| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400375
Identifier: 150400375
GI number: 150400375
Start: 1655477
End: 1655968
Strand: Reverse
Name: 150400375
Synonym: Mevan_1638
Alternate gene names: NA
Gene position: 1655968-1655477 (Counterclockwise)
Preceding gene: 150400376
Following gene: 150400374
Centisome position: 96.27
GC content: 33.13
Gene sequence:
>492_bases TTGTCAAAAATTGAAGAACTGAAAAAGCCAAAAATCGGCTTTGATGAACCTGAACTCGCAGAACTTGAAAAAATGATATC TGGAACTTGCGGAAAAGCTTATGTTATGCTTCAACCCGGAAGTATTGCAGTTTCATTGAAAGATGAGTTTGGAAATCCGA TAAAAGAAGAAAAAAATGGAAAAGAAGTCCAAAAATATGAATACATTCCGGATCTAGATATTCCCGGAAAAGTTTTCATT AAGGGCGGAATCAACAATGGAAAGATCATGCTATCGTTTACAGATGCAATGTCCGTTTATAAATTCATACAGTCAAACGA GGCATTTTTAAACCATAATACTAATTTAGAAACCCTTGCAGAACTAAAAAACTTACATAGCAATCTAAATTACTCGATGG AAGACATATACTTACTTGCTGAACGAAAGAGCATTTCTAAAGACTATGTGGATAGAGTATTTTCCAAAATGTCTGAAAGA AATAAAAATTAG
Upstream 100 bases:
>100_bases GTTAACTTTAAATACTTTAAAGCATGAATACTAATCATGAATGTAGTAATGCAGTATAACATTAAAACCATATTGCATTA AAAATAATTGAGGTGAACAA
Downstream 100 bases:
>100_bases GTGGGAACTTGGCAATACCCATGAAAGTTTGGAAATCGAGAGAAAAAAGGAGGCTCGACATAACCCCAAAAAAATACGGG ATTTGTTCAAATCCCAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSKIEELKKPKIGFDEPELAELEKMISGTCGKAYVMLQPGSIAVSLKDEFGNPIKEEKNGKEVQKYEYIPDLDIPGKVFI KGGINNGKIMLSFTDAMSVYKFIQSNEAFLNHNTNLETLAELKNLHSNLNYSMEDIYLLAERKSISKDYVDRVFSKMSER NKN
Sequences:
>Translated_163_residues MSKIEELKKPKIGFDEPELAELEKMISGTCGKAYVMLQPGSIAVSLKDEFGNPIKEEKNGKEVQKYEYIPDLDIPGKVFI KGGINNGKIMLSFTDAMSVYKFIQSNEAFLNHNTNLETLAELKNLHSNLNYSMEDIYLLAERKSISKDYVDRVFSKMSER NKN >Mature_162_residues SKIEELKKPKIGFDEPELAELEKMISGTCGKAYVMLQPGSIAVSLKDEFGNPIKEEKNGKEVQKYEYIPDLDIPGKVFIK GGINNGKIMLSFTDAMSVYKFIQSNEAFLNHNTNLETLAELKNLHSNLNYSMEDIYLLAERKSISKDYVDRVFSKMSERN KN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18552; Mature: 18420
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIEELKKPKIGFDEPELAELEKMISGTCGKAYVMLQPGSIAVSLKDEFGNPIKEEKNG CCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEEEEHHHCCCCCCCCCC KEVQKYEYIPDLDIPGKVFIKGGINNGKIMLSFTDAMSVYKFIQSNEAFLNHNTNLETLA CHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHCCCCEECCCCCHHHHH ELKNLHSNLNYSMEDIYLLAERKSISKDYVDRVFSKMSERNKN HHHHHHHCCCCCHHHHEEEHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKIEELKKPKIGFDEPELAELEKMISGTCGKAYVMLQPGSIAVSLKDEFGNPIKEEKNG CCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEEEEHHHCCCCCCCCCC KEVQKYEYIPDLDIPGKVFIKGGINNGKIMLSFTDAMSVYKFIQSNEAFLNHNTNLETLA CHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHCCCCEECCCCCHHHHH ELKNLHSNLNYSMEDIYLLAERKSISKDYVDRVFSKMSERNKN HHHHHHHCCCCCHHHHEEEHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA