Click here to switch to the map view.

The map label for this gene is 150399946

Identifier: 150399946

GI number: 150399946

Start: 1226605

End: 1227447

Strand: Reverse

Name: 150399946

Synonym: Mevan_1203

Alternate gene names: NA

Gene position: 1227447-1226605 (Counterclockwise)

Preceding gene: 150399951

Following gene: 150399943

Centisome position: 71.36

GC content: 29.54

Gene sequence:

>843_bases
TTGAATAAACTAAACGAATCTGATTTAAGTGTAACATTGAATATAAACTATAGGGATAAAGTAATTACTCCATCTCAAGC
TGAAATTTTGAAGTTAATACTTGAAACAAAATCACAAAATAAAGTTGCACAACTACTTGATATCCCCCCATCAACGGTAA
ATATACAGTTGAAAAGATTAGAGGCTAAATTAGGAGTTAATCTAGCGTATGCCTCTCCTGCAGGAACTGTTCTTTCAGAA
GAAGCTTACCAAATTGTAAAATATTATACTGCCATTAAAGAAAGGGTTTCTAAAACAAAGTTTATTGCGTGTGGGTTTGT
AAGTGGGGAGGTTGGAAAAATTCTTTTTGATGATGTGCTTGTTTCTTCATTTTCAAATATTTTAAAACTACATAAATCAA
ATCTTACCGATACAATTGGAATTGACGACCCGTACTGGAGTTACCGAATTGGAGACCCGATACCTGTTGCATACGACCAT
TTTTTAATGGTATCAAAAGGCGACTTCAACTTTAAAAATTTGCTTGGAGTAAATTTTTCTGCCCATAGAATCGTTTGGAA
AACGTTAAAAAATGAAAAAATTGATTTTAGGGTTTCAAAAGTCGTAAAAAATCCATTTTATGCGATAGACCTCCTTGAAG
AAGGATATAGCATGTTTATAAATAAATGTCTTTTAAGATATGTTAAAAAAGAGTATAATATAGAAACTCCCAATTTTTAT
GAAAAAACGAAATATACAATAAATTTTATTTCAAATGAAGAAAATTTTGAAGAAAATTTTGAAGATTTAGTTTTGAAAAA
ACATAATGAAATAAAATCGGCTGGTTTTGAACCAATATTATAA

Upstream 100 bases:

>100_bases
CCCTGATAGTTTAAAATACTTGAATTTATAATATTTATGTAGATTATGTAAATTTATTTAAAATTATACTGCTAATATTT
GGTTTTAAAAGGGATATTTT

Downstream 100 bases:

>100_bases
TAGTTTAGGGCCCCTAAATTCTACCGTATTAGTTTTAAAGTTATTTTTCTAATAACGGGTGATAAAAAGTACGCTGTTGG
AAATGCCACAATATATCCTA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNKLNESDLSVTLNINYRDKVITPSQAEILKLILETKSQNKVAQLLDIPPSTVNIQLKRLEAKLGVNLAYASPAGTVLSE
EAYQIVKYYTAIKERVSKTKFIACGFVSGEVGKILFDDVLVSSFSNILKLHKSNLTDTIGIDDPYWSYRIGDPIPVAYDH
FLMVSKGDFNFKNLLGVNFSAHRIVWKTLKNEKIDFRVSKVVKNPFYAIDLLEEGYSMFINKCLLRYVKKEYNIETPNFY
EKTKYTINFISNEENFEENFEDLVLKKHNEIKSAGFEPIL

Sequences:

>Translated_280_residues
MNKLNESDLSVTLNINYRDKVITPSQAEILKLILETKSQNKVAQLLDIPPSTVNIQLKRLEAKLGVNLAYASPAGTVLSE
EAYQIVKYYTAIKERVSKTKFIACGFVSGEVGKILFDDVLVSSFSNILKLHKSNLTDTIGIDDPYWSYRIGDPIPVAYDH
FLMVSKGDFNFKNLLGVNFSAHRIVWKTLKNEKIDFRVSKVVKNPFYAIDLLEEGYSMFINKCLLRYVKKEYNIETPNFY
EKTKYTINFISNEENFEENFEDLVLKKHNEIKSAGFEPIL
>Mature_280_residues
MNKLNESDLSVTLNINYRDKVITPSQAEILKLILETKSQNKVAQLLDIPPSTVNIQLKRLEAKLGVNLAYASPAGTVLSE
EAYQIVKYYTAIKERVSKTKFIACGFVSGEVGKILFDDVLVSSFSNILKLHKSNLTDTIGIDDPYWSYRIGDPIPVAYDH
FLMVSKGDFNFKNLLGVNFSAHRIVWKTLKNEKIDFRVSKVVKNPFYAIDLLEEGYSMFINKCLLRYVKKEYNIETPNFY
EKTKYTINFISNEENFEENFEDLVLKKHNEIKSAGFEPIL

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1 [H]

EC number: NA

Molecular weight: Translated: 32120; Mature: 32120

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLNESDLSVTLNINYRDKVITPSQAEILKLILETKSQNKVAQLLDIPPSTVNIQLKRL
CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEE
EAKLGVNLAYASPAGTVLSEEAYQIVKYYTAIKERVSKTKFIACGFVSGEVGKILFDDVL
HHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHH
VSSFSNILKLHKSNLTDTIGIDDPYWSYRIGDPIPVAYDHFLMVSKGDFNFKNLLGVNFS
HHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCHHHHEECCCC
AHRIVWKTLKNEKIDFRVSKVVKNPFYAIDLLEEGYSMFINKCLLRYVKKEYNIETPNFY
HHHHHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EKTKYTINFISNEENFEENFEDLVLKKHNEIKSAGFEPIL
CCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure
MNKLNESDLSVTLNINYRDKVITPSQAEILKLILETKSQNKVAQLLDIPPSTVNIQLKRL
CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEE
EAKLGVNLAYASPAGTVLSEEAYQIVKYYTAIKERVSKTKFIACGFVSGEVGKILFDDVL
HHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHH
VSSFSNILKLHKSNLTDTIGIDDPYWSYRIGDPIPVAYDHFLMVSKGDFNFKNLLGVNFS
HHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCHHHHEECCCC
AHRIVWKTLKNEKIDFRVSKVVKNPFYAIDLLEEGYSMFINKCLLRYVKKEYNIETPNFY
HHHHHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EKTKYTINFISNEENFEENFEDLVLKKHNEIKSAGFEPIL
CCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]