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The map label for this gene is yhcC [C]

Identifier: 150400484

GI number: 150400484

Start: 52089

End: 53165

Strand: Direct

Name: yhcC [C]

Synonym: Maeo_0046

Alternate gene names: 150400484

Gene position: 52089-53165 (Clockwise)

Preceding gene: 150400483

Following gene: 150400486

Centisome position: 3.32

GC content: 31.75

Gene sequence:

>1077_bases
ATGGAAAAATACTTAAAAGAATTAAGAAATAGGCACCTAAAAAAAAGAAAAGAAAAAAATCCTGACCGCCCAATTGCTAC
CTGGGTACAGGACGATATTTTTAGGGATAAAACCAATGGAAAAAGCATAACAATAATATTGCGAACTGTTGGCTGTAAAT
ATGCCTATGATACAGGCGGTTGCACTATGTGTAGTTATTTAATGGATAGCTCCCCCATAAAAATTACCAGCGAAAATATA
ATCAATCAATTCAATGGAGTATTGGACAAATACAAAGAGGAATTAGAAAATAATAGTAAGAATTATTCAATTAAATTATT
TACTTCTGGTAGCTTTTTAGATGAGTTCGAAGTTCCAAACGATGCAATGGAGCATATTTTTAAAACCATTGGGGAATTGA
ATGTAAAAGAGGTTGCAATTGAATCCAGACCAGAATATATAACCAATGAAACAATGGAATTAATCCGAAAACATATAAAT
AATGATATTAATGTGGAAATCGGAGTGGGAATTGAAACTGCAAATGAGGAAATAAGAAATATCTCAATACATAAAGGAAT
ATCCAATAAAGATATTGAAGATGCCATAACTACTGCAAATAAATACGCCGTAGGTATTAAGGCGTATTTATTAATAAAGC
CACCATTTATAACTGAAAAACAGGCAATGGAAGATTCAATTAATTCCGCAAATAAATATATTGAAATGGGAGTTAGTAGA
ATATCATTCTGCCCGTCCTCAATTCATAAGGGAAGTTTGGTGGAGCTCCTATGGAAAAAAAATCAATATAGGCCACCATT
TTTATGGACGGTAATAGAAATATTAAAAGAAGTAAAATCTAAAAATCCCGATAAACTTATAATGTGCGATACCTCAGGAA
TACCATCAAATAGGGGAGCACATAATAAAATAGACTGTGAGTGCAACTATAAAATAAAAGAAGCTTTGGGGGATTATACC
CTTACACAGGATTTATCTTTAATTGAAAATATAGACTGCGAATGTAAGACCTATTGGGCTGAATTTATGAAATATGAGGA
AAAAAATATAGTACCTTTGGGGGATTATGAAAGATAA

Upstream 100 bases:

>100_bases
AAAGGCAATAAAATCTGTTAAAGAAGGAGATTTGGGGGTTTATTCTTTAAATGACCTTGAAAATAAATAATAAATATAAT
AGTAAAATACTAGTGATACA

Downstream 100 bases:

>100_bases
AAATAATAATATAATAATTAAAATAATACAAAAAAATAGTAAAATAATATATGTAGTAAAAATAAATTAATTATTAATTA
TTAATTATTATTTATTCAAT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MEKYLKELRNRHLKKRKEKNPDRPIATWVQDDIFRDKTNGKSITIILRTVGCKYAYDTGGCTMCSYLMDSSPIKITSENI
INQFNGVLDKYKEELENNSKNYSIKLFTSGSFLDEFEVPNDAMEHIFKTIGELNVKEVAIESRPEYITNETMELIRKHIN
NDINVEIGVGIETANEEIRNISIHKGISNKDIEDAITTANKYAVGIKAYLLIKPPFITEKQAMEDSINSANKYIEMGVSR
ISFCPSSIHKGSLVELLWKKNQYRPPFLWTVIEILKEVKSKNPDKLIMCDTSGIPSNRGAHNKIDCECNYKIKEALGDYT
LTQDLSLIENIDCECKTYWAEFMKYEEKNIVPLGDYER

Sequences:

>Translated_358_residues
MEKYLKELRNRHLKKRKEKNPDRPIATWVQDDIFRDKTNGKSITIILRTVGCKYAYDTGGCTMCSYLMDSSPIKITSENI
INQFNGVLDKYKEELENNSKNYSIKLFTSGSFLDEFEVPNDAMEHIFKTIGELNVKEVAIESRPEYITNETMELIRKHIN
NDINVEIGVGIETANEEIRNISIHKGISNKDIEDAITTANKYAVGIKAYLLIKPPFITEKQAMEDSINSANKYIEMGVSR
ISFCPSSIHKGSLVELLWKKNQYRPPFLWTVIEILKEVKSKNPDKLIMCDTSGIPSNRGAHNKIDCECNYKIKEALGDYT
LTQDLSLIENIDCECKTYWAEFMKYEEKNIVPLGDYER
>Mature_358_residues
MEKYLKELRNRHLKKRKEKNPDRPIATWVQDDIFRDKTNGKSITIILRTVGCKYAYDTGGCTMCSYLMDSSPIKITSENI
INQFNGVLDKYKEELENNSKNYSIKLFTSGSFLDEFEVPNDAMEHIFKTIGELNVKEVAIESRPEYITNETMELIRKHIN
NDINVEIGVGIETANEEIRNISIHKGISNKDIEDAITTANKYAVGIKAYLLIKPPFITEKQAMEDSINSANKYIEMGVSR
ISFCPSSIHKGSLVELLWKKNQYRPPFLWTVIEILKEVKSKNPDKLIMCDTSGIPSNRGAHNKIDCECNYKIKEALGDYT
LTQDLSLIENIDCECKTYWAEFMKYEEKNIVPLGDYER

Specific function: Unknown

COG id: COG1244

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005909
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41203; Mature: 41203

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYLKELRNRHLKKRKEKNPDRPIATWVQDDIFRDKTNGKSITIILRTVGCKYAYDTGG
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEECCCC
CTMCSYLMDSSPIKITSENIINQFNGVLDKYKEELENNSKNYSIKLFTSGSFLDEFEVPN
HHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHCCCCH
DAMEHIFKTIGELNVKEVAIESRPEYITNETMELIRKHINNDINVEIGVGIETANEEIRN
HHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCEECCCHHHHE
ISIHKGISNKDIEDAITTANKYAVGIKAYLLIKPPFITEKQAMEDSINSANKYIEMGVSR
EHEECCCCCCCHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ISFCPSSIHKGSLVELLWKKNQYRPPFLWTVIEILKEVKSKNPDKLIMCDTSGIPSNRGA
HHHCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
HNKIDCECNYKIKEALGDYTLTQDLSLIENIDCECKTYWAEFMKYEEKNIVPLGDYER
CCEECCEECCCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEKYLKELRNRHLKKRKEKNPDRPIATWVQDDIFRDKTNGKSITIILRTVGCKYAYDTGG
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEECCCC
CTMCSYLMDSSPIKITSENIINQFNGVLDKYKEELENNSKNYSIKLFTSGSFLDEFEVPN
HHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHCCCCH
DAMEHIFKTIGELNVKEVAIESRPEYITNETMELIRKHINNDINVEIGVGIETANEEIRN
HHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCEECCCHHHHE
ISIHKGISNKDIEDAITTANKYAVGIKAYLLIKPPFITEKQAMEDSINSANKYIEMGVSR
EHEECCCCCCCHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ISFCPSSIHKGSLVELLWKKNQYRPPFLWTVIEILKEVKSKNPDKLIMCDTSGIPSNRGA
HHHCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
HNKIDCECNYKIKEALGDYTLTQDLSLIENIDCECKTYWAEFMKYEEKNIVPLGDYER
CCEECCEECCCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]