Click here to switch to the map view.

The map label for this gene is 150400485

Identifier: 150400485

GI number: 150400485

Start: 53257

End: 53703

Strand: Reverse

Name: 150400485

Synonym: Maeo_0047

Alternate gene names: NA

Gene position: 53703-53257 (Counterclockwise)

Preceding gene: 150400487

Following gene: 150400477

Centisome position: 3.42

GC content: 32.21

Gene sequence:

>447_bases
ATGATAGGAAAAGATCCATTTTTTGAAAAAATATTATCTGAATTTTTAGGGGGAGCTCCTATGAGTATGACAACCATGAC
ATCAATGAGCTCCATGGGTTCAGGTGTTGAGATATCTGGAAAAGGACAAATGCCAATAACGCTGATTGAAGGAGATAACC
ACATAAAAATAATTGCCATGGTTCCGGGAATTGCCAAAGAAGATATTGTAATAAATGCAATCGGCGATACATTAGAAATT
AGGGCAAAAAGAACACCATTAATGATTACAGAATCAGAAAGAATAATTTATTCAGAAATCCCAGAAGACGAAGAAATTTA
CAGAACCATAAAATTACCTGCAACAGTAAAAGAAGATAGTGCTAAGGCAAAATATGAAAATGGTATTCTTATAGTAGAAT
TGCCAAAAAGTGAAATATCAATTAAAAAAGGAATAGATATTGAATAA

Upstream 100 bases:

>100_bases
GTGCATAATTATGTCATAACAATACACAAAACCGAAATATTTATATTGAATTACAACGGTATATTATATAGAAATAATAT
TGAATATTGGGGTGATAATT

Downstream 100 bases:

>100_bases
ATAATAATTAATAATTAATAATTAATTTATTTTTACTACATATATTATTTTACTATTTTTTTGTATTATTTTAATTATTA
TATTATTATTTTTATCTTTC

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MIGKDPFFEKILSEFLGGAPMSMTTMTSMSSMGSGVEISGKGQMPITLIEGDNHIKIIAMVPGIAKEDIVINAIGDTLEI
RAKRTPLMITESERIIYSEIPEDEEIYRTIKLPATVKEDSAKAKYENGILIVELPKSEISIKKGIDIE

Sequences:

>Translated_148_residues
MIGKDPFFEKILSEFLGGAPMSMTTMTSMSSMGSGVEISGKGQMPITLIEGDNHIKIIAMVPGIAKEDIVINAIGDTLEI
RAKRTPLMITESERIIYSEIPEDEEIYRTIKLPATVKEDSAKAKYENGILIVELPKSEISIKKGIDIE
>Mature_148_residues
MIGKDPFFEKILSEFLGGAPMSMTTMTSMSSMGSGVEISGKGQMPITLIEGDNHIKIIAMVPGIAKEDIVINAIGDTLEI
RAKRTPLMITESERIIYSEIPEDEEIYRTIKLPATVKEDSAKAKYENGILIVELPKSEISIKKGIDIE

Specific function: Chaperone that confers thermal protection to other proteins [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16244; Mature: 16244

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKDPFFEKILSEFLGGAPMSMTTMTSMSSMGSGVEISGKGQMPITLIEGDNHIKIIAM
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCEEEEEE
VPGIAKEDIVINAIGDTLEIRAKRTPLMITESERIIYSEIPEDEEIYRTIKLPATVKEDS
CCCCCCCCEEEEECCCEEEEEECCCCEEEECCCEEEEECCCCCHHEEEEEECCCEECCCC
AKAKYENGILIVELPKSEISIKKGIDIE
CCCEECCCEEEEEECCCCEEECCCCCCC
>Mature Secondary Structure
MIGKDPFFEKILSEFLGGAPMSMTTMTSMSSMGSGVEISGKGQMPITLIEGDNHIKIIAM
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCEEEEEE
VPGIAKEDIVINAIGDTLEIRAKRTPLMITESERIIYSEIPEDEEIYRTIKLPATVKEDS
CCCCCCCCEEEEECCCEEEEEECCCCEEEECCCEEEEECCCCCHHEEEEEECCCEECCCC
AKAKYENGILIVELPKSEISIKKGIDIE
CCCEECCCEEEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9689045; 9707123 [H]