Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

Click here to switch to the map view.

The map label for this gene is 150399783

Identifier: 150399783

GI number: 150399783

Start: 1055442

End: 1056338

Strand: Reverse

Name: 150399783

Synonym: Mevan_1035

Alternate gene names: NA

Gene position: 1056338-1055442 (Counterclockwise)

Preceding gene: 150399784

Following gene: 150399777

Centisome position: 61.41

GC content: 31.88

Gene sequence:

>897_bases
ATGGATATGTCTGCATCAATATCCAGAATTTATAATTATTTAATTAAAAGAAACCTACGGATACTTAAAAAAACCGGTAA
AAATGTAGATGAAAGAATATTTATTGGATTAATTTTTGTAGTACTGGTTTTACCAATATTACTTAGGATAATAATTGGTT
TTACACTACAAACTACCATCATATTAACTCTTGTTTATTTAGGGAGTGTACTTGCAATTCCAAGTATAATGTATGAGTCA
AAAATGGAAAAGTTTGATAGCAACCTTCCAAAAGCACTTTATGTAATGGTTCTATCATTGGATTCAGGTAGGTCAATTGT
TGAAGCAATTAATGAAGTTATACGAAGTGGAATTCCTGAAGTAGATTCTGTATTTTCAAAAATAGTGCTGTTAATGACTG
AAAAAAAGCTTAGTTTTGAAGATTCGATGATGCTTGTATCAAATTCACTTGATTCAAAACTTTTTAGACAAATTAGCAGG
TTGATAATTGAAAATAGAAAATACGGCGGAGAACTTGCAAATACGTTAAAAAAGCTCGCTAAAACATTAGAGGATCTCCA
AAATTTAAAATCACAGCTTATCAGCGTTACTGGAAACGGACTTGCAGTCGGCCTTGTAATATTATGTGGCGTAATTCCTG
CAACTGCAGGATTAATTGGAGGATATTTAACAGTTATATCCCAATTAGCACCAACAATGCCATCAGTAGAACCGAACCAA
ATTTCAAAAGCCATTGAAACCGTTCAAATGGGTTCTGGACTTTTTGGACTGTTATTTTCTGTTCCATTATTTGGATTAAA
AATCAATAAAATGATTATAACTTGCGCTCTATGTATGTCTTTTGCAATTACTGCATTTTATGGAGTTTTAAGACTTACTG
GACTACTGTTCGCCTAA

Upstream 100 bases:

>100_bases
GATGGAATTATTAATGCTATTGACTTAGTAATGACTAAAATAGGGCTTTTATCTACCATAATTTTTACAATATTTATTAA
AATGAAAATAGAGTGAAAAA

Downstream 100 bases:

>100_bases
AATTACTTAAGTAAATTATCTACTTCATGATATAATAATAATACTTTATTTACTACATTAACATTAGTTCTTTTTCTAAA
TTTATCAATTACTAATTCAA

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTIILTLVYLGSVLAIPSIMYES
KMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPEVDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISR
LIIENRKYGGELANTLKKLAKTLEDLQNLKSQLISVTGNGLAVGLVILCGVIPATAGLIGGYLTVISQLAPTMPSVEPNQ
ISKAIETVQMGSGLFGLLFSVPLFGLKINKMIITCALCMSFAITAFYGVLRLTGLLFA

Sequences:

>Translated_298_residues
MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTIILTLVYLGSVLAIPSIMYES
KMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPEVDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISR
LIIENRKYGGELANTLKKLAKTLEDLQNLKSQLISVTGNGLAVGLVILCGVIPATAGLIGGYLTVISQLAPTMPSVEPNQ
ISKAIETVQMGSGLFGLLFSVPLFGLKINKMIITCALCMSFAITAFYGVLRLTGLLFA
>Mature_298_residues
MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTIILTLVYLGSVLAIPSIMYES
KMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPEVDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISR
LIIENRKYGGELANTLKKLAKTLEDLQNLKSQLISVTGNGLAVGLVILCGVIPATAGLIGGYLTVISQLAPTMPSVEPNQ
ISKAIETVQMGSGLFGLLFSVPLFGLKINKMIITCALCMSFAITAFYGVLRLTGLLFA

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018076 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 32693; Mature: 32693

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTLVYLGSVLAIPSIMYESKMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCH
VDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISRLIIENRKYGGELANTLKKLA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KTLEDLQNLKSQLISVTGNGLAVGLVILCGVIPATAGLIGGYLTVISQLAPTMPSVEPNQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ISKAIETVQMGSGLFGLLFSVPLFGLKINKMIITCALCMSFAITAFYGVLRLTGLLFA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDMSASISRIYNYLIKRNLRILKKTGKNVDERIFIGLIFVVLVLPILLRIIIGFTLQTTI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTLVYLGSVLAIPSIMYESKMEKFDSNLPKALYVMVLSLDSGRSIVEAINEVIRSGIPE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCH
VDSVFSKIVLLMTEKKLSFEDSMMLVSNSLDSKLFRQISRLIIENRKYGGELANTLKKLA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KTLEDLQNLKSQLISVTGNGLAVGLVILCGVIPATAGLIGGYLTVISQLAPTMPSVEPNQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ISKAIETVQMGSGLFGLLFSVPLFGLKINKMIITCALCMSFAITAFYGVLRLTGLLFA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]