTATAGAATCAAAAAA ACCAGGGTTGGTAATCGGAAAAGAAGGTAGCACATTAGAAGAATTGAAAAAAGAAATAAAATGGGCACCTAAGCCAGTTC GAACCCCTCCAATTTCATCCGAAACTGTTAATGCCATAAGGGCAACATTATACAGGGAACGAATGGATGTAAAAGAAATT CTTAGGAGAGTTGGAAAGGTAATACATAGAGATGTTAAATTAAGAGAAGATTCATGGATAAGAATGTCTTTTTTAGGTGG GGCTCGAGAAGTAGGTAGAACTTGTAATTATCTACAAACCCCTGAAAGTAGAATATTAATTGATTGCGGTATAAATGTGG CAATGGATGGAGACAGAGCTTTTCCACATTTCGATGCTCCTGAATTTGCAGTTGAAGAAATTGATGCCGTAGTAGTTACT CACGCTCATTTAGACCATTGCGGTTTTGTCCCGGGGCTTTTTAGGTATGGATATGATGGTCCAATTTATTGTTCCAAACC AACCAGAGATTTAATGACTCTTTTACAAAAAGATTATATTGATATTGCTGAAAAAGAAGGAAAAGTTGTTCCATATTCTT CAAAAGATATTAAAAAATGTGTTAAACATATTATTCCTATTGATTATGGAGTAACAACCGATGTTGCACCTGCCATAAAA TTAACCATGCATAATGCAGGGCATATACTTGGTTCAGCAATAGCTCACTGCCATATCGGAGATGGATTATATAATATAGC ATATACAGGAGACATAAAATTTGAAGCCTCCCGATTATTGGAACCGGCCGTATGCAATTTCCCAAGATTAGAAACTTTAA TTATAGAATCTACCTATGGGGCTTATGATGATGTTTTACCGGATAAAGGAGAAACAGAACAGAACTTTTTAAAAGTAATT GCTGAAACAATTAAAAGAAAAGGAAAAATTATAATTCCTGTATTTGGAATTGGTAGGGCACAGGAATTAATGTTGGTATT AGAAGAAGGATATAATCAAGGCATATTTAATGCCCCTGTTTATTTAGATGGTATGATTTGGGAAGCTACGGCAATACATA CAGCATATCCTGAATATTTATCAAAAAATATGAGAAATAGGATATTCCACGAAGGAGATAATCCATTCCTTTCGGAAGTA TTTAAAAAAGTAAGAAATACCAACAATAGACGAAACATAATTGATAGCGATGAGCCCTGTATTATATTGACCACATCTGG AATGCTTAGCGGCGGTCCAAGTGTAGAATACTTTAAATCATTGGCTCATGATGAAAGAAACGCAATTGTATTTGTTGGTT ATCAATCAGAAGGAACTATGGGAAGAAAAATCCAAAGAGGCTGGAATGAAATCCCAGTAATGAATAGAAATGGAAAATCA AGAGCTGTAAAAGTAAATTTAAGTGTTCATACATTTGAAGGATTTTCAGGACATAGCGATAGAAGACAGCTTATAAAATA TTTAAGAAAGTTAAAACCTATGCCCGATAGAATATTAACAGTTCATGGGGAATCCTCTAAATGTATAGATTTAGCTAGTG CCGCATATAAATTATTTAAAAAAGAAACAAGAGCTCCGATGAATTTAGATGCCGTTAGATTAAAATAA
Upstream 100 bases:
>100_bases CTATTATTTTACAATTTAACCTATATTTTATACCACATATATCAACATATATATTTTATATCAAGATTATAATTTAATAA ATTTAATAGAGGAGTTTATT
Downstream 100 bases:
>100_bases AAAATATGAATATATGCTTTGGAGCTCCCATATTTTGCAATACAAAATCCAAATGATTTTGTTCAAAAGCAGAGCTTTTG AATACTAAAAATAAAAATAT
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MSAEDILNEIKNHVMKTAPGNAAITDVQFEGPEVVIYAKNPEIFSNTFVRELAKLFRKRIAIRPDPSVLMEPEIAKKKIL EIIPDDAEITNCIFDANTGEIIIESKKPGLVIGKEGSTLEELKKEIKWAPKPVRTPPISSETVNAIRATLYRERMDVKEI LRRVGKVIHRDVKLREDSWIRMSFLGGAREVGRTCNYLQTPESRILIDCGINVAMDGDRAFPHFDAPEFAVEEIDAVVVT HAHLDHCGFVPGLFRYGYDGPIYCSKPTRDLMTLLQKDYIDIAEKEGKVVPYSSKDIKKCVKHIIPIDYGVTTDVAPAIK LTMHNAGHILGSAIAHCHIGDGLYNIAYTGDIKFEASRLLEPAVCNFPRLETLIIESTYGAYDDVLPDKGETEQNFLKVI AETIKRKGKIIIPVFGIGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKNMRNRIFHEGDNPFLSEV FKKVRNTNNRRNIIDSDEPCIILTTSGMLSGGPSVEYFKSLAHDERNAIVFVGYQSEGTMGRKIQRGWNEIPVMNRNGKS RAVKVNLSVHTFEGFSGHSDRRQLIKYLRKLKPMPDRILTVHGESSKCIDLASAAYKLFKKETRAPMNLDAVRLK
Sequences:
>Translated_635_residues MSAEDILNEIKNHVMKTAPGNAAITDVQFEGPEVVIYAKNPEIFSNTFVRELAKLFRKRIAIRPDPSVLMEPEIAKKKIL EIIPDDAEITNCIFDANTGEIIIESKKPGLVIGKEGSTLEELKKEIKWAPKPVRTPPISSETVNAIRATLYRERMDVKEI LRRVGKVIHRDVKLREDSWIRMSFLGGAREVGRTCNYLQTPESRILIDCGINVAMDGDRAFPHFDAPEFAVEEIDAVVVT HAHLDHCGFVPGLFRYGYDGPIYCSKPTRDLMTLLQKDYIDIAEKEGKVVPYSSKDIKKCVKHIIPIDYGVTTDVAPAIK LTMHNAGHILGSAIAHCHIGDGLYNIAYTGDIKFEASRLLEPAVCNFPRLETLIIESTYGAYDDVLPDKGETEQNFLKVI AETIKRKGKIIIPVFGIGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKNMRNRIFHEGDNPFLSEV FKKVRNTNNRRNIIDSDEPCIILTTSGMLSGGPSVEYFKSLAHDERNAIVFVGYQSEGTMGRKIQRGWNEIPVMNRNGKS RAVKVNLSVHTFEGFSGHSDRRQLIKYLRKLKPMPDRILTVHGESSKCIDLASAAYKLFKKETRAPMNLDAVRLK >Mature_634_residues SAEDILNEIKNHVMKTAPGNAAITDVQFEGPEVVIYAKNPEIFSNTFVRELAKLFRKRIAIRPDPSVLMEPEIAKKKILE IIPDDAEITNCIFDANTGEIIIESKKPGLVIGKEGSTLEELKKEIKWAPKPVRTPPISSETVNAIRATLYRERMDVKEIL RRVGKVIHRDVKLREDSWIRMSFLGGAREVGRTCNYLQTPESRILIDCGINVAMDGDRAFPHFDAPEFAVEEIDAVVVTH AHLDHCGFVPGLFRYGYDGPIYCSKPTRDLMTLLQKDYIDIAEKEGKVVPYSSKDIKKCVKHIIPIDYGVTTDVAPAIKL TMHNAGHILGSAIAHCHIGDGLYNIAYTGDIKFEASRLLEPAVCNFPRLETLIIESTYGAYDDVLPDKGETEQNFLKVIA ETIKRKGKIIIPVFGIGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKNMRNRIFHEGDNPFLSEVF KKVRNTNNRRNIIDSDEPCIILTTSGMLSGGPSVEYFKSLAHDERNAIVFVGYQSEGTMGRKIQRGWNEIPVMNRNGKSR AVKVNLSVHTFEGFSGHSDRRQLIKYLRKLKPMPDRILTVHGESSKCIDLASAAYKLFKKETRAPMNLDAVRLK
Specific function: Unknown
COG id: COG1782
COG function: function code R; Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI33300633, Length=461, Percent_Identity=30.58568329718, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI7706427, Length=460, Percent_Identity=30.8695652173913, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI34101288, Length=375, Percent_Identity=22.4, Blast_Score=91, Evalue=3e-18, Organism=Caenorhabditis elegans, GI32564696, Length=460, Percent_Identity=30.2173913043478, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI32566029, Length=463, Percent_Identity=30.8855291576674, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17559452, Length=383, Percent_Identity=22.976501305483, Blast_Score=86, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6323307, Length=454, Percent_Identity=28.8546255506608, Blast_Score=184, Evalue=4e-47, Organism=Drosophila melanogaster, GI21358523, Length=455, Percent_Identity=31.4285714285714, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI24648013, Length=469, Percent_Identity=29.2110874200426, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI21358013, Length=378, Percent_Identity=23.2804232804233, Blast_Score=91, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022712 - InterPro: IPR001279 - InterPro: IPR004087 - InterPro: IPR019975 - InterPro: IPR004044 - InterPro: IPR011108 [H]
Pfam domain/function: PF10996 Beta-Casp; PF07650 KH_2; PF00753 Lactamase_B; PF07521 RMMBL [H]
EC number: NA
Molecular weight: Translated: 71461; Mature: 71330
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS50084 KH_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEDILNEIKNHVMKTAPGNAAITDVQFEGPEVVIYAKNPEIFSNTFVRELAKLFRKRI CCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHC AIRPDPSVLMEPEIAKKKILEIIPDDAEITNCIFDANTGEIIIESKKPGLVIGKEGSTLE CCCCCCCCEECCHHHHHHHHHHCCCCHHHHHEEEECCCCCEEEECCCCCEEEECCCCHHH ELKKEIKWAPKPVRTPPISSETVNAIRATLYRERMDVKEILRRVGKVIHRDVKLREDSWI HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEECCCCEE RMSFLGGAREVGRTCNYLQTPESRILIDCGINVAMDGDRAFPHFDAPEFAVEEIDAVVVT EEEECCCHHHHHHCCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCHHHHHHHCEEEEE HAHLDHCGFVPGLFRYGYDGPIYCSKPTRDLMTLLQKDYIDIAEKEGKVVPYSSKDIKKC EHHHHHCCCHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH VKHIIPIDYGVTTDVAPAIKLTMHNAGHILGSAIAHCHIGDGLYNIAYTGDIKFEASRLL HHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHEEECCCEEEEEEECCEEECHHHCC EPAVCNFPRLETLIIESTYGAYDDVLPDKGETEQNFLKVIAETIKRKGKIIIPVFGIGRA CHHHCCCCCCEEEEEECCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCH QELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKNMRNRIFHEGDNPFLSEV HHHHHHHHCCCCCCCCCCCEEECCEEEEHHHHHHHCHHHHHHHHHHHHEECCCCHHHHHH FKKVRNTNNRRNIIDSDEPCIILTTSGMLSGGPSVEYFKSLAHDERNAIVFVGYQSEGTM HHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCC GRKIQRGWNEIPVMNRNGKSRAVKVNLSVHTFEGFSGHSDRRQLIKYLRKLKPMPDRILT HHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEE VHGESSKCIDLASAAYKLFKKETRAPMNLDAVRLK EECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEC >Mature Secondary Structure SAEDILNEIKNHVMKTAPGNAAITDVQFEGPEVVIYAKNPEIFSNTFVRELAKLFRKRI CHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHC AIRPDPSVLMEPEIAKKKILEIIPDDAEITNCIFDANTGEIIIESKKPGLVIGKEGSTLE CCCCCCCCEECCHHHHHHHHHHCCCCHHHHHEEEECCCCCEEEECCCCCEEEECCCCHHH ELKKEIKWAPKPVRTPPISSETVNAIRATLYRERMDVKEILRRVGKVIHRDVKLREDSWI HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEECCCCEE RMSFLGGAREVGRTCNYLQTPESRILIDCGINVAMDGDRAFPHFDAPEFAVEEIDAVVVT EEEECCCHHHHHHCCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCHHHHHHHCEEEEE HAHLDHCGFVPGLFRYGYDGPIYCSKPTRDLMTLLQKDYIDIAEKEGKVVPYSSKDIKKC EHHHHHCCCHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH VKHIIPIDYGVTTDVAPAIKLTMHNAGHILGSAIAHCHIGDGLYNIAYTGDIKFEASRLL HHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHEEECCCEEEEEEECCEEECHHHCC EPAVCNFPRLETLIIESTYGAYDDVLPDKGETEQNFLKVIAETIKRKGKIIIPVFGIGRA CHHHCCCCCCEEEEEECCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCH QELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKNMRNRIFHEGDNPFLSEV HHHHHHHHCCCCCCCCCCCEEECCEEEEHHHHHHHCHHHHHHHHHHHHEECCCCHHHHHH FKKVRNTNNRRNIIDSDEPCIILTTSGMLSGGPSVEYFKSLAHDERNAIVFVGYQSEGTM HHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCC GRKIQRGWNEIPVMNRNGKSRAVKVNLSVHTFEGFSGHSDRRQLIKYLRKLKPMPDRILT HHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEE VHGESSKCIDLASAAYKLFKKETRAPMNLDAVRLK EECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]