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The map label for this gene is rpoP [H]

Identifier: 150400003

GI number: 150400003

Start: 1289775

End: 1289915

Strand: Reverse

Name: rpoP [H]

Synonym: Mevan_1261

Alternate gene names: 150400003

Gene position: 1289915-1289775 (Counterclockwise)

Preceding gene: 150400004

Following gene: 150400002

Centisome position: 74.99

GC content: 41.84

Gene sequence:

>141_bases
ATGGCAGAGTACAGGTGTTCCAACTGCGGAAAAATCGTCACTCTTGAGGAAATTGGATTAAAGGCAAAATGCCCTCACTG
TAGTAACAGGGTATTGATAAAATTGAGGCCCAGAGTAGTCAAGAAAGTACAGGCTAGATAA

Upstream 100 bases:

>100_bases
AAGGCTATCCGAAGAGTTATCGAAAGTAAAAGTAGAGAAATTTAATTTAATTATTTTTAAACCATTTATTTTTATTTTAA
GCTTTTTTTAGGTGGTATTT

Downstream 100 bases:

>100_bases
TGATAATTACAACTTCAAGAAAACCTTCACAGCGTACTAGAAGTTTTGTAAATGACCTTGCAAGAGTTTTCAACTTTGAA
GTCCAAAATCGGGGCAAAGT

Product: RNA polymerase Rbp10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 45

Protein sequence:

>46_residues
MAEYRCSNCGKIVTLEEIGLKAKCPHCSNRVLIKLRPRVVKKVQAR

Sequences:

>Translated_46_residues
MAEYRCSNCGKIVTLEEIGLKAKCPHCSNRVLIKLRPRVVKKVQAR
>Mature_45_residues
AEYRCSNCGKIVTLEEIGLKAKCPHCSNRVLIKLRPRVVKKVQAR

Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates [H]

COG id: COG1996

COG function: function code K; DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal rpoP/eukaryotic RPC10 RNA polymerase subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: =2.7.7.6 [H]

Molecular weight: Translated: 5240; Mature: 5109

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
10.9 %Cys+Met (Translated Protein)
8.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEYRCSNCGKIVTLEEIGLKAKCPHCSNRVLIKLRPRVVKKVQAR
CCCCCCCCCCCEEEHHCCCCCCCCCCCCCEEEEEECCHHHHHHCCC
>Mature Secondary Structure 
AEYRCSNCGKIVTLEEIGLKAKCPHCSNRVLIKLRPRVVKKVQAR
CCCCCCCCCCEEEHHCCCCCCCCCCCCCEEEEEECCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 11058130 [H]