| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is mntR [C]
Identifier: 150400304
GI number: 150400304
Start: 1578724
End: 1579170
Strand: Reverse
Name: mntR [C]
Synonym: Mevan_1567
Alternate gene names: 150400304
Gene position: 1579170-1578724 (Counterclockwise)
Preceding gene: 150400307
Following gene: 150400303
Centisome position: 91.81
GC content: 30.43
Gene sequence:
>447_bases ATGTGCATTCCATGCTATTTATATTTTTCTTTTGGTGGTAATTTGGTATCTCAAAATATTGAAGATTATCTTGAAACTAT TTTTTTATTCATAAAGGAGAAAAAAAGACCAGTTAAAACAACAGAACTTGCAAGACTAATGAATGTACAGCCTGCTGCGG TAACTAGCATGGCTAAAAAATTAAGTCATGATGGATTAATTCATTATGAGCCATACGTTGGAATATATCTTGATGAAGAT GGCGAAGAAATTGCAAAAAACACGCTTAGAAAACACCGTATCATTGAATATTTTCTTACAGAATTTTTAAATCTGGATTT AGATTTCGCAAAAGATGAAGCTTGCAAAATAGAACACGTGGTTTCCGATAAAACTATTGAAAAATTGTATGAATTTATAG ATAAGCCTGAAAAGTGTCCGCACGGCGAAAATATAAATTTAAAATAA
Upstream 100 bases:
>100_bases TTGTAAAATGCTCTCCATAAAACCACCAGCTATATATAATAATAAGCCATATACTATATTTAATACATATTAAACAATTT AAATAAGATTAAATACATCT
Downstream 100 bases:
>100_bases GCTTAAAATAATTTTAAACTAGTTTTAAAATACCAATATACTTTTTTACAATGTCTAAATTTTAAAAACAAAATCATAAC GATTAAATATTGTTTGAAGG
Product: iron dependent repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MCIPCYLYFSFGGNLVSQNIEDYLETIFLFIKEKKRPVKTTELARLMNVQPAAVTSMAKKLSHDGLIHYEPYVGIYLDED GEEIAKNTLRKHRIIEYFLTEFLNLDLDFAKDEACKIEHVVSDKTIEKLYEFIDKPEKCPHGENINLK
Sequences:
>Translated_148_residues MCIPCYLYFSFGGNLVSQNIEDYLETIFLFIKEKKRPVKTTELARLMNVQPAAVTSMAKKLSHDGLIHYEPYVGIYLDED GEEIAKNTLRKHRIIEYFLTEFLNLDLDFAKDEACKIEHVVSDKTIEKLYEFIDKPEKCPHGENINLK >Mature_148_residues MCIPCYLYFSFGGNLVSQNIEDYLETIFLFIKEKKRPVKTTELARLMNVQPAAVTSMAKKLSHDGLIHYEPYVGIYLDED GEEIAKNTLRKHRIIEYFLTEFLNLDLDFAKDEACKIEHVVSDKTIEKLYEFIDKPEKCPHGENINLK
Specific function: In the presence of manganese, it represses the manganese transporter mnth [C]
COG id: COG1321
COG function: function code K; Mn-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH dtxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787038, Length=116, Percent_Identity=34.4827586206897, Blast_Score=66, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001367 - InterPro: IPR022689 - InterPro: IPR022687 - InterPro: IPR011991 [H]
Pfam domain/function: PF02742 Fe_dep_repr_C; PF01325 Fe_dep_repress [H]
EC number: NA
Molecular weight: Translated: 17238; Mature: 17238
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS50944 HTH_DTXR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCIPCYLYFSFGGNLVSQNIEDYLETIFLFIKEKKRPVKTTELARLMNVQPAAVTSMAKK CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHH LSHDGLIHYEPYVGIYLDEDGEEIAKNTLRKHRIIEYFLTEFLNLDLDFAKDEACKIEHV HCCCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH VSDKTIEKLYEFIDKPEKCPHGENINLK HHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MCIPCYLYFSFGGNLVSQNIEDYLETIFLFIKEKKRPVKTTELARLMNVQPAAVTSMAKK CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHH LSHDGLIHYEPYVGIYLDEDGEEIAKNTLRKHRIIEYFLTEFLNLDLDFAKDEACKIEHV HCCCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH VSDKTIEKLYEFIDKPEKCPHGENINLK HHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]