| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400466
Identifier: 150400466
GI number: 150400466
Start: 29701
End: 30714
Strand: Direct
Name: 150400466
Synonym: Maeo_0027
Alternate gene names: NA
Gene position: 29701-30714 (Clockwise)
Preceding gene: 150400465
Following gene: 150400467
Centisome position: 1.89
GC content: 31.76
Gene sequence:
>1014_bases ATGAAAGATTTAAGACCTATAATATGGGATAATGAAAAAAATCAATTGATATTAATTGACCAGAGAAAACTACCAAATAG TTTGGAATATTTTGTATGTAAAACCTATGAAGATGTTGCATTTGCAATTAAAGATATGGTTGTTAGGGGAGCTCCTGCAA TAGGCGTATCTGCGGCTTATGGAATGGCACTTGCTGAATTAAATAACAACAATATCGCTTGCGGTAGCAAGCGAGCAACG AAAACCAAAGGTTTTCGTCTAATAGAAAAAGCACACAATGAGTTAAAAAACACAAGACCAACAGCCGTAAATTTATTTTG GGCTTTGGATAGATGTATGGAAGCATACAAAAACAATAAATCAATATTAAACGAAGCAAAAGAAATACATAATGAAGACA TAGAAATATGTAAAAAAATAGGGCAAATAGGGGAAAAAATAATAAATGACGGAGATACAATTTTAACACATTGCAATGCG GGAGCTTTGGCAACTTCGGCATATGGAACAGCTTTAAGTGTGATTAGATTTGCCCACTATAACAACAAAAAAATCAGCGT CATAGCAGATGAAACCAGGCCCCGATTACAGGGGGCAAATCTAACGGCTTATGAGTTAAATTATGAAAATATACCTGTTA AAGTAATAACTGATAATACCGCAGGATTTTTAATGAAAATGGGAAAAATAGATAAAATAATTGTAGGGGCAGATAGAATA TTAAAAGATTATACGGTATTTAATAAAATTGGGACATATTCTCTTGCAGTGTTGGCAAAATATCATAATGTGCCTTTTTA TGTGGGAGCTCCCTACTCTACATTTGATTATGAAAATAGCATTGAAGATATTATAATTGAAGAAAGAGACGAAAAAGAAG TAAAATATATAAACAATATAAATATTATGCCAGAAGGCGTTTCTGTGTATAATTATGCTTTTGATAGCACACCTGCGGAA TTAATTACTGGAATAATCACAGAAAAAGAAATAATTTATCCAAATAAAAAATAA
Upstream 100 bases:
>100_bases ATTAAACAATTTATATTATGGGACCTCCAAAATGTTCTGAAATAAAATTAGTTTAGAATTTTAAGATTTACGAATTATTA ATATATATGGATATGATATT
Downstream 100 bases:
>100_bases TAAATATATAAATAATAAATATATAATACAAATATCAAAATATAAAATTATTATAAAATTATAAAAACTAAATAAGGAGA TATAAAATGTATGCATTAGG
Product: aIF-2BI family translation initiation factor
Products: NA
Alternate protein names: M1Pi; MTR-1-P isomerase; MTNA-like protein; aMTNA; S-methyl-5-thioribose-1-phosphate isomerase [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKDLRPIIWDNEKNQLILIDQRKLPNSLEYFVCKTYEDVAFAIKDMVVRGAPAIGVSAAYGMALAELNNNNIACGSKRAT KTKGFRLIEKAHNELKNTRPTAVNLFWALDRCMEAYKNNKSILNEAKEIHNEDIEICKKIGQIGEKIINDGDTILTHCNA GALATSAYGTALSVIRFAHYNNKKISVIADETRPRLQGANLTAYELNYENIPVKVITDNTAGFLMKMGKIDKIIVGADRI LKDYTVFNKIGTYSLAVLAKYHNVPFYVGAPYSTFDYENSIEDIIIEERDEKEVKYINNINIMPEGVSVYNYAFDSTPAE LITGIITEKEIIYPNKK
Sequences:
>Translated_337_residues MKDLRPIIWDNEKNQLILIDQRKLPNSLEYFVCKTYEDVAFAIKDMVVRGAPAIGVSAAYGMALAELNNNNIACGSKRAT KTKGFRLIEKAHNELKNTRPTAVNLFWALDRCMEAYKNNKSILNEAKEIHNEDIEICKKIGQIGEKIINDGDTILTHCNA GALATSAYGTALSVIRFAHYNNKKISVIADETRPRLQGANLTAYELNYENIPVKVITDNTAGFLMKMGKIDKIIVGADRI LKDYTVFNKIGTYSLAVLAKYHNVPFYVGAPYSTFDYENSIEDIIIEERDEKEVKYINNINIMPEGVSVYNYAFDSTPAE LITGIITEKEIIYPNKK >Mature_337_residues MKDLRPIIWDNEKNQLILIDQRKLPNSLEYFVCKTYEDVAFAIKDMVVRGAPAIGVSAAYGMALAELNNNNIACGSKRAT KTKGFRLIEKAHNELKNTRPTAVNLFWALDRCMEAYKNNKSILNEAKEIHNEDIEICKKIGQIGEKIINDGDTILTHCNA GALATSAYGTALSVIRFAHYNNKKISVIADETRPRLQGANLTAYELNYENIPVKVITDNTAGFLMKMGKIDKIIVGADRI LKDYTVFNKIGTYSLAVLAKYHNVPFYVGAPYSTFDYENSIEDIIIEERDEKEVKYINNINIMPEGVSVYNYAFDSTPAE LITGIITEKEIIYPNKK
Specific function: Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P) [H]
COG id: COG0182
COG function: function code J; Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily [H]
Homologues:
Organism=Homo sapiens, GI72534748, Length=345, Percent_Identity=35.9420289855072, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI23943880, Length=328, Percent_Identity=32.6219512195122, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI4503503, Length=162, Percent_Identity=36.4197530864198, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17557462, Length=336, Percent_Identity=35.1190476190476, Blast_Score=166, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6325375, Length=399, Percent_Identity=32.8320802005013, Blast_Score=159, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6322878, Length=236, Percent_Identity=27.1186440677966, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI21357667, Length=349, Percent_Identity=37.2492836676218, Blast_Score=204, Evalue=7e-53, Organism=Drosophila melanogaster, GI24651647, Length=349, Percent_Identity=37.2492836676218, Blast_Score=204, Evalue=7e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000649 - InterPro: IPR005251 - InterPro: IPR011559 [H]
Pfam domain/function: PF01008 IF-2B [H]
EC number: =5.3.1.23 [H]
Molecular weight: Translated: 37939; Mature: 37939
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLRPIIWDNEKNQLILIDQRKLPNSLEYFVCKTYEDVAFAIKDMVVRGAPAIGVSAAY CCCCCCCEECCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHH GMALAELNNNNIACGSKRATKTKGFRLIEKAHNELKNTRPTAVNLFWALDRCMEAYKNNK HEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCH SILNEAKEIHNEDIEICKKIGQIGEKIINDGDTILTHCNAGALATSAYGTALSVIRFAHY HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC NNKKISVIADETRPRLQGANLTAYELNYENIPVKVITDNTAGFLMKMGKIDKIIVGADRI CCCEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCCCCEEEECHHHH LKDYTVFNKIGTYSLAVLAKYHNVPFYVGAPYSTFDYENSIEDIIIEERDEKEVKYINNI HHHHHHHHHHCHHHHEEHHHHCCCCEEECCCCCCCCCCCCHHHHEECCCCCCHHHHHCCC NIMPEGVSVYNYAFDSTPAELITGIITEKEIIYPNKK EECCCCCEEEEEECCCCHHHHHHHHHCCCEEECCCCC >Mature Secondary Structure MKDLRPIIWDNEKNQLILIDQRKLPNSLEYFVCKTYEDVAFAIKDMVVRGAPAIGVSAAY CCCCCCCEECCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHH GMALAELNNNNIACGSKRATKTKGFRLIEKAHNELKNTRPTAVNLFWALDRCMEAYKNNK HEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCH SILNEAKEIHNEDIEICKKIGQIGEKIINDGDTILTHCNAGALATSAYGTALSVIRFAHY HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC NNKKISVIADETRPRLQGANLTAYELNYENIPVKVITDNTAGFLMKMGKIDKIIVGADRI CCCEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCCCCEEEECHHHH LKDYTVFNKIGTYSLAVLAKYHNVPFYVGAPYSTFDYENSIEDIIIEERDEKEVKYINNI HHHHHHHHHHCHHHHEEHHHHCCCCEEECCCCCCCCCCCCHHHHEECCCCCCHHHHHCCC NIMPEGVSVYNYAFDSTPAELITGIITEKEIIYPNKK EECCCCCEEEEEECCCCHHHHHHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]