| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is comB [H]
Identifier: 150399909
GI number: 150399909
Start: 1180244
End: 1180990
Strand: Reverse
Name: comB [H]
Synonym: Mevan_1166
Alternate gene names: 150399909
Gene position: 1180990-1180244 (Counterclockwise)
Preceding gene: 150399912
Following gene: 150399908
Centisome position: 68.66
GC content: 29.99
Gene sequence:
>747_bases TTGAACGTTTCTATTTCTTATGATTTTCAATGCCAAGAAAAATATGGCTCAAGAGTTAATTTAGAAAATTCTTGTGCTGT TGTAATAGATGTTTTACGTGCATCTACCACAATTTGTACATTAATTGAGTTGTGCAATAAGATATATATAACAGACTGTA TCGAGAAAGCCAACAAAATCGAAAATTCTATAAAGATAGGGGAAAGAAACGGTAAAAAAATAGATGGCTTCAATTTTGGA AACTCCCCTGTTGAATTATTATCTAATAAATTAGAAATAAAAAAATACGTGGAAAATGGCGGAAATATTGTTCTTACAAC GACTAACGGAACACGGGTTCTTGAAAATATTTCTTCAAACTACACACTTATTGGCTCGATTACAAACGCTAAATATGTTT CTAAAAAAGCTTGTGAAATTGCTTTTAAAAGTAATAAAGACATAACTCTTGTTCCTGCACATAGGGGTGGAAAATTTGCA ATTGAAGATTACATATGTGCAGGATTAATTGCAGATTACATCTTAAAGTATTCTAAGGAAGAAATAGATTCAGAAAGTTT TGAAGGACTTATACCATCAAGAACCTTAACAAAAACAGACTGGGTGAGAAAAGTATTTGAGTCAAATTCTGCTAAAAATT TAAAAATCTTAGGCTACTATGAAGATATTTTATTTTCAGTTTCTAAAAACAGTCAAAAGTCCGTTGGAGTTTACGATAAA AGCTTAGGAATTATAACATCTATTTAA
Upstream 100 bases:
>100_bases TGCGAGTAGTATAATAGTTAGTATAAGAAGTACTAGAATAATTCCAAGATATTCAAAAATATTTATGTTACTTAAAACCA TTTTATCACGGGTGAGTAAA
Downstream 100 bases:
>100_bases TTTAGAAAATGATATATAATTAAAAAAGGCTTTTATAATTAATATTCTAACTTTTGCGGGGAATTATTTTAAACCCGCCA TTTTACCATTTAAGTTGGAC
Product: 2-phosphosulfolactate phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNVSISYDFQCQEKYGSRVNLENSCAVVIDVLRASTTICTLIELCNKIYITDCIEKANKIENSIKIGERNGKKIDGFNFG NSPVELLSNKLEIKKYVENGGNIVLTTTNGTRVLENISSNYTLIGSITNAKYVSKKACEIAFKSNKDITLVPAHRGGKFA IEDYICAGLIADYILKYSKEEIDSESFEGLIPSRTLTKTDWVRKVFESNSAKNLKILGYYEDILFSVSKNSQKSVGVYDK SLGIITSI
Sequences:
>Translated_248_residues MNVSISYDFQCQEKYGSRVNLENSCAVVIDVLRASTTICTLIELCNKIYITDCIEKANKIENSIKIGERNGKKIDGFNFG NSPVELLSNKLEIKKYVENGGNIVLTTTNGTRVLENISSNYTLIGSITNAKYVSKKACEIAFKSNKDITLVPAHRGGKFA IEDYICAGLIADYILKYSKEEIDSESFEGLIPSRTLTKTDWVRKVFESNSAKNLKILGYYEDILFSVSKNSQKSVGVYDK SLGIITSI >Mature_248_residues MNVSISYDFQCQEKYGSRVNLENSCAVVIDVLRASTTICTLIELCNKIYITDCIEKANKIENSIKIGERNGKKIDGFNFG NSPVELLSNKLEIKKYVENGGNIVLTTTNGTRVLENISSNYTLIGSITNAKYVSKKACEIAFKSNKDITLVPAHRGGKFA IEDYICAGLIADYILKYSKEEIDSESFEGLIPSRTLTKTDWVRKVFESNSAKNLKILGYYEDILFSVSKNSQKSVGVYDK SLGIITSI
Specific function: Hydrolyzes both enantiomers of 2-phosphosulfolactate. Able to hydrolyze both enantiomers of 2-hydroxycarboxylic acids with pseudosymmetric centers of inversion. Specifically hydrolyzes (S)-phospholactate and (S)-phosphoglycerate [H]
COG id: COG2045
COG function: function code HR; Phosphosulfolactate phosphohydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005238 - InterPro: IPR022995 [H]
Pfam domain/function: PF04029 2-ph_phosp [H]
EC number: =3.1.3.71 [H]
Molecular weight: Translated: 27582; Mature: 27582
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSISYDFQCQEKYGSRVNLENSCAVVIDVLRASTTICTLIELCNKIYITDCIEKANKI CCEEEEECEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENSIKIGERNGKKIDGFNFGNSPVELLSNKLEIKKYVENGGNIVLTTTNGTRVLENISSN HHHEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCC YTLIGSITNAKYVSKKACEIAFKSNKDITLVPAHRGGKFAIEDYICAGLIADYILKYSKE EEEEEECCCCHHHHHHHHEEEEECCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHH EIDSESFEGLIPSRTLTKTDWVRKVFESNSAKNLKILGYYEDILFSVSKNSQKSVGVYDK HCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCCCEEEC SLGIITSI CCCEEECC >Mature Secondary Structure MNVSISYDFQCQEKYGSRVNLENSCAVVIDVLRASTTICTLIELCNKIYITDCIEKANKI CCEEEEECEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENSIKIGERNGKKIDGFNFGNSPVELLSNKLEIKKYVENGGNIVLTTTNGTRVLENISSN HHHEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCC YTLIGSITNAKYVSKKACEIAFKSNKDITLVPAHRGGKFAIEDYICAGLIADYILKYSKE EEEEEECCCCHHHHHHHHEEEEECCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHH EIDSESFEGLIPSRTLTKTDWVRKVFESNSAKNLKILGYYEDILFSVSKNSQKSVGVYDK HCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCCCEEEC SLGIITSI CCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087; 11589710 [H]