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The map label for this gene is 150400247

Identifier: 150400247

GI number: 150400247

Start: 1526070

End: 1526534

Strand: Reverse

Name: 150400247

Synonym: Mevan_1508

Alternate gene names: NA

Gene position: 1526534-1526070 (Counterclockwise)

Preceding gene: 150400253

Following gene: 150400246

Centisome position: 88.75

GC content: 34.41

Gene sequence:

>465_bases
ATGATAGGTAGAGATCCAAAAGATCCTTTTTCAGAAATATTTAAAATGTTTGGAATGAGTTTTCCAATGGAAGGATTTGG
AGGCCCAATGACGAGAACCATGTTTCAAATGGGTACCGCAGGTTTGGAGATAAGTGGAAAAGGATACATGCCACTAACAA
TAATTGAAGGAGACGAATCAATAAAAATAATTGCATTAATTCCAGGAGTAAATAAATCAGACATTGTGATAAATGCCGTT
GGCGACACTCTTGAATTAAGGGCTAAAAAAGCCCCTCTTGCAATAATGGAGTCTGAAAAAATTATATATTCAGAAGTTGC
GGAAGATGAAGAAATATATAAAACAATAAAATTACCTGCACACGTTAAGGAAGGTAAGTCCTCTGCAAAATTTGAAAATG
GAATACTAACTATAGCTCTTCCAAAGACTGAAAAGTCCCTTAGAACTGGAATTGATATTGAATAA

Upstream 100 bases:

>100_bases
ATAACGTTCATCATATTTAATTATCTATTCATATAAAAACACGGTAGAAAAGTATATATAGAATTTCAAAGTAATTTTAA
TTAGAAACGGGGTGATACAT

Downstream 100 bases:

>100_bases
TTAAAACTAATTTTAAATTAAGTATTTTAAAATGCTTAAAATTAAATCTAAGTAATTTATAATTTTAAATTTGTTAAAAG
TCTTTTTTATTTTTATTTTT

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIGRDPKDPFSEIFKMFGMSFPMEGFGGPMTRTMFQMGTAGLEISGKGYMPLTIIEGDESIKIIALIPGVNKSDIVINAV
GDTLELRAKKAPLAIMESEKIIYSEVAEDEEIYKTIKLPAHVKEGKSSAKFENGILTIALPKTEKSLRTGIDIE

Sequences:

>Translated_154_residues
MIGRDPKDPFSEIFKMFGMSFPMEGFGGPMTRTMFQMGTAGLEISGKGYMPLTIIEGDESIKIIALIPGVNKSDIVINAV
GDTLELRAKKAPLAIMESEKIIYSEVAEDEEIYKTIKLPAHVKEGKSSAKFENGILTIALPKTEKSLRTGIDIE
>Mature_154_residues
MIGRDPKDPFSEIFKMFGMSFPMEGFGGPMTRTMFQMGTAGLEISGKGYMPLTIIEGDESIKIIALIPGVNKSDIVINAV
GDTLELRAKKAPLAIMESEKIIYSEVAEDEEIYKTIKLPAHVKEGKSSAKFENGILTIALPKTEKSLRTGIDIE

Specific function: Chaperone that confers thermal protection to other proteins [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16857; Mature: 16857

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRDPKDPFSEIFKMFGMSFPMEGFGGPMTRTMFQMGTAGLEISGKGYMPLTIIEGDES
CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCEEEEEEECCCC
IKIIALIPGVNKSDIVINAVGDTLELRAKKAPLAIMESEKIIYSEVAEDEEIYKTIKLPA
EEEEEEECCCCCCCEEEEECCCCEEEEECCCCEEEECCCCEEEHHHCCHHHHHHHHCCCC
HVKEGKSSAKFENGILTIALPKTEKSLRTGIDIE
HHCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCC
>Mature Secondary Structure
MIGRDPKDPFSEIFKMFGMSFPMEGFGGPMTRTMFQMGTAGLEISGKGYMPLTIIEGDES
CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCEEEEEEECCCC
IKIIALIPGVNKSDIVINAVGDTLELRAKKAPLAIMESEKIIYSEVAEDEEIYKTIKLPA
EEEEEEECCCCCCCEEEEECCCCEEEEECCCCEEEECCCCEEEHHHCCHHHHHHHHCCCC
HVKEGKSSAKFENGILTIALPKTEKSLRTGIDIE
HHCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9689045; 9707123 [H]