| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399861
Identifier: 150399861
GI number: 150399861
Start: 1129179
End: 1129718
Strand: Reverse
Name: 150399861
Synonym: Mevan_1116
Alternate gene names: NA
Gene position: 1129718-1129179 (Counterclockwise)
Preceding gene: 150399862
Following gene: 150399855
Centisome position: 65.68
GC content: 24.63
Gene sequence:
>540_bases ATGCCAAATTTTTATTCACACCTTGTTTTATCAAAAATAATTCTTGAAAAGGATTTTAAAAGTAATTTTGATAGTATGGA TTTAAATAACTTTTATTTCGGTTCGGTTTCACCAGACATTGGATATTTTTCAAAAATTGAACGAAAAATTACTCATTTTT ACGAAAAAAATCCTGAAAATTTTTTTGGAAAAGATAGTATCTTTGAAATATCTTTTTTAAAGGGGTATAATCTACATTTG CACTTTGACAATGTATGGAAATACGAAATAAGGCTGAAAAATGAAATAAGCATTGAAGAAAATTCTAAAATTTATGCCTA CCTTGACGAATTTCTTAAAAGTATGTTTAAATTGGATTTTGACTATTTTTTACCGCATGTTATTGGTGGAAATTGCGATT TTTTAAAAAAATTGGGTATTGAAAAAGAAATTTGTGAACGTTGGAAGAAAAAATCAATTTATAAAATTTCAGAATTTAAA ACTAACGAAAACTACCAAAAAGTAGTTGATGAATATTTAAAACTTTTAAAAGTCGATTGA
Upstream 100 bases:
>100_bases CATGGGATTATCAAATATATCAGGTACAAGGTTTGGAAATAAACTTTTAAAGTATGTTCCAGACAATAATAAGACTGATC ATTTAAAATAGGTTTAAAAG
Downstream 100 bases:
>100_bases GTTTTCATAGGACTTTAACGACAATTTACCTTTTTTATCGTCAAAAAGTAAACTTCATGCATATTAAAAAAATAAATTAG ATTTTAAATTTTTACTCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MPNFYSHLVLSKIILEKDFKSNFDSMDLNNFYFGSVSPDIGYFSKIERKITHFYEKNPENFFGKDSIFEISFLKGYNLHL HFDNVWKYEIRLKNEISIEENSKIYAYLDEFLKSMFKLDFDYFLPHVIGGNCDFLKKLGIEKEICERWKKKSIYKISEFK TNENYQKVVDEYLKLLKVD
Sequences:
>Translated_179_residues MPNFYSHLVLSKIILEKDFKSNFDSMDLNNFYFGSVSPDIGYFSKIERKITHFYEKNPENFFGKDSIFEISFLKGYNLHL HFDNVWKYEIRLKNEISIEENSKIYAYLDEFLKSMFKLDFDYFLPHVIGGNCDFLKKLGIEKEICERWKKKSIYKISEFK TNENYQKVVDEYLKLLKVD >Mature_178_residues PNFYSHLVLSKIILEKDFKSNFDSMDLNNFYFGSVSPDIGYFSKIERKITHFYEKNPENFFGKDSIFEISFLKGYNLHLH FDNVWKYEIRLKNEISIEENSKIYAYLDEFLKSMFKLDFDYFLPHVIGGNCDFLKKLGIEKEICERWKKKSIYKISEFKT NENYQKVVDEYLKLLKVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21595; Mature: 21464
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNFYSHLVLSKIILEKDFKSNFDSMDLNNFYFGSVSPDIGYFSKIERKITHFYEKNPEN CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCC FFGKDSIFEISFLKGYNLHLHFDNVWKYEIRLKNEISIEENSKIYAYLDEFLKSMFKLDF CCCCCCEEEEEEECCCEEEEEECCEEEEEEEECCEECCCCCCCHHHHHHHHHHHHHHHCH DYFLPHVIGGNCDFLKKLGIEKEICERWKKKSIYKISEFKTNENYQKVVDEYLKLLKVD HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCEEHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PNFYSHLVLSKIILEKDFKSNFDSMDLNNFYFGSVSPDIGYFSKIERKITHFYEKNPEN CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCC FFGKDSIFEISFLKGYNLHLHFDNVWKYEIRLKNEISIEENSKIYAYLDEFLKSMFKLDF CCCCCCEEEEEEECCCEEEEEECCEEEEEEEECCEECCCCCCCHHHHHHHHHHHHHHHCH DYFLPHVIGGNCDFLKKLGIEKEICERWKKKSIYKISEFKTNENYQKVVDEYLKLLKVD HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCEEHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA