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The map label for this gene is gap

Identifier: 150400078

GI number: 150400078

Start: 1361879

End: 1362901

Strand: Reverse

Name: gap

Synonym: Mevan_1336

Alternate gene names: 150400078

Gene position: 1362901-1361879 (Counterclockwise)

Preceding gene: 150400084

Following gene: 150400077

Centisome position: 79.24

GC content: 34.21

Gene sequence:

>1023_bases
ATGGTTGGAGTATTAGTAAATGGTTATGGCTCTATCGGAAAAAGAGTTGCTGATGCAGTAGCTAAACAGGATGATATGAA
AGTAATCGGAGTTACAAAAACAAAACCTGATTTTGAAGCTAGGATGGCCGTTACAAAAGGTTACAAATTATTTGCTGCAA
TACCTGAAAAAAAGCACCTTTTTGAAGAAGCCAATATTCCCATTGAAGGAACTATTGAAGATATTATTGAAGATGCAGAT
ATCGTAGTTGATGGAGCTCCAAAAAAAATTGGAAAGGCTAACGTGGAAAACGTGTATAAAAAACATAATGTTAAAGCAAT
TATCCAAGGTGGGGAAAAAGCAAAAGATGCAGAGGACTCATTTAATTCCCTTTGGAGTTACAATAGATGTTATGGAAAAG
ATTACATAAGACTAGTATCTTGTAACACTACTGGACTATGTAGGACACTTTATGCAATTGATTCTATAACTGATATTTTA
AAAGCCAGAGTAGTTTTAGTAAGAAGGGCTGCTGACCCCAATGATATAAAAACAGGGCCCATAAATGCTATTATTCCTGA
CCCAGTAACAGTTCCATCCCATCACGGGCCAGATGTCGTTTCAGTAATACCAAAATTAGATGGAAAAATAATGACTTCTG
CAATAATTGTTCCAACTACCCTTATGCACATGCACTCTTTAATGGTTGAAACTACAGGAGTTACAAAAGATGCGGTTTTA
GATGCAATTGAAAAAACGCCAAGAATCATAAAAGTAAAAGCTAGTGAAGGAATTGATTCAACAGCAAAAATAATCGAATA
TTCAAGAGACCTTGGAAGATTAAGGTACGACTTAAATGAAATTGCAATTTGGGAAGAAAGCATTAATGTAGTAGATAATG
AAATTTATTTAATGCAAGCAATTCACCAAGAAAGTGATGTTATTCCTGAAAACATTGATTGTATTAGGGCAATGCTCGAA
ATGGAAGAAGATAACATAAAATCCATTGAAAAAACGAACAGAGCTCTTGGTCTTTTAAAATAA

Upstream 100 bases:

>100_bases
TTTAGGAGATTTGGATACCATATATATTTCAAAATAAGGGGAATTGATGATTAATAAATTACGTAACTTGAAATATAAAA
ATATTTAAAATGGTGGTTTT

Downstream 100 bases:

>100_bases
ATAAATAAATAAATAAATAAATAAATAAATAAATAAAGCTTTTTTATCTATTTTTACATTCTTAGATAAATTTACACGTG
ATATAATGAGATATTTAAGG

Product: glyceraldehyde-3-phosphate dehydrogenase

Products: NA

Alternate protein names: GAPDH; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MVGVLVNGYGSIGKRVADAVAKQDDMKVIGVTKTKPDFEARMAVTKGYKLFAAIPEKKHLFEEANIPIEGTIEDIIEDAD
IVVDGAPKKIGKANVENVYKKHNVKAIIQGGEKAKDAEDSFNSLWSYNRCYGKDYIRLVSCNTTGLCRTLYAIDSITDIL
KARVVLVRRAADPNDIKTGPINAIIPDPVTVPSHHGPDVVSVIPKLDGKIMTSAIIVPTTLMHMHSLMVETTGVTKDAVL
DAIEKTPRIIKVKASEGIDSTAKIIEYSRDLGRLRYDLNEIAIWEESINVVDNEIYLMQAIHQESDVIPENIDCIRAMLE
MEEDNIKSIEKTNRALGLLK

Sequences:

>Translated_340_residues
MVGVLVNGYGSIGKRVADAVAKQDDMKVIGVTKTKPDFEARMAVTKGYKLFAAIPEKKHLFEEANIPIEGTIEDIIEDAD
IVVDGAPKKIGKANVENVYKKHNVKAIIQGGEKAKDAEDSFNSLWSYNRCYGKDYIRLVSCNTTGLCRTLYAIDSITDIL
KARVVLVRRAADPNDIKTGPINAIIPDPVTVPSHHGPDVVSVIPKLDGKIMTSAIIVPTTLMHMHSLMVETTGVTKDAVL
DAIEKTPRIIKVKASEGIDSTAKIIEYSRDLGRLRYDLNEIAIWEESINVVDNEIYLMQAIHQESDVIPENIDCIRAMLE
MEEDNIKSIEKTNRALGLLK
>Mature_340_residues
MVGVLVNGYGSIGKRVADAVAKQDDMKVIGVTKTKPDFEARMAVTKGYKLFAAIPEKKHLFEEANIPIEGTIEDIIEDAD
IVVDGAPKKIGKANVENVYKKHNVKAIIQGGEKAKDAEDSFNSLWSYNRCYGKDYIRLVSCNTTGLCRTLYAIDSITDIL
KARVVLVRRAADPNDIKTGPINAIIPDPVTVPSHHGPDVVSVIPKLDGKIMTSAIIVPTTLMHMHSLMVETTGVTKDAVL
DAIEKTPRIIKVKASEGIDSTAKIIEYSRDLGRLRYDLNEIAIWEESINVVDNEIYLMQAIHQESDVIPENIDCIRAMLE
MEEDNIKSIEKTNRALGLLK

Specific function: Unknown

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): G3P_METVS (A6URW1)

Other databases:

- EMBL:   CP000742
- RefSeq:   YP_001323845.1
- ProteinModelPortal:   A6URW1
- SMR:   A6URW1
- STRING:   A6URW1
- GeneID:   5324771
- GenomeReviews:   CP000742_GR
- KEGG:   mvn:Mevan_1336
- eggNOG:   arNOG04694
- HOGENOM:   HBG392099
- OMA:   HHGPDVQ
- ProtClustDB:   PRK04207
- GO:   GO:0005737
- GO:   GO:0006096
- HAMAP:   MF_00559
- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006436
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720
- PIRSF:   PIRSF000149
- SMART:   SM00846
- TIGRFAMs:   TIGR01546

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N

EC number: =1.2.1.59

Molecular weight: Translated: 37554; Mature: 37554

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00071 GAPDH

Important sites: ACT_SITE 141-141 BINDING 111-111 BINDING 169-169 BINDING 303-303

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGVLVNGYGSIGKRVADAVAKQDDMKVIGVTKTKPDFEARMAVTKGYKLFAAIPEKKHL
CEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCEEEEECCCHHHH
FEEANIPIEGTIEDIIEDADIVVDGAPKKIGKANVENVYKKHNVKAIIQGGEKAKDAEDS
HHHCCCCCCCCHHHHHCCCCEEEECCCHHCCCCCHHHHHHHCCCEEEEECCCCCCCHHHH
FNSLWSYNRCYGKDYIRLVSCNTTGLCRTLYAIDSITDILKARVVLVRRAADPNDIKTGP
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
INAIIPDPVTVPSHHGPDVVSVIPKLDGKIMTSAIIVPTTLMHMHSLMVETTGVTKDAVL
CCEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DAIEKTPRIIKVKASEGIDSTAKIIEYSRDLGRLRYDLNEIAIWEESINVVDNEIYLMQA
HHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHCCHHHHHHH
IHQESDVIPENIDCIRAMLEMEEDNIKSIEKTNRALGLLK
HHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVGVLVNGYGSIGKRVADAVAKQDDMKVIGVTKTKPDFEARMAVTKGYKLFAAIPEKKHL
CEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCEEEEECCCHHHH
FEEANIPIEGTIEDIIEDADIVVDGAPKKIGKANVENVYKKHNVKAIIQGGEKAKDAEDS
HHHCCCCCCCCHHHHHCCCCEEEECCCHHCCCCCHHHHHHHCCCEEEEECCCCCCCHHHH
FNSLWSYNRCYGKDYIRLVSCNTTGLCRTLYAIDSITDILKARVVLVRRAADPNDIKTGP
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
INAIIPDPVTVPSHHGPDVVSVIPKLDGKIMTSAIIVPTTLMHMHSLMVETTGVTKDAVL
CCEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DAIEKTPRIIKVKASEGIDSTAKIIEYSRDLGRLRYDLNEIAIWEESINVVDNEIYLMQA
HHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHCCHHHHHHH
IHQESDVIPENIDCIRAMLEMEEDNIKSIEKTNRALGLLK
HHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA