Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150400253

Identifier: 150400253

GI number: 150400253

Start: 1533012

End: 1533995

Strand: Reverse

Name: 150400253

Synonym: Mevan_1514

Alternate gene names: NA

Gene position: 1533995-1533012 (Counterclockwise)

Preceding gene: 150400258

Following gene: 150400247

Centisome position: 89.18

GC content: 30.89

Gene sequence:

>984_bases
ATGAGAGAAGTAATGCTTTCTGAATGCATGAATCTGCTTTATGAATCAAATTTTGTAATATCAAAGCCTTTCGGAAGGTC
ATGTTTTGATTTAATTGCAAAAAAAGCAGATTTAAAATTATTAATTAAGATTTTAAAAAATATCGATAGTTTAAGTACTG
AACAGTCCGAAGAACTTTTAAATATTGCAAGGATTCTTCAAGCCGTACCCTTAATTATTGGATCACGAACTAGAAATTCA
GTAATGGAAGAAGGAGCCGTTTACGAAAGATTTGGAATAAAAGCAGTTACTTTTTTGACATTTCAAGAACAAGTACGTGG
AATACCCCCAGTTGTTTACGCAAACCGTGGCGGTTTTTTTGTAAATATCGATGGAAAAGCCTTAAAAGAAACTCGTGAAA
AATTAAATATCTCTGTTGGTGAACTTGCAGAGTTTTCGAGGGTTTCAAGAAAAACAATATATAAATATGAACAAAATGAA
GCCAATCCTTCAGCAGAAGTTGCAATTAAAATTGAAGAGTATCTTGATGTTCCATTAATTAAGGGAATAAATATAACTGA
TTATTTTGAAGGAGTAAACTTACCTAAAAGCCGTGAAGAAGCTTTTGAAAAAATATTAAAGGAAGGAGAAGACTTCAAAG
TAAAAGTTATAGAGATACTTGGTGACATGGGATTTAACCTACTTGAAACTACAAAAGCTCCTTTTGATGCCGTTGCAGAG
GAGTCTAAGAATAAAGGCGATGAAGTACATAACGTGCTTTTTACCAATATTCAGGAGACTGAAAATGAAGAAATAAGAAA
AAAAGCAATAATTGTTGACGAAATTTCAAAGATATTTAACAGTCACTCGTTATTAATTCTTGAAACTAGGAAAAATGAAG
ATAAGAAGATAATGAGTATGAGTATAAGGGAACTTGAAAAAATGGGCGATACTGTAGATTTAATTGATTTTATAGAAAAA
AGAAAGAAATCAAAGGATATTTAA

Upstream 100 bases:

>100_bases
TTACCTTAAACTATTTTTGTACATATTAATACTTTTCCGTAAGAAATATATATTTGGCGGATTAGACTTAGAATATATAA
ATTGTAAAATCTGGTAAAAT

Downstream 100 bases:

>100_bases
TTAAATTTAAAAATTTTTAAATAAAATATTTTTTAAACTTCAAATTTACTTAAAATAAATAAAAAAGTTTTTTTATTAAT
ACTTAATTAATTAATTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MREVMLSECMNLLYESNFVISKPFGRSCFDLIAKKADLKLLIKILKNIDSLSTEQSEELLNIARILQAVPLIIGSRTRNS
VMEEGAVYERFGIKAVTFLTFQEQVRGIPPVVYANRGGFFVNIDGKALKETREKLNISVGELAEFSRVSRKTIYKYEQNE
ANPSAEVAIKIEEYLDVPLIKGINITDYFEGVNLPKSREEAFEKILKEGEDFKVKVIEILGDMGFNLLETTKAPFDAVAE
ESKNKGDEVHNVLFTNIQETENEEIRKKAIIVDEISKIFNSHSLLILETRKNEDKKIMSMSIRELEKMGDTVDLIDFIEK
RKKSKDI

Sequences:

>Translated_327_residues
MREVMLSECMNLLYESNFVISKPFGRSCFDLIAKKADLKLLIKILKNIDSLSTEQSEELLNIARILQAVPLIIGSRTRNS
VMEEGAVYERFGIKAVTFLTFQEQVRGIPPVVYANRGGFFVNIDGKALKETREKLNISVGELAEFSRVSRKTIYKYEQNE
ANPSAEVAIKIEEYLDVPLIKGINITDYFEGVNLPKSREEAFEKILKEGEDFKVKVIEILGDMGFNLLETTKAPFDAVAE
ESKNKGDEVHNVLFTNIQETENEEIRKKAIIVDEISKIFNSHSLLILETRKNEDKKIMSMSIRELEKMGDTVDLIDFIEK
RKKSKDI
>Mature_327_residues
MREVMLSECMNLLYESNFVISKPFGRSCFDLIAKKADLKLLIKILKNIDSLSTEQSEELLNIARILQAVPLIIGSRTRNS
VMEEGAVYERFGIKAVTFLTFQEQVRGIPPVVYANRGGFFVNIDGKALKETREKLNISVGELAEFSRVSRKTIYKYEQNE
ANPSAEVAIKIEEYLDVPLIKGINITDYFEGVNLPKSREEAFEKILKEGEDFKVKVIEILGDMGFNLLETTKAPFDAVAE
ESKNKGDEVHNVLFTNIQETENEEIRKKAIIVDEISKIFNSHSLLILETRKNEDKKIMSMSIRELEKMGDTVDLIDFIEK
RKKSKDI

Specific function: Unknown

COG id: COG1395

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1514_METVS (A6USD6)

Other databases:

- EMBL:   CP000742
- RefSeq:   YP_001324020.1
- ProteinModelPortal:   A6USD6
- STRING:   A6USD6
- GeneID:   5324555
- GenomeReviews:   CP000742_GR
- KEGG:   mvn:Mevan_1514
- eggNOG:   arNOG05915
- HOGENOM:   HBG626911
- OMA:   YERFGIY
- ProtClustDB:   PRK04140
- HAMAP:   MF_00584
- InterPro:   IPR001387
- InterPro:   IPR020886
- InterPro:   IPR010982
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 37329; Mature: 37329

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREVMLSECMNLLYESNFVISKPFGRSCFDLIAKKADLKLLIKILKNIDSLSTEQSEELL
CCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
NIARILQAVPLIIGSRTRNSVMEEGAVYERFGIKAVTFLTFQEQVRGIPPVVYANRGGFF
HHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCEE
VNIDGKALKETREKLNISVGELAEFSRVSRKTIYKYEQNEANPSAEVAIKIEEYLDVPLI
EEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCHH
KGINITDYFEGVNLPKSREEAFEKILKEGEDFKVKVIEILGDMGFNLLETTKAPFDAVAE
CCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCCHHHHHCCCCHHHHHH
ESKNKGDEVHNVLFTNIQETENEEIRKKAIIVDEISKIFNSHSLLILETRKNEDKKIMSM
HHCCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
SIRELEKMGDTVDLIDFIEKRKKSKDI
HHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MREVMLSECMNLLYESNFVISKPFGRSCFDLIAKKADLKLLIKILKNIDSLSTEQSEELL
CCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
NIARILQAVPLIIGSRTRNSVMEEGAVYERFGIKAVTFLTFQEQVRGIPPVVYANRGGFF
HHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCEE
VNIDGKALKETREKLNISVGELAEFSRVSRKTIYKYEQNEANPSAEVAIKIEEYLDVPLI
EEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCHH
KGINITDYFEGVNLPKSREEAFEKILKEGEDFKVKVIEILGDMGFNLLETTKAPFDAVAE
CCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCCHHHHHCCCCHHHHHH
ESKNKGDEVHNVLFTNIQETENEEIRKKAIIVDEISKIFNSHSLLILETRKNEDKKIMSM
HHCCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
SIRELEKMGDTVDLIDFIEKRKKSKDI
HHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA