| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399872
Identifier: 150399872
GI number: 150399872
Start: 1137199
End: 1138095
Strand: Reverse
Name: 150399872
Synonym: Mevan_1127
Alternate gene names: NA
Gene position: 1138095-1137199 (Counterclockwise)
Preceding gene: 150399874
Following gene: 150399871
Centisome position: 66.17
GC content: 27.31
Gene sequence:
>897_bases ATGCCTAAAACGGACTCAAAGCTTGATGATATTGAAAAGACTGTTGAATCTAAAAGTGCAGACTTAAAAAATAGTATTGA GCTGATTAATTTAAGCAATATTGTAGAAAAAATGGTTGAAATAAATGCCATTTTAAGAATTGAAAAAATATTTGAACAGA AAATTGTTGGAAAAAACCCTGTTGTTAATGTCATAGTAAATGACGGTACTGCTAAAGGTCTTTTATCACTCTGGACTGAA GAAATAAAGTTTTTAGAAGGTATTTTTGAAGGCGATGCAATTTTAATTGAAAACGCAAATGCTCCAAAAAAATTTAAAGA CAGAATTCACCTATCACTTTCCAAAAATGGAAAAGTATCAAAAATAGAGTCAAATTTACCAAAACTTGAAGAAATGTTAG AAAATTCAAATACTAAAAGAAGTGATTTTTCAAGAAAACTTATTTCTGAATTAAAAGAAGGGATCGGTGCTGAAATTAGG GGATTAATCGTTTCTATTCATTCAAAAAACCCTTATTTCCCAGTATGTGGCATATGTAACAAAAAAATGACTTTAAAAAA AGGATATGCAATATGTGGTTGCGGAAATAAGGTTGATGAAGAAGATGATAATCTAAAATGGTTATTTTTATGTAACTGTA CTGTTGATGATGGTACAAAAACTATTAGGGCTACTTTAAATAATAATACAAAATGCATTGACTTTAAAAAAATTAAAAAA ATGATAATTGATGATGAAGACATAATTTTAGAATTAAACCGCCAATTGCTTGGTTTAGATATTAATATATCTGGAATTAC GTTTTACGATGAATATTTAAAAGATATATCATTTAGAAGTAATTTTTGGAACAAAACCGACCCAAATACTGAATTTGAAT TACTGAATTTGAATTAA
Upstream 100 bases:
>100_bases TAATATTTTTAGAGGCCAATTTTACGTTTTAGCTTTTTAAATATGGGGTACAATAAAATAAAATCTTATAATATATATTT CAAACTAACTGGTGAATCAA
Downstream 100 bases:
>100_bases AAAATAAGGTTTATAAAATGTACACTTTTGAAAAAATAAATAATATTGGGCCTGAAGATATTGAGAAAAAAGTAGCTATT TTAGGAATTATAACTGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MPKTDSKLDDIEKTVESKSADLKNSIELINLSNIVEKMVEINAILRIEKIFEQKIVGKNPVVNVIVNDGTAKGLLSLWTE EIKFLEGIFEGDAILIENANAPKKFKDRIHLSLSKNGKVSKIESNLPKLEEMLENSNTKRSDFSRKLISELKEGIGAEIR GLIVSIHSKNPYFPVCGICNKKMTLKKGYAICGCGNKVDEEDDNLKWLFLCNCTVDDGTKTIRATLNNNTKCIDFKKIKK MIIDDEDIILELNRQLLGLDINISGITFYDEYLKDISFRSNFWNKTDPNTEFELLNLN
Sequences:
>Translated_298_residues MPKTDSKLDDIEKTVESKSADLKNSIELINLSNIVEKMVEINAILRIEKIFEQKIVGKNPVVNVIVNDGTAKGLLSLWTE EIKFLEGIFEGDAILIENANAPKKFKDRIHLSLSKNGKVSKIESNLPKLEEMLENSNTKRSDFSRKLISELKEGIGAEIR GLIVSIHSKNPYFPVCGICNKKMTLKKGYAICGCGNKVDEEDDNLKWLFLCNCTVDDGTKTIRATLNNNTKCIDFKKIKK MIIDDEDIILELNRQLLGLDINISGITFYDEYLKDISFRSNFWNKTDPNTEFELLNLN >Mature_297_residues PKTDSKLDDIEKTVESKSADLKNSIELINLSNIVEKMVEINAILRIEKIFEQKIVGKNPVVNVIVNDGTAKGLLSLWTEE IKFLEGIFEGDAILIENANAPKKFKDRIHLSLSKNGKVSKIESNLPKLEEMLENSNTKRSDFSRKLISELKEGIGAEIRG LIVSIHSKNPYFPVCGICNKKMTLKKGYAICGCGNKVDEEDDNLKWLFLCNCTVDDGTKTIRATLNNNTKCIDFKKIKKM IIDDEDIILELNRQLLGLDINISGITFYDEYLKDISFRSNFWNKTDPNTEFELLNLN
Specific function: Unknown
COG id: COG1599
COG function: function code L; Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33796; Mature: 33665
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTDSKLDDIEKTVESKSADLKNSIELINLSNIVEKMVEINAILRIEKIFEQKIVGKNP CCCCCCHHHHHHHHHHHHCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VVNVIVNDGTAKGLLSLWTEEIKFLEGIFEGDAILIENANAPKKFKDRIHLSLSKNGKVS EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCEEEEEECCCCCEE KIESNLPKLEEMLENSNTKRSDFSRKLISELKEGIGAEIRGLIVSIHSKNPYFPVCGICN HHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCC KKMTLKKGYAICGCGNKVDEEDDNLKWLFLCNCTVDDGTKTIRATLNNNTKCIDFKKIKK CCEECCCCEEEEECCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCEEEEHHHHHH MIIDDEDIILELNRQLLGLDINISGITFYDEYLKDISFRSNFWNKTDPNTEFELLNLN HHCCCCHHHEEECHHHEEEEEEECCEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC >Mature Secondary Structure PKTDSKLDDIEKTVESKSADLKNSIELINLSNIVEKMVEINAILRIEKIFEQKIVGKNP CCCCCHHHHHHHHHHHHCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VVNVIVNDGTAKGLLSLWTEEIKFLEGIFEGDAILIENANAPKKFKDRIHLSLSKNGKVS EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCEEEEEECCCCCEE KIESNLPKLEEMLENSNTKRSDFSRKLISELKEGIGAEIRGLIVSIHSKNPYFPVCGICN HHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCC KKMTLKKGYAICGCGNKVDEEDDNLKWLFLCNCTVDDGTKTIRATLNNNTKCIDFKKIKK CCEECCCCEEEEECCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCEEEEHHHHHH MIIDDEDIILELNRQLLGLDINISGITFYDEYLKDISFRSNFWNKTDPNTEFELLNLN HHCCCCHHHEEECHHHEEEEEEECCEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA