| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is cbiJ [H]
Identifier: 150400210
GI number: 150400210
Start: 1495079
End: 1495828
Strand: Reverse
Name: cbiJ [H]
Synonym: Mevan_1471
Alternate gene names: 150400210
Gene position: 1495828-1495079 (Counterclockwise)
Preceding gene: 150400211
Following gene: 150400206
Centisome position: 86.96
GC content: 28.4
Gene sequence:
>750_bases ATGAAGATATGGATTCGAGGCGGAACGAGCGATGCAGAAAAAATTTCAAAAGAAATTAAAAGAAATTTTAAAAATGTATT TTTAATCGTTACAACAACAACAGAACTTGGCGGGGAAATTGCGAAAAGTTATGCTGATTACGTAATTTCAGAAAAAATGA CTCGTGAAAATTTAAAAAAAATGCTTGTTGAAAACGAAATATCTATTTTTTTGGATGCAACGCACCCTTTTTCAGTGAAT GCAAGTGAAACGGGCATAAATGTTTCCAAAGAATTAAATATTCCATATATTCGTTATGAAAGACCCGTTGAAACTTTTGA AAACGCATATTATGTGGATAGTTTTGAAAAAGCATCTAAATTAGCGTTAAGTATTTCTAAAAAAAATATATTTTATATGG CAGGAATAAAAAATTTAGAATCGATTTCAAAATTAATCCCTTTAGAAAGATTAATTGTTAGAATACTGCCTGTATCGATA ATTGATGCTTTAAAAATTGTTCCTTCAAAAAATATAGTTGCAATGCAAGGCGTATTTTCTAAAGAACTAAATTATAATTT AATAAAGGATTATAATTGTGATGTAATTATAACTAAGGATAGCGGTAAAACTGGCGGAATTTATGAAAAAGTTTCTGGTG CACTGCTAGCAGGGGCAATCCCAATAATTGTAAACCGTCCAAAAATTGATTACCCGTTAAAATTTGAAAAAGTGGAAGAT TTGATAAATTATTTAAAAAAATTTAATTAA
Upstream 100 bases:
>100_bases TTCAGTATATTATACACTAATAAATAATGCTGATGGGAGTATTAGTATTGTTGAAATTTGAAAGTCATACTAAAATATTA AAGTATTTTACGTGAAAATC
Downstream 100 bases:
>100_bases GGTCACTGTAAGTGCTCTAAATCTTCATCATTTGGTATATATTTTATTAAATTTGGGCCAGGCCTAAGGCCATTTAGTAG TGCCTTATTGGTATAATTTA
Product: precorrin-6x reductase
Products: Precorrin 6A; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKIWIRGGTSDAEKISKEIKRNFKNVFLIVTTTTELGGEIAKSYADYVISEKMTRENLKKMLVENEISIFLDATHPFSVN ASETGINVSKELNIPYIRYERPVETFENAYYVDSFEKASKLALSISKKNIFYMAGIKNLESISKLIPLERLIVRILPVSI IDALKIVPSKNIVAMQGVFSKELNYNLIKDYNCDVIITKDSGKTGGIYEKVSGALLAGAIPIIVNRPKIDYPLKFEKVED LINYLKKFN
Sequences:
>Translated_249_residues MKIWIRGGTSDAEKISKEIKRNFKNVFLIVTTTTELGGEIAKSYADYVISEKMTRENLKKMLVENEISIFLDATHPFSVN ASETGINVSKELNIPYIRYERPVETFENAYYVDSFEKASKLALSISKKNIFYMAGIKNLESISKLIPLERLIVRILPVSI IDALKIVPSKNIVAMQGVFSKELNYNLIKDYNCDVIITKDSGKTGGIYEKVSGALLAGAIPIIVNRPKIDYPLKFEKVED LINYLKKFN >Mature_249_residues MKIWIRGGTSDAEKISKEIKRNFKNVFLIVTTTTELGGEIAKSYADYVISEKMTRENLKKMLVENEISIFLDATHPFSVN ASETGINVSKELNIPYIRYERPVETFENAYYVDSFEKASKLALSISKKNIFYMAGIKNLESISKLIPLERLIVRILPVSI IDALKIVPSKNIVAMQGVFSKELNYNLIKDYNCDVIITKDSGKTGGIYEKVSGALLAGAIPIIVNRPKIDYPLKFEKVED LINYLKKFN
Specific function: Catalyzes the reduction of the macrocycle of cobalt- precorrin-6X into cobalt-precorrin-6Y [H]
COG id: COG2099
COG function: function code H; Precorrin-6x reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin-6x reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003723 [H]
Pfam domain/function: PF02571 CbiJ [H]
EC number: 1.3.1.54
Molecular weight: Translated: 28173; Mature: 28173
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS51014 COBK_CBIJ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIWIRGGTSDAEKISKEIKRNFKNVFLIVTTTTELGGEIAKSYADYVISEKMTRENLKK CEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH MLVENEISIFLDATHPFSVNASETGINVSKELNIPYIRYERPVETFENAYYVDSFEKASK HHHHCCEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEECCCHHHHCCEEEECCHHHHHH LALSISKKNIFYMAGIKNLESISKLIPLERLIVRILPVSIIDALKIVPSKNIVAMQGVFS HEEEEECCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHH KELNYNLIKDYNCDVIITKDSGKTGGIYEKVSGALLAGAIPIIVNRPKIDYPLKFEKVED HCCCCCEEECCCCCEEEECCCCCCCCHHHHHCCHHHHCCEEEEEECCCCCCCCCHHHHHH LINYLKKFN HHHHHHHCC >Mature Secondary Structure MKIWIRGGTSDAEKISKEIKRNFKNVFLIVTTTTELGGEIAKSYADYVISEKMTRENLKK CEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH MLVENEISIFLDATHPFSVNASETGINVSKELNIPYIRYERPVETFENAYYVDSFEKASK HHHHCCEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEECCCHHHHCCEEEECCHHHHHH LALSISKKNIFYMAGIKNLESISKLIPLERLIVRILPVSIIDALKIVPSKNIVAMQGVFS HEEEEECCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHH KELNYNLIKDYNCDVIITKDSGKTGGIYEKVSGALLAGAIPIIVNRPKIDYPLKFEKVED HCCCCCEEECCCCCEEEECCCCCCCCHHHHHCCHHHHCCEEEEEECCCCCCCCCHHHHHH LINYLKKFN HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Precorrin 6B; NADP+
Specific reaction: precorrin-6B + NADP+ = precorrin-6A + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]