Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150400021

Identifier: 150400021

GI number: 150400021

Start: 1304653

End: 1305369

Strand: Reverse

Name: 150400021

Synonym: Mevan_1279

Alternate gene names: NA

Gene position: 1305369-1304653 (Counterclockwise)

Preceding gene: 150400022

Following gene: 150400020

Centisome position: 75.89

GC content: 34.45

Gene sequence:

>717_bases
ATGAAGTATATTTCCTCAATAAGCGTAGATATCTCTTCAAATGACGTTGAAACTAATCCGGTCGTTAATGAAAAAATTGA
GCGAGAACTTCAAGTAGAATTTTCAAAATTAGGCGTAAAATCAACTATTTCAAATGTTACTGGGGACGATATAGTAATAT
CTTCGTTTCTTTCAGAAGATAAGATAGAATTAGTAAATAAAATTGTGTTTAAATTGCTACATAAGCATGCTGAAGGATTT
GAAGATTTAAATGGGGTATCAAATACTCCTGAAGATGCAGGGGAAGGTGTTTCTTACGCCATTGCAAAAACCAATTCTGA
ATATGGGGATTCAATAATAGTAAGTTTTGATACGTATTGCGGGGAGAGTTTTGTAAATAATGCAGCTCTTTTTGTCGAAG
AAATCGGGCAAAAATTTGGCTACGACACTTCTACAAGCGTTTCGAAATATCCTAAGGAAATTCCAGGAATAGGGTATTCC
GGAGCTACCACTGATGATCCAGTTGTTATAATTACGCTTAAAAACGTAAACGACCTTTCAAAAATTGCAGGACTTATCTA
TGGCGGTTTATTGGGGTTTGAAAACGTTTATTTCGTTGAGAAAGGTTCTCCAACAAACATTTTACCTCCGGGAGTAATAT
ACACAATGTCTGCATTTTTAAATGGGAACTCTATCGACCTTTATCCCGGTATTAAAAGAAAAAATTATTTACCTTAA

Upstream 100 bases:

>100_bases
CGGTTAAAAAATTTGATCAGTATTTTAAAAAGTCCCTAAACAACCATTCCATGAATATGGGTCTTTCAAAAACCATGCTA
TCCAAAAATCAGGTGAGTTT

Downstream 100 bases:

>100_bases
GAAAAACGTATTAGATGTGAAAATATGGACATTCACTTCACAATTTTAACATTCACTTCACTGTTTGCAATACTAAACCC
TTTTGGAGTAATTCCTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKYISSISVDISSNDVETNPVVNEKIERELQVEFSKLGVKSTISNVTGDDIVISSFLSEDKIELVNKIVFKLLHKHAEGF
EDLNGVSNTPEDAGEGVSYAIAKTNSEYGDSIIVSFDTYCGESFVNNAALFVEEIGQKFGYDTSTSVSKYPKEIPGIGYS
GATTDDPVVIITLKNVNDLSKIAGLIYGGLLGFENVYFVEKGSPTNILPPGVIYTMSAFLNGNSIDLYPGIKRKNYLP

Sequences:

>Translated_238_residues
MKYISSISVDISSNDVETNPVVNEKIERELQVEFSKLGVKSTISNVTGDDIVISSFLSEDKIELVNKIVFKLLHKHAEGF
EDLNGVSNTPEDAGEGVSYAIAKTNSEYGDSIIVSFDTYCGESFVNNAALFVEEIGQKFGYDTSTSVSKYPKEIPGIGYS
GATTDDPVVIITLKNVNDLSKIAGLIYGGLLGFENVYFVEKGSPTNILPPGVIYTMSAFLNGNSIDLYPGIKRKNYLP
>Mature_238_residues
MKYISSISVDISSNDVETNPVVNEKIERELQVEFSKLGVKSTISNVTGDDIVISSFLSEDKIELVNKIVFKLLHKHAEGF
EDLNGVSNTPEDAGEGVSYAIAKTNSEYGDSIIVSFDTYCGESFVNNAALFVEEIGQKFGYDTSTSVSKYPKEIPGIGYS
GATTDDPVVIITLKNVNDLSKIAGLIYGGLLGFENVYFVEKGSPTNILPPGVIYTMSAFLNGNSIDLYPGIKRKNYLP

Specific function: Unknown

COG id: COG4053

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH564 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012021 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25865; Mature: 25865

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYISSISVDISSNDVETNPVVNEKIERELQVEFSKLGVKSTISNVTGDDIVISSFLSED
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHCHH
KIELVNKIVFKLLHKHAEGFEDLNGVSNTPEDAGEGVSYAIAKTNSEYGDSIIVSFDTYC
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHCCCCEEEEEECCCCCCCEEEEEEHHHH
GESFVNNAALFVEEIGQKFGYDTSTSVSKYPKEIPGIGYSGATTDDPVVIITLKNVNDLS
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHH
KIAGLIYGGLLGFENVYFVEKGSPTNILPPGVIYTMSAFLNGNSIDLYPGIKRKNYLP
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MKYISSISVDISSNDVETNPVVNEKIERELQVEFSKLGVKSTISNVTGDDIVISSFLSED
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHCHH
KIELVNKIVFKLLHKHAEGFEDLNGVSNTPEDAGEGVSYAIAKTNSEYGDSIIVSFDTYC
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHCCCCEEEEEECCCCCCCEEEEEEHHHH
GESFVNNAALFVEEIGQKFGYDTSTSVSKYPKEIPGIGYSGATTDDPVVIITLKNVNDLS
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHH
KIAGLIYGGLLGFENVYFVEKGSPTNILPPGVIYTMSAFLNGNSIDLYPGIKRKNYLP
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]