| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is ydgM [C]
Identifier: 150399855
GI number: 150399855
Start: 1123431
End: 1123619
Strand: Reverse
Name: ydgM [C]
Synonym: Mevan_1110
Alternate gene names: 150399855
Gene position: 1123619-1123431 (Counterclockwise)
Preceding gene: 150399861
Following gene: 150399853
Centisome position: 65.32
GC content: 42.33
Gene sequence:
>189_bases ATGGTGTTCAAAGTAATCGAAGATGAGTGTATTGCATGTGGAGCATGTGTTCCTTCATGTCCGGTTGATGCAATTTCAGA AAAAGACGACGGTAAAGCAGTAATCGATGCTTCGAAATGCAACAGCTGCGGCGACTGCGTAGATATTTGCCCTGTTGACT GCATTAAAGAAGAAAAAGGATGCTGTTAA
Upstream 100 bases:
>100_bases TTTTTTATATAAAAAGAATTTGGCAATTAAAATAATTTACAAACATATAAAAATATGTAATATCAATCTTTAAACTTGAA AAATAAACATAGGTGTAATA
Downstream 100 bases:
>100_bases GCATTTTTTTTCTTTTACTCATGGTAATATAAAACTAAATGTATTTTTGCAGGGCTTATTCCTTTATTTTCGTAAGTATG AGCTTTATCTGCCATAAATC
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MVFKVIEDECIACGACVPSCPVDAISEKDDGKAVIDASKCNSCGDCVDICPVDCIKEEKGCC
Sequences:
>Translated_62_residues MVFKVIEDECIACGACVPSCPVDAISEKDDGKAVIDASKCNSCGDCVDICPVDCIKEEKGCC >Mature_62_residues MVFKVIEDECIACGACVPSCPVDAISEKDDGKAVIDASKCNSCGDCVDICPVDCIKEEKGCC
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6476; Mature: 6476
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
17.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 19.4 %Cys+Met (Translated Protein) 17.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 19.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFKVIEDECIACGACVPSCPVDAISEKDDGKAVIDASKCNSCGDCVDICPVDCIKEEKG CCEECCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCC CC CC >Mature Secondary Structure MVFKVIEDECIACGACVPSCPVDAISEKDDGKAVIDASKCNSCGDCVDICPVDCIKEEKG CCEECCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCC CC CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA