| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399783
Identifier: 150399783
GI number: 150399783
Start: 1055442
End: 1056338
Strand: Reverse
Name: 150399783
Synonym: Mevan_1035
Alternate gene names: NA
Gene position: 1056338-1055442 (Counterclockwise)
Preceding gene: 150399784
Following gene: 150399777
Centisome position: 61.41
GC content: 31.88
Gene sequence:
>897_bases ATGGATATGTCTGCATCAATATCCAGAATTTATAATTATTTAATTAAAAGAAACCTACGGATACTTAAAAAAACCGGTAA AAATGTAGATGAAAGAATATTTATTGGATTAATTTTTGTAGTACTGGTTTTACCAATATTACTTAGGATAATAATTGGTT TTACACTACAAACTACCATCATATTAACTCTTGTTTATTTAGGGAGTGTACTTGCAATTCCAAGTATAATGTATGAGTCA AAAATGGAAAAGTTTGATAGCAACCTTCCAAAAGCACTTTATGTAATGGTTCTATCATTGGATTCAGGTAGGTCAATTGT TGAAGCAATTAATGAAGTTATACGAAGTGGAATTCCTGAAGTAGATTCTGTATTTTCAAAAATAGTGCTGTTAATGACTG AAAAAAAGCTTAGTTTTGAAGATTCGATGATGCTTGTATCAAATTCACTTGATTCAAAACTTTTTAGACAAATTAGCAGG TTGATAATTGAAAATAGAAAATACGGCGGAGAACTTGCAAATACGTTAAAAAAGCTCGCTAAAACATTAGAGGATCTCCA AAATTTAAAATCACAGCTTATCAGCGTTACTGGAAACGGACTTGCAGTCGGCCTTGTAATATTATGTGGCGTAATTCCTG CAACTGCAGGATTAATTGGAGGATATTTAACAGTTATATCCCAATTAGCACCAACAATGCCATCAGTAGAACCGAACCAA ATTTCAAAAGCCATTGAAACCGTTCAAATGGGTTCTGGACTTTTTGGACTGTTATTTTCTGTTCCATTATTTGGATTAAA AATCAATAAAATGATTATAACTTGCGCTCTATGTATGTCTTTTGCAATTACTGCATTTTATGGAGTTTTAAGACTTACTG GACTACTGTTCGCCTAA
Upstream 100 bases:
>100_bases GATGGAATTATTAATGCTATTGACTTAGTAATGACTAAAATAGGGCTTTTATCTACCATAATTTTTACAATATTTATTAA AATGAAAATAGAGTGAAAAA
Downstream 100 bases:
>100_bases AATTACTTAAGTAAATTATCTACTTCATGATATAATAATAATACTTTATTTACTACATTAACATTAGTTCTTTTTCTAAA TTTATCAATTACTAATTCAA
Product: type II secretion system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTIILTLVYLGSVLAIPSIMYES KMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPEVDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISR LIIENRKYGGELANTLKKLAKTLEDLQNLKSQLISVTGNGLAVGLVILCGVIPATAGLIGGYLTVISQLAPTMPSVEPNQ ISKAIETVQMGSGLFGLLFSVPLFGLKINKMIITCALCMSFAITAFYGVLRLTGLLFA
Sequences:
>Translated_298_residues MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTIILTLVYLGSVLAIPSIMYES KMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPEVDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISR LIIENRKYGGELANTLKKLAKTLEDLQNLKSQLISVTGNGLAVGLVILCGVIPATAGLIGGYLTVISQLAPTMPSVEPNQ ISKAIETVQMGSGLFGLLFSVPLFGLKINKMIITCALCMSFAITAFYGVLRLTGLLFA >Mature_298_residues MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTIILTLVYLGSVLAIPSIMYES KMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPEVDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISR LIIENRKYGGELANTLKKLAKTLEDLQNLKSQLISVTGNGLAVGLVILCGVIPATAGLIGGYLTVISQLAPTMPSVEPNQ ISKAIETVQMGSGLFGLLFSVPLFGLKINKMIITCALCMSFAITAFYGVLRLTGLLFA
Specific function: Unknown
COG id: COG2064
COG function: function code NU; Flp pilus assembly protein TadC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018076 [H]
Pfam domain/function: PF00482 GSPII_F [H]
EC number: NA
Molecular weight: Translated: 32693; Mature: 32693
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTI CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTLVYLGSVLAIPSIMYESKMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCH VDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISRLIIENRKYGGELANTLKKLA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KTLEDLQNLKSQLISVTGNGLAVGLVILCGVIPATAGLIGGYLTVISQLAPTMPSVEPNQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH ISKAIETVQMGSGLFGLLFSVPLFGLKINKMIITCALCMSFAITAFYGVLRLTGLLFA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTI CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTLVYLGSVLAIPSIMYESKMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCH VDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISRLIIENRKYGGELANTLKKLA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KTLEDLQNLKSQLISVTGNGLAVGLVILCGVIPATAGLIGGYLTVISQLAPTMPSVEPNQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH ISKAIETVQMGSGLFGLLFSVPLFGLKINKMIITCALCMSFAITAFYGVLRLTGLLFA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]