| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is paaK [H]
Identifier: 150399908
GI number: 150399908
Start: 1178814
End: 1180115
Strand: Reverse
Name: paaK [H]
Synonym: Mevan_1165
Alternate gene names: 150399908
Gene position: 1180115-1178814 (Counterclockwise)
Preceding gene: 150399909
Following gene: 150399902
Centisome position: 68.61
GC content: 35.94
Gene sequence:
>1302_bases TTGATTTGGTCCAGAGAAGAAACTCTAGATAGAGAGGATATCGAAAAAATACAGCTTGAAAGATTAAAAAATGCTGTAAA ACGGGCCTATAATAACGTGCCCCTTTACAGGAACAAATTTGATAGCGTAAATTTAAAACCTGATGACATAAATTCGCTTG AAGACCTTAAAAAAGTTCCGTTTACAACTAAGGAAGATTTTAGGGAAAATTATCCGTTTAAAATGTTTGCTGTTCCAAAA AAAGAAATTATACGAATACACGGATCTTCCGGAACAACTGGAAAACCCACGGTTGTAGGATATACTAAAAAAGACATTGA AACATGGTCAGAACTCGTTGCACGAGTTATAAGTGCTACGGGAGTAACTAACGAAGATACTGCACAAGTAGCATTTGGAT ACGGGTTATTTACTGGAGGATTTGGACTTCACTACGGGCTTGAAAAAGTTGGGGTAACGGTAGTTCCAATGTCAAGTGGA AACACTGAAAAGCAGATAATGCTAATGAAAGATTTTGAAACTACGGTTTTAATATGCACTCCATCATATGCACTTCACAT TGCAGAAGTTGCTGAAAAAATGGGTATTGACCCTAAAAAAGATTTAAAAATAAAAATCGGTCTTTTTGGAGGGGAAGGTC TTTCAGAATCTGCCAGAAAAGAACTCGAATCACGATTTTTGATGCTTGCAACATCAAACTACGGAATGAGTGAATTAATG GGGCCAGGAGTTTCTGGAGAATGCGAATACAAGGTTGGTATGCATATTTCAGAAGATCATTTTATTGCAGAAATTATTGA CCCTAAAACAGGCGAAGTTTTGCCTGAAGGGGAAGTTGGAGAACTCGTAATTACTGCACTTACAAAAGAGGCACTCCCTG TTTTAAGATACCGGACTAAAGACCTGACGTCTTTAAATTATAAAAAATGCAAGTGTGGAAGAACTACTGTAAGAATGAAT AAAATTAAAGGTAGAAGCGACGACATGTTAATTATTAGGGGGGTAAATGTATTCCCTTCACAAATTGAAAGTGTACTTGA AAGTATTGAAGAAATTGGGCCACATTATGAAATAATTGTTACAAAAAAAGGCCATATGGATGAATTAACAATAAACATTG AGCTTGCCGATGGAAAGTTTCTTGAAACGTACCGCTGTCTTGAACAGATAAGTAAAAAAGTAGACCATAAGTTAAAAACT GTTTTAGGATTGAGTTCAAAAATAAATATAGCCCAACCCAGAACCTTAGAACGGTTTGAAGGAAAAGCAAGACGGGTAAA AGACTTAAGAGATAACGAATAA
Upstream 100 bases:
>100_bases GCTTTTATAATTAATATTCTAACTTTTGCGGGGAATTATTTTAAACCCGCCATTTTACCATTTAAGTTGGACTGCTAAAA ACGTAAAGGAGGAGACTAAA
Downstream 100 bases:
>100_bases TCCAATAAATTAAACTTTTTTAAAACATTTATATTAACTAAATTTTAACTAAATTTGATTATTTTTTAACATCATAATTT CTTTTTATGTTTTAAATTTT
Product: phenylacetate--CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MIWSREETLDREDIEKIQLERLKNAVKRAYNNVPLYRNKFDSVNLKPDDINSLEDLKKVPFTTKEDFRENYPFKMFAVPK KEIIRIHGSSGTTGKPTVVGYTKKDIETWSELVARVISATGVTNEDTAQVAFGYGLFTGGFGLHYGLEKVGVTVVPMSSG NTEKQIMLMKDFETTVLICTPSYALHIAEVAEKMGIDPKKDLKIKIGLFGGEGLSESARKELESRFLMLATSNYGMSELM GPGVSGECEYKVGMHISEDHFIAEIIDPKTGEVLPEGEVGELVITALTKEALPVLRYRTKDLTSLNYKKCKCGRTTVRMN KIKGRSDDMLIIRGVNVFPSQIESVLESIEEIGPHYEIIVTKKGHMDELTINIELADGKFLETYRCLEQISKKVDHKLKT VLGLSSKINIAQPRTLERFEGKARRVKDLRDNE
Sequences:
>Translated_433_residues MIWSREETLDREDIEKIQLERLKNAVKRAYNNVPLYRNKFDSVNLKPDDINSLEDLKKVPFTTKEDFRENYPFKMFAVPK KEIIRIHGSSGTTGKPTVVGYTKKDIETWSELVARVISATGVTNEDTAQVAFGYGLFTGGFGLHYGLEKVGVTVVPMSSG NTEKQIMLMKDFETTVLICTPSYALHIAEVAEKMGIDPKKDLKIKIGLFGGEGLSESARKELESRFLMLATSNYGMSELM GPGVSGECEYKVGMHISEDHFIAEIIDPKTGEVLPEGEVGELVITALTKEALPVLRYRTKDLTSLNYKKCKCGRTTVRMN KIKGRSDDMLIIRGVNVFPSQIESVLESIEEIGPHYEIIVTKKGHMDELTINIELADGKFLETYRCLEQISKKVDHKLKT VLGLSSKINIAQPRTLERFEGKARRVKDLRDNE >Mature_433_residues MIWSREETLDREDIEKIQLERLKNAVKRAYNNVPLYRNKFDSVNLKPDDINSLEDLKKVPFTTKEDFRENYPFKMFAVPK KEIIRIHGSSGTTGKPTVVGYTKKDIETWSELVARVISATGVTNEDTAQVAFGYGLFTGGFGLHYGLEKVGVTVVPMSSG NTEKQIMLMKDFETTVLICTPSYALHIAEVAEKMGIDPKKDLKIKIGLFGGEGLSESARKELESRFLMLATSNYGMSELM GPGVSGECEYKVGMHISEDHFIAEIIDPKTGEVLPEGEVGELVITALTKEALPVLRYRTKDLTSLNYKKCKCGRTTVRMN KIKGRSDDMLIIRGVNVFPSQIESVLESIEEIGPHYEIIVTKKGHMDELTINIELADGKFLETYRCLEQISKKVDHKLKT VLGLSSKINIAQPRTLERFEGKARRVKDLRDNE
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=426, Percent_Identity=48.5915492957746, Blast_Score=434, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 48740; Mature: 48740
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWSREETLDREDIEKIQLERLKNAVKRAYNNVPLYRNKFDSVNLKPDDINSLEDLKKVP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC FTTKEDFRENYPFKMFAVPKKEIIRIHGSSGTTGKPTVVGYTKKDIETWSELVARVISAT CCCHHHHHCCCCEEEEECCHHHEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHC GVTNEDTAQVAFGYGLFTGGFGLHYGLEKVGVTVVPMSSGNTEKQIMLMKDFETTVLICT CCCCCCCCEEEEEEHHHCCCCHHHCCHHHCCEEEEEECCCCCCEEEEEEECCCCEEEEEC PSYALHIAEVAEKMGIDPKKDLKIKIGLFGGEGLSESARKELESRFLMLATSNYGMSELM CCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCEEEEEECCCCHHHHC GPGVSGECEYKVGMHISEDHFIAEIIDPKTGEVLPEGEVGELVITALTKEALPVLRYRTK CCCCCCCEEEEECCEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC DLTSLNYKKCKCGRTTVRMNKIKGRSDDMLIIRGVNVFPSQIESVLESIEEIGPHYEIIV CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE TKKGHMDELTINIELADGKFLETYRCLEQISKKVDHKLKTVLGLSSKINIAQPRTLERFE ECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHC GKARRVKDLRDNE CHHHHHHHCCCCC >Mature Secondary Structure MIWSREETLDREDIEKIQLERLKNAVKRAYNNVPLYRNKFDSVNLKPDDINSLEDLKKVP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC FTTKEDFRENYPFKMFAVPKKEIIRIHGSSGTTGKPTVVGYTKKDIETWSELVARVISAT CCCHHHHHCCCCEEEEECCHHHEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHC GVTNEDTAQVAFGYGLFTGGFGLHYGLEKVGVTVVPMSSGNTEKQIMLMKDFETTVLICT CCCCCCCCEEEEEEHHHCCCCHHHCCHHHCCEEEEEECCCCCCEEEEEEECCCCEEEEEC PSYALHIAEVAEKMGIDPKKDLKIKIGLFGGEGLSESARKELESRFLMLATSNYGMSELM CCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCEEEEEECCCCHHHHC GPGVSGECEYKVGMHISEDHFIAEIIDPKTGEVLPEGEVGELVITALTKEALPVLRYRTK CCCCCCCEEEEECCEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC DLTSLNYKKCKCGRTTVRMNKIKGRSDDMLIIRGVNVFPSQIESVLESIEEIGPHYEIIV CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE TKKGHMDELTINIELADGKFLETYRCLEQISKKVDHKLKTVLGLSSKINIAQPRTLERFE ECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHC GKARRVKDLRDNE CHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]