| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400253
Identifier: 150400253
GI number: 150400253
Start: 1533012
End: 1533995
Strand: Reverse
Name: 150400253
Synonym: Mevan_1514
Alternate gene names: NA
Gene position: 1533995-1533012 (Counterclockwise)
Preceding gene: 150400258
Following gene: 150400247
Centisome position: 89.18
GC content: 30.89
Gene sequence:
>984_bases ATGAGAGAAGTAATGCTTTCTGAATGCATGAATCTGCTTTATGAATCAAATTTTGTAATATCAAAGCCTTTCGGAAGGTC ATGTTTTGATTTAATTGCAAAAAAAGCAGATTTAAAATTATTAATTAAGATTTTAAAAAATATCGATAGTTTAAGTACTG AACAGTCCGAAGAACTTTTAAATATTGCAAGGATTCTTCAAGCCGTACCCTTAATTATTGGATCACGAACTAGAAATTCA GTAATGGAAGAAGGAGCCGTTTACGAAAGATTTGGAATAAAAGCAGTTACTTTTTTGACATTTCAAGAACAAGTACGTGG AATACCCCCAGTTGTTTACGCAAACCGTGGCGGTTTTTTTGTAAATATCGATGGAAAAGCCTTAAAAGAAACTCGTGAAA AATTAAATATCTCTGTTGGTGAACTTGCAGAGTTTTCGAGGGTTTCAAGAAAAACAATATATAAATATGAACAAAATGAA GCCAATCCTTCAGCAGAAGTTGCAATTAAAATTGAAGAGTATCTTGATGTTCCATTAATTAAGGGAATAAATATAACTGA TTATTTTGAAGGAGTAAACTTACCTAAAAGCCGTGAAGAAGCTTTTGAAAAAATATTAAAGGAAGGAGAAGACTTCAAAG TAAAAGTTATAGAGATACTTGGTGACATGGGATTTAACCTACTTGAAACTACAAAAGCTCCTTTTGATGCCGTTGCAGAG GAGTCTAAGAATAAAGGCGATGAAGTACATAACGTGCTTTTTACCAATATTCAGGAGACTGAAAATGAAGAAATAAGAAA AAAAGCAATAATTGTTGACGAAATTTCAAAGATATTTAACAGTCACTCGTTATTAATTCTTGAAACTAGGAAAAATGAAG ATAAGAAGATAATGAGTATGAGTATAAGGGAACTTGAAAAAATGGGCGATACTGTAGATTTAATTGATTTTATAGAAAAA AGAAAGAAATCAAAGGATATTTAA
Upstream 100 bases:
>100_bases TTACCTTAAACTATTTTTGTACATATTAATACTTTTCCGTAAGAAATATATATTTGGCGGATTAGACTTAGAATATATAA ATTGTAAAATCTGGTAAAAT
Downstream 100 bases:
>100_bases TTAAATTTAAAAATTTTTAAATAAAATATTTTTTAAACTTCAAATTTACTTAAAATAAATAAAAAAGTTTTTTTATTAAT ACTTAATTAATTAATTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MREVMLSECMNLLYESNFVISKPFGRSCFDLIAKKADLKLLIKILKNIDSLSTEQSEELLNIARILQAVPLIIGSRTRNS VMEEGAVYERFGIKAVTFLTFQEQVRGIPPVVYANRGGFFVNIDGKALKETREKLNISVGELAEFSRVSRKTIYKYEQNE ANPSAEVAIKIEEYLDVPLIKGINITDYFEGVNLPKSREEAFEKILKEGEDFKVKVIEILGDMGFNLLETTKAPFDAVAE ESKNKGDEVHNVLFTNIQETENEEIRKKAIIVDEISKIFNSHSLLILETRKNEDKKIMSMSIRELEKMGDTVDLIDFIEK RKKSKDI
Sequences:
>Translated_327_residues MREVMLSECMNLLYESNFVISKPFGRSCFDLIAKKADLKLLIKILKNIDSLSTEQSEELLNIARILQAVPLIIGSRTRNS VMEEGAVYERFGIKAVTFLTFQEQVRGIPPVVYANRGGFFVNIDGKALKETREKLNISVGELAEFSRVSRKTIYKYEQNE ANPSAEVAIKIEEYLDVPLIKGINITDYFEGVNLPKSREEAFEKILKEGEDFKVKVIEILGDMGFNLLETTKAPFDAVAE ESKNKGDEVHNVLFTNIQETENEEIRKKAIIVDEISKIFNSHSLLILETRKNEDKKIMSMSIRELEKMGDTVDLIDFIEK RKKSKDI >Mature_327_residues MREVMLSECMNLLYESNFVISKPFGRSCFDLIAKKADLKLLIKILKNIDSLSTEQSEELLNIARILQAVPLIIGSRTRNS VMEEGAVYERFGIKAVTFLTFQEQVRGIPPVVYANRGGFFVNIDGKALKETREKLNISVGELAEFSRVSRKTIYKYEQNE ANPSAEVAIKIEEYLDVPLIKGINITDYFEGVNLPKSREEAFEKILKEGEDFKVKVIEILGDMGFNLLETTKAPFDAVAE ESKNKGDEVHNVLFTNIQETENEEIRKKAIIVDEISKIFNSHSLLILETRKNEDKKIMSMSIRELEKMGDTVDLIDFIEK RKKSKDI
Specific function: Unknown
COG id: COG1395
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1514_METVS (A6USD6)
Other databases:
- EMBL: CP000742 - RefSeq: YP_001324020.1 - ProteinModelPortal: A6USD6 - STRING: A6USD6 - GeneID: 5324555 - GenomeReviews: CP000742_GR - KEGG: mvn:Mevan_1514 - eggNOG: arNOG05915 - HOGENOM: HBG626911 - OMA: YERFGIY - ProtClustDB: PRK04140 - HAMAP: MF_00584 - InterPro: IPR001387 - InterPro: IPR020886 - InterPro: IPR010982 - SMART: SM00530
Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA
EC number: NA
Molecular weight: Translated: 37329; Mature: 37329
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREVMLSECMNLLYESNFVISKPFGRSCFDLIAKKADLKLLIKILKNIDSLSTEQSEELL CCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH NIARILQAVPLIIGSRTRNSVMEEGAVYERFGIKAVTFLTFQEQVRGIPPVVYANRGGFF HHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCEE VNIDGKALKETREKLNISVGELAEFSRVSRKTIYKYEQNEANPSAEVAIKIEEYLDVPLI EEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCHH KGINITDYFEGVNLPKSREEAFEKILKEGEDFKVKVIEILGDMGFNLLETTKAPFDAVAE CCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCCHHHHHCCCCHHHHHH ESKNKGDEVHNVLFTNIQETENEEIRKKAIIVDEISKIFNSHSLLILETRKNEDKKIMSM HHCCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH SIRELEKMGDTVDLIDFIEKRKKSKDI HHHHHHHCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MREVMLSECMNLLYESNFVISKPFGRSCFDLIAKKADLKLLIKILKNIDSLSTEQSEELL CCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH NIARILQAVPLIIGSRTRNSVMEEGAVYERFGIKAVTFLTFQEQVRGIPPVVYANRGGFF HHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCEE VNIDGKALKETREKLNISVGELAEFSRVSRKTIYKYEQNEANPSAEVAIKIEEYLDVPLI EEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCHH KGINITDYFEGVNLPKSREEAFEKILKEGEDFKVKVIEILGDMGFNLLETTKAPFDAVAE CCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCCHHHHHCCCCHHHHHH ESKNKGDEVHNVLFTNIQETENEEIRKKAIIVDEISKIFNSHSLLILETRKNEDKKIMSM HHCCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH SIRELEKMGDTVDLIDFIEKRKKSKDI HHHHHHHCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA