Click here to switch to the map view.

The map label for this gene is ftsY [C]

Identifier: 150400486

GI number: 150400486

Start: 53921

End: 55072

Strand: Direct

Name: ftsY [C]

Synonym: Maeo_0048

Alternate gene names: 150400486

Gene position: 53921-55072 (Clockwise)

Preceding gene: 150400484

Following gene: 150400496

Centisome position: 3.44

GC content: 32.47

Gene sequence:

>1152_bases
ATGTTCGGGAAACTTAAAGAAAAATTAAATAAAACAGTTTCAAAAATAACTGAAAAAATATACAATAAAGGAGAAGTGAA
GGAACAAGAAGAAAAAGAAAAAGAAAAAGAATCAGAGATTATAACAACCGAAAAACCGCATAAAGAAGAAACTAAGGAAA
CCAAACCACAAACAGAAGAACCAAAAAAAGTTGGATTTTTCGATAAATTAAAAATAACAAAAGTCGTTAAAAAAACGCTT
GGTTATGATGTAGTATTAACAGAAGACGATATTGAGGAAGTTTTAGAAGAGTTGGAGATGGAGCTCCTTGAAGCTGATGT
AGCTTATGAAGTAGTTGAGAAGTTAATAGAATCTTTAAGAAATCAATTAATAGGTATAAAAATATCGGCAAAGGATGACC
CTGAGGAAATTACCATAAATGCACTAAGAAATGCCATTAAAGAGGTATTATCTCAAAAAGAAATAGACATATATAAACTC
ATTGAGGAAAAAAAAAGTAATGGGGAACCCACTGTTATTGTTGTTGTAGGTATTAATGGAACTGGAAAAACTACGACAAT
ATCCAAATTAGCATATAAACTTATGAACAATGGCTATTCTGTTGTTTTAGCTGCGGGAGATACATTTAGAGCAGGGGCAA
TTGAACAGTTGGAGGAACATGCTAAAAATATAGGGGCTAAAGTAATTAAACACCAAAAAGGCTCTGATGGTGCAGCTGTA
ATATATGATGCTATAAATCATGCAAAAGCCAGAGGTATATCCGTAGTTTTAGCCGATACAGCAGGACGACAAACTACAAA
TATCAATTTAATGGCTGAAATTAAAAAAGTAGTGAGGGTATCAAATCCAGATTTAGTGGTATTTGTTGGGGATTCCCTTG
CTGGAAATGATGCAATTACACAGGCAGAAGAGTTTAACAACATGGTAAATATTGATGGAGTAATACTCACAAAAACAGAT
GCAGACGCAAAAGGAGGGGCTGCTTTATCTATTGCCCATGCCATTGGAAAACCTATTTTATTTTTAGGTGTTGGTCAAAG
ATATGAGGATTTAATGGAATTTAATGTTAATTGGATGATAAACAAATTATTTGGGGACGAAAACGACGACAAAATAATTG
AAGAAAAAGAGAATATAATAAGAGAATTTTAA

Upstream 100 bases:

>100_bases
TATTATCGTAAACATATCAAACGATAAAATATATGGGGTATGTTAGGGAGCTCCGTTAATATGGAGCAAACTTTTTAAAC
ATACCATATTTGGTGATTAA

Downstream 100 bases:

>100_bases
ATATTTTTATTTTTAGTATTCAAAAGCTCTGCTTTTGAACAAAATCATTTGGATTTTGTATTGCAAAATATGGGAGCTCC
AAAGCATATATTCATATTTT

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MFGKLKEKLNKTVSKITEKIYNKGEVKEQEEKEKEKESEIITTEKPHKEETKETKPQTEEPKKVGFFDKLKITKVVKKTL
GYDVVLTEDDIEEVLEELEMELLEADVAYEVVEKLIESLRNQLIGIKISAKDDPEEITINALRNAIKEVLSQKEIDIYKL
IEEKKSNGEPTVIVVVGINGTGKTTTISKLAYKLMNNGYSVVLAAGDTFRAGAIEQLEEHAKNIGAKVIKHQKGSDGAAV
IYDAINHAKARGISVVLADTAGRQTTNINLMAEIKKVVRVSNPDLVVFVGDSLAGNDAITQAEEFNNMVNIDGVILTKTD
ADAKGGAALSIAHAIGKPILFLGVGQRYEDLMEFNVNWMINKLFGDENDDKIIEEKENIIREF

Sequences:

>Translated_383_residues
MFGKLKEKLNKTVSKITEKIYNKGEVKEQEEKEKEKESEIITTEKPHKEETKETKPQTEEPKKVGFFDKLKITKVVKKTL
GYDVVLTEDDIEEVLEELEMELLEADVAYEVVEKLIESLRNQLIGIKISAKDDPEEITINALRNAIKEVLSQKEIDIYKL
IEEKKSNGEPTVIVVVGINGTGKTTTISKLAYKLMNNGYSVVLAAGDTFRAGAIEQLEEHAKNIGAKVIKHQKGSDGAAV
IYDAINHAKARGISVVLADTAGRQTTNINLMAEIKKVVRVSNPDLVVFVGDSLAGNDAITQAEEFNNMVNIDGVILTKTD
ADAKGGAALSIAHAIGKPILFLGVGQRYEDLMEFNVNWMINKLFGDENDDKIIEEKENIIREF
>Mature_383_residues
MFGKLKEKLNKTVSKITEKIYNKGEVKEQEEKEKEKESEIITTEKPHKEETKETKPQTEEPKKVGFFDKLKITKVVKKTL
GYDVVLTEDDIEEVLEELEMELLEADVAYEVVEKLIESLRNQLIGIKISAKDDPEEITINALRNAIKEVLSQKEIDIYKL
IEEKKSNGEPTVIVVVGINGTGKTTTISKLAYKLMNNGYSVVLAAGDTFRAGAIEQLEEHAKNIGAKVIKHQKGSDGAAV
IYDAINHAKARGISVVLADTAGRQTTNINLMAEIKKVVRVSNPDLVVFVGDSLAGNDAITQAEEFNNMVNIDGVILTKTD
ADAKGGAALSIAHAIGKPILFLGVGQRYEDLMEFNVNWMINKLFGDENDDKIIEEKENIIREF

Specific function: Probably involved in the signal sequence recognition [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI295424842, Length=304, Percent_Identity=35.1973684210526, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI23308697, Length=304, Percent_Identity=35.1973684210526, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI4507215, Length=302, Percent_Identity=31.7880794701987, Blast_Score=141, Evalue=8e-34,
Organism=Homo sapiens, GI226371618, Length=200, Percent_Identity=35.5, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI89061728, Length=117, Percent_Identity=35.8974358974359, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1789874, Length=344, Percent_Identity=39.2441860465116, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1788963, Length=316, Percent_Identity=33.8607594936709, Blast_Score=169, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI193206261, Length=298, Percent_Identity=37.9194630872483, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17539958, Length=293, Percent_Identity=30.3754266211604, Blast_Score=137, Evalue=7e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=315, Percent_Identity=32.0634920634921, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6325345, Length=310, Percent_Identity=30, Blast_Score=133, Evalue=4e-32,
Organism=Drosophila melanogaster, GI24641198, Length=300, Percent_Identity=38.3333333333333, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI17647949, Length=297, Percent_Identity=31.6498316498317, Blast_Score=142, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 42545; Mature: 42545

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGKLKEKLNKTVSKITEKIYNKGEVKEQEEKEKEKESEIITTEKPHKEETKETKPQTEE
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCC
PKKVGFFDKLKITKVVKKTLGYDVVLTEDDIEEVLEELEMELLEADVAYEVVEKLIESLR
CCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQLIGIKISAKDDPEEITINALRNAIKEVLSQKEIDIYKLIEEKKSNGEPTVIVVVGING
HHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEEECC
TGKTTTISKLAYKLMNNGYSVVLAAGDTFRAGAIEQLEEHAKNIGAKVIKHQKGSDGAAV
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
IYDAINHAKARGISVVLADTAGRQTTNINLMAEIKKVVRVSNPDLVVFVGDSLAGNDAIT
HHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
QAEEFNNMVNIDGVILTKTDADAKGGAALSIAHAIGKPILFLGVGQRYEDLMEFNVNWMI
HHHHHCCEEECCEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCHHHEE
NKLFGDENDDKIIEEKENIIREF
HHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MFGKLKEKLNKTVSKITEKIYNKGEVKEQEEKEKEKESEIITTEKPHKEETKETKPQTEE
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCC
PKKVGFFDKLKITKVVKKTLGYDVVLTEDDIEEVLEELEMELLEADVAYEVVEKLIESLR
CCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQLIGIKISAKDDPEEITINALRNAIKEVLSQKEIDIYKLIEEKKSNGEPTVIVVVGING
HHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEEECC
TGKTTTISKLAYKLMNNGYSVVLAAGDTFRAGAIEQLEEHAKNIGAKVIKHQKGSDGAAV
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
IYDAINHAKARGISVVLADTAGRQTTNINLMAEIKKVVRVSNPDLVVFVGDSLAGNDAIT
HHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
QAEEFNNMVNIDGVILTKTDADAKGGAALSIAHAIGKPILFLGVGQRYEDLMEFNVNWMI
HHHHHCCEEECCEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCHHHEE
NKLFGDENDDKIIEEKENIIREF
HHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]