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The map label for this gene is ychE [C]

Identifier: 150400020

GI number: 150400020

Start: 1303990

End: 1304628

Strand: Reverse

Name: ychE [C]

Synonym: Mevan_1278

Alternate gene names: 150400020

Gene position: 1304628-1303990 (Counterclockwise)

Preceding gene: 150400021

Following gene: 150400017

Centisome position: 75.85

GC content: 32.39

Gene sequence:

>639_bases
ATGGACATTCACTTCACAATTTTAACATTCACTTCACTGTTTGCAATACTAAACCCTTTTGGAGTAATTCCTTCATATTT
ATGCCTTACAAGCCATTATTCAAAGGTTGAAAAACTAAAAGTAATTAGGAAATCCATGATTGCATCTTTCATTATATTGA
TGACATTTGCACTTCTTGGAAACCAGATAATCTCATTTTTTGGAATTTCAATTCCTGCAATCAAAATAACTGGAGGAGTT
TTATTATTCCTCATTGCACTCGATATGATTCAAGGAAATACCTCAAAGGTTGAAAAAGCCCCAAAATTAGAATCTCAGAT
AAAAACTTGCGAAAATATCGAAGAATTAAATGAAATTGCAATAATTCCACTTACAGTTCCCCTTTTTACGGGCCCTGGCT
CAATAAGTACCGTTATTGCAATGATGGCACAATCTCAGGATTTTGACAGTAAAATTTCGGTTGTAATTGCAATAGCACTT
TGTATAATATTTTCTTACTTCGTACTTAAGTTTTCAAAAGACCTTGAAAAAACTATTGGAAAAATAGGGTTTAAGATTCT
TACAAAAATGATGGGTCTTGTGCTTACTGCAATTTCAATCCAGATGGCCCTTGATGGTATTTTAATGGTTGTAAGATAA

Upstream 100 bases:

>100_bases
CACAATGTCTGCATTTTTAAATGGGAACTCTATCGACCTTTATCCCGGTATTAAAAGAAAAAATTATTTACCTTAAGAAA
AACGTATTAGATGTGAAAAT

Downstream 100 bases:

>100_bases
ATATTGATTAAATTTCTGATTGATGATATATACCTAACTAATTTAAAAAAATAACTTAAAAAATTAATATTTTTATTTTA
AAATACATTAAAAAATTAAA

Product: multiple antibiotic resistance (MarC)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MDIHFTILTFTSLFAILNPFGVIPSYLCLTSHYSKVEKLKVIRKSMIASFIILMTFALLGNQIISFFGISIPAIKITGGV
LLFLIALDMIQGNTSKVEKAPKLESQIKTCENIEELNEIAIIPLTVPLFTGPGSISTVIAMMAQSQDFDSKISVVIAIAL
CIIFSYFVLKFSKDLEKTIGKIGFKILTKMMGLVLTAISIQMALDGILMVVR

Sequences:

>Translated_212_residues
MDIHFTILTFTSLFAILNPFGVIPSYLCLTSHYSKVEKLKVIRKSMIASFIILMTFALLGNQIISFFGISIPAIKITGGV
LLFLIALDMIQGNTSKVEKAPKLESQIKTCENIEELNEIAIIPLTVPLFTGPGSISTVIAMMAQSQDFDSKISVVIAIAL
CIIFSYFVLKFSKDLEKTIGKIGFKILTKMMGLVLTAISIQMALDGILMVVR
>Mature_212_residues
MDIHFTILTFTSLFAILNPFGVIPSYLCLTSHYSKVEKLKVIRKSMIASFIILMTFALLGNQIISFFGISIPAIKITGGV
LLFLIALDMIQGNTSKVEKAPKLESQIKTCENIEELNEIAIIPLTVPLFTGPGSISTVIAMMAQSQDFDSKISVVIAIAL
CIIFSYFVLKFSKDLEKTIGKIGFKILTKMMGLVLTAISIQMALDGILMVVR

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=200, Percent_Identity=31, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1789842, Length=205, Percent_Identity=26.3414634146341, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1787809, Length=204, Percent_Identity=26.4705882352941, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 23274; Mature: 23274

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIHFTILTFTSLFAILNPFGVIPSYLCLTSHYSKVEKLKVIRKSMIASFIILMTFALLG
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQIISFFGISIPAIKITGGVLLFLIALDMIQGNTSKVEKAPKLESQIKTCENIEELNEIA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHEE
IIPLTVPLFTGPGSISTVIAMMAQSQDFDSKISVVIAIALCIIFSYFVLKFSKDLEKTIG
EEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIGFKILTKMMGLVLTAISIQMALDGILMVVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIHFTILTFTSLFAILNPFGVIPSYLCLTSHYSKVEKLKVIRKSMIASFIILMTFALLG
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQIISFFGISIPAIKITGGVLLFLIALDMIQGNTSKVEKAPKLESQIKTCENIEELNEIA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHEE
IIPLTVPLFTGPGSISTVIAMMAQSQDFDSKISVVIAIALCIIFSYFVLKFSKDLEKTIG
EEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIGFKILTKMMGLVLTAISIQMALDGILMVVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]