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The map label for this gene is ycfF [C]

Identifier: 150400084

GI number: 150400084

Start: 1368744

End: 1369136

Strand: Reverse

Name: ycfF [C]

Synonym: Mevan_1342

Alternate gene names: 150400084

Gene position: 1369136-1368744 (Counterclockwise)

Preceding gene: 150400089

Following gene: 150400078

Centisome position: 79.6

GC content: 30.03

Gene sequence:

>393_bases
ATGTGTATTTTTTGTAGTATTGTTAAAGGAGATATTCCTGCAAGAATAATCTATGAAGACGAGAAATTTTTAGCATTTAT
GGATGCATTTCCAAGGGCTGTTGGACATACACTAATAATCCCTAAAGAACATTTTGAAACTTTTGACGAACTTCCAAAAG
AACTAGCGTGTGAAATGATGGAAGTAATTTATAAGGTTGTAAAACAGTTAAAAAACTTAAAAATGGATGGCTTTAATATT
TTAAATAATAATAAAAAAGTTTCCGGTCAAGAGGTTCCCCACGTTCATTTTCACATTATTCCAAGATATGAAAACGAGGG
ATATCCAGTTTACGTTTTAAAAGACCCTATAAACGTGGATTTAGATTCTATTTATGATAGAATAATGGAATAA

Upstream 100 bases:

>100_bases
ATATATATCATAGGTGTATTTAAGGCTGAATACTTTTTGAATCATATTTTTATACTTTTTAAATCATATTGCTATTTTGA
AAAATTTATGGTGAGTACCC

Downstream 100 bases:

>100_bases
TTTAAAAATTATTAAATTTTAAATCTTAGATTTTAAATTCTTTCATTTTTACTTAATGCAATAATGCCATTCATGAGCGA
AACTGCAATAGGGGTTCCCC

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MCIFCSIVKGDIPARIIYEDEKFLAFMDAFPRAVGHTLIIPKEHFETFDELPKELACEMMEVIYKVVKQLKNLKMDGFNI
LNNNKKVSGQEVPHVHFHIIPRYENEGYPVYVLKDPINVDLDSIYDRIME

Sequences:

>Translated_130_residues
MCIFCSIVKGDIPARIIYEDEKFLAFMDAFPRAVGHTLIIPKEHFETFDELPKELACEMMEVIYKVVKQLKNLKMDGFNI
LNNNKKVSGQEVPHVHFHIIPRYENEGYPVYVLKDPINVDLDSIYDRIME
>Mature_130_residues
MCIFCSIVKGDIPARIIYEDEKFLAFMDAFPRAVGHTLIIPKEHFETFDELPKELACEMMEVIYKVVKQLKNLKMDGFNI
LNNNKKVSGQEVPHVHFHIIPRYENEGYPVYVLKDPINVDLDSIYDRIME

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17506713, Length=102, Percent_Identity=35.2941176470588, Blast_Score=66, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320078, Length=114, Percent_Identity=39.4736842105263, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15206; Mature: 15206

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIFCSIVKGDIPARIIYEDEKFLAFMDAFPRAVGHTLIIPKEHFETFDELPKELACEMM
CEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHH
EVIYKVVKQLKNLKMDGFNILNNNKKVSGQEVPHVHFHIIPRYENEGYPVYVLKDPINVD
HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCC
LDSIYDRIME
HHHHHHHHCC
>Mature Secondary Structure
MCIFCSIVKGDIPARIIYEDEKFLAFMDAFPRAVGHTLIIPKEHFETFDELPKELACEMM
CEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHH
EVIYKVVKQLKNLKMDGFNILNNNKKVSGQEVPHVHFHIIPRYENEGYPVYVLKDPINVD
HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCC
LDSIYDRIME
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]