Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is ydgM [C]

Identifier: 150399855

GI number: 150399855

Start: 1123431

End: 1123619

Strand: Reverse

Name: ydgM [C]

Synonym: Mevan_1110

Alternate gene names: 150399855

Gene position: 1123619-1123431 (Counterclockwise)

Preceding gene: 150399861

Following gene: 150399853

Centisome position: 65.32

GC content: 42.33

Gene sequence:

>189_bases
ATGGTGTTCAAAGTAATCGAAGATGAGTGTATTGCATGTGGAGCATGTGTTCCTTCATGTCCGGTTGATGCAATTTCAGA
AAAAGACGACGGTAAAGCAGTAATCGATGCTTCGAAATGCAACAGCTGCGGCGACTGCGTAGATATTTGCCCTGTTGACT
GCATTAAAGAAGAAAAAGGATGCTGTTAA

Upstream 100 bases:

>100_bases
TTTTTTATATAAAAAGAATTTGGCAATTAAAATAATTTACAAACATATAAAAATATGTAATATCAATCTTTAAACTTGAA
AAATAAACATAGGTGTAATA

Downstream 100 bases:

>100_bases
GCATTTTTTTTCTTTTACTCATGGTAATATAAAACTAAATGTATTTTTGCAGGGCTTATTCCTTTATTTTCGTAAGTATG
AGCTTTATCTGCCATAAATC

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MVFKVIEDECIACGACVPSCPVDAISEKDDGKAVIDASKCNSCGDCVDICPVDCIKEEKGCC

Sequences:

>Translated_62_residues
MVFKVIEDECIACGACVPSCPVDAISEKDDGKAVIDASKCNSCGDCVDICPVDCIKEEKGCC
>Mature_62_residues
MVFKVIEDECIACGACVPSCPVDAISEKDDGKAVIDASKCNSCGDCVDICPVDCIKEEKGCC

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6476; Mature: 6476

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

17.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
19.4 %Cys+Met (Translated Protein)
17.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
19.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFKVIEDECIACGACVPSCPVDAISEKDDGKAVIDASKCNSCGDCVDICPVDCIKEEKG
CCEECCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCC
CC
CC
>Mature Secondary Structure
MVFKVIEDECIACGACVPSCPVDAISEKDDGKAVIDASKCNSCGDCVDICPVDCIKEEKG
CCEECCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCC
CC
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA