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The map label for this gene is hypA

Identifier: 150400463

GI number: 150400463

Start: 25119

End: 25490

Strand: Direct

Name: hypA

Synonym: Maeo_0024

Alternate gene names: 150400463

Gene position: 25119-25490 (Clockwise)

Preceding gene: 150400462

Following gene: 150400465

Centisome position: 1.6

GC content: 31.45

Gene sequence:

>372_bases
ATGCATGAATTATCTTATGCCACTTCCATAGTAAATGCCATAATGGAGCATATTACAAACATGGAACAGGCTAATAAAGT
TAAAAAAGTATCCAAAATAAATTTGGAAATCGGAGAACTTACTTTTATTAATTTTGAGCAGTTGAAATTTGCCTTTGAAG
TGGCATCAGAGGGAACACTATGTAAAGATGCCAAACTTGAAGCAGAATTCTTAAAACCACATATTGCATGTAATAATTGC
GGATATAGGGGAGAATTAACGGCAAATGATGAATTTGAAGTAAAATGTCCAGAATGTGGAAGTTTATCTCTAAAAATAAG
TGGCGGAAAAGAATTCAATATTAAAAATGCTATTTTGGAATCTGATGAATAA

Upstream 100 bases:

>100_bases
GCACAATACAAAAAACTTTGAAAAAACACACAATATATTATATAGATTATATGCATTATATGTGTGTATAATATTTTTTA
TTAAATTTTAAGGTGTTAAG

Downstream 100 bases:

>100_bases
TAATATTATTTTGTTTATATTATATTTTTTTATATTTTTTTATATTTGATTGTATCTCTAATTATATTTTTAATTTATCC
CCTAATCGCGGAGTAATCGT

Product: hydrogenase nickel insertion protein HypA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MHELSYATSIVNAIMEHITNMEQANKVKKVSKINLEIGELTFINFEQLKFAFEVASEGTLCKDAKLEAEFLKPHIACNNC
GYRGELTANDEFEVKCPECGSLSLKISGGKEFNIKNAILESDE

Sequences:

>Translated_123_residues
MHELSYATSIVNAIMEHITNMEQANKVKKVSKINLEIGELTFINFEQLKFAFEVASEGTLCKDAKLEAEFLKPHIACNNC
GYRGELTANDEFEVKCPECGSLSLKISGGKEFNIKNAILESDE
>Mature_123_residues
MHELSYATSIVNAIMEHITNMEQANKVKKVSKINLEIGELTFINFEQLKFAFEVASEGTLCKDAKLEAEFLKPHIACNNC
GYRGELTANDEFEVKCPECGSLSLKISGGKEFNIKNAILESDE

Specific function: Probably plays a role in an hydrogenase nickel cofactor insertion step

COG id: COG0375

COG function: function code R; Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypA/hybF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HYPA_META3 (A6USZ5)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324229.1
- STRING:   A6USZ5
- GeneID:   5327466
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0024
- eggNOG:   arNOG11688
- HOGENOM:   HBG688671
- OMA:   MHELSYA
- ProtClustDB:   CLSK876114
- BioCyc:   MAEO419665:MAEO_0024-MONOMER
- HAMAP:   MF_00213
- InterPro:   IPR000688
- TIGRFAMs:   TIGR00100

Pfam domain/function: PF01155 HypA

EC number: NA

Molecular weight: Translated: 13706; Mature: 13706

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS01249 HYPA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHELSYATSIVNAIMEHITNMEQANKVKKVSKINLEIGELTFINFEQLKFAFEVASEGTL
CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCEEEECCEEEEEHHHHHEEEECCCCCCC
CKDAKLEAEFLKPHIACNNCGYRGELTANDEFEVKCPECGSLSLKISGGKEFNIKNAILE
CCCCCCCHHHCCCEEEECCCCCCCEECCCCCEEEECCCCCCEEEEECCCCEECCCCCEEC
SDE
CCC
>Mature Secondary Structure
MHELSYATSIVNAIMEHITNMEQANKVKKVSKINLEIGELTFINFEQLKFAFEVASEGTL
CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCEEEECCEEEEEHHHHHEEEECCCCCCC
CKDAKLEAEFLKPHIACNNCGYRGELTANDEFEVKCPECGSLSLKISGGKEFNIKNAILE
CCCCCCCHHHCCCEEEECCCCCCCEECCCCCEEEECCCCCCEEEEECCCCEECCCCCEEC
SDE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA