| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399784
Identifier: 150399784
GI number: 150399784
Start: 1056343
End: 1057398
Strand: Reverse
Name: 150399784
Synonym: Mevan_1036
Alternate gene names: NA
Gene position: 1057398-1056343 (Counterclockwise)
Preceding gene: 150399785
Following gene: 150399783
Centisome position: 61.47
GC content: 28.41
Gene sequence:
>1056_bases ATGAATGTAAGACGTAAAAAAGAACCGAGTTTTTTAGATAAACTGTCGAATTTATTAAAAAGTACTAAAATTACGAAACG GAAAAATGTTTCAAGGGTTGGAAGGTCAGAATACTTAAAAAAAATATTTGATAGAAAAAAAGAAACATTTACGGAAGACG AAATTTTAGAATTTTATGAACCATACATTAATGAAACTCCAGAAGTAACTATTGATATAGACGATATTTTATTTGAAAAG CGTTTTGGCGCATTACAAGGTTATTCGGATTCTTTTTCGTATTGGGTTACAAATACATCATTTTTGCCATCAAAAAGAGA TTACCAGTATGCTGGAATTATTGATGAACGTGTTTATTTTTTAAAAATAATTGTTTTTTCAATATTTGCGGTTATTTTAC TTTTTTTATATGGAGTAATTACTTCTGATCCCATATCTGGAATTACTAATGGAATTATTTTTGCATTAATTATCCTATTT GGAGGAATATTTTATCCAAAATTAAAACTTACACTATTTAGGGGAGAAATAAAGATTCAAGTGTTAATGAGTATATTACA CCTTATATCAATGCTGAATTCCGGAGCGTCAGTCCAAGAAGCTATTAAAAATATTGCAAATAATCCAGAATACGGTTTAA CCTCTTACGAATTTAGGAGCATTATAAAAGATATTAATCAAGGAGGATATAACTTTGTAGAAGCACTAGAACGGGCAAAA GTAAGGTCAAAAATACCTCTTCTAAAAAAACTTTATGATCAATTAATTCTTGCTGCAAATAAAGGTGGAACCCAGTTATT ACTTGAAAACCTGTATAATGAAATAGTAAGGGAATCACTATCCAAAATTGATTCTTCAAAGTTTCAAATTTCAAATTTAG GTAATTTAATATTTGGTATAGGCCTTATTATACCATTTTCAGGTATGATACAGTCTGCATTAGGGGCTCAGCAGGGTTTT GATGGAATTATTAATGCTATTGACTTAGTAATGACTAAAATAGGGCTTTTATCTACCATAATTTTTACAATATTTATTAA AATGAAAATAGAGTGA
Upstream 100 bases:
>100_bases ACAATATTAACGGAATTAAAAAGGTAGGGGATGTAATTAAACAGTATCAAGAAAACCCAGAAAATGTTTTAAAGCATATA CTGGAGTAGTTGTGATTTTA
Downstream 100 bases:
>100_bases AAAAATGGATATGTCTGCATCAATATCCAGAATTTATAATTATTTAATTAAAAGAAACCTACGGATACTTAAAAAAACCG GTAAAAATGTAGATGAAAGA
Product: type II secretion system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MNVRRKKEPSFLDKLSNLLKSTKITKRKNVSRVGRSEYLKKIFDRKKETFTEDEILEFYEPYINETPEVTIDIDDILFEK RFGALQGYSDSFSYWVTNTSFLPSKRDYQYAGIIDERVYFLKIIVFSIFAVILLFLYGVITSDPISGITNGIIFALIILF GGIFYPKLKLTLFRGEIKIQVLMSILHLISMLNSGASVQEAIKNIANNPEYGLTSYEFRSIIKDINQGGYNFVEALERAK VRSKIPLLKKLYDQLILAANKGGTQLLLENLYNEIVRESLSKIDSSKFQISNLGNLIFGIGLIIPFSGMIQSALGAQQGF DGIINAIDLVMTKIGLLSTIIFTIFIKMKIE
Sequences:
>Translated_351_residues MNVRRKKEPSFLDKLSNLLKSTKITKRKNVSRVGRSEYLKKIFDRKKETFTEDEILEFYEPYINETPEVTIDIDDILFEK RFGALQGYSDSFSYWVTNTSFLPSKRDYQYAGIIDERVYFLKIIVFSIFAVILLFLYGVITSDPISGITNGIIFALIILF GGIFYPKLKLTLFRGEIKIQVLMSILHLISMLNSGASVQEAIKNIANNPEYGLTSYEFRSIIKDINQGGYNFVEALERAK VRSKIPLLKKLYDQLILAANKGGTQLLLENLYNEIVRESLSKIDSSKFQISNLGNLIFGIGLIIPFSGMIQSALGAQQGF DGIINAIDLVMTKIGLLSTIIFTIFIKMKIE >Mature_351_residues MNVRRKKEPSFLDKLSNLLKSTKITKRKNVSRVGRSEYLKKIFDRKKETFTEDEILEFYEPYINETPEVTIDIDDILFEK RFGALQGYSDSFSYWVTNTSFLPSKRDYQYAGIIDERVYFLKIIVFSIFAVILLFLYGVITSDPISGITNGIIFALIILF GGIFYPKLKLTLFRGEIKIQVLMSILHLISMLNSGASVQEAIKNIANNPEYGLTSYEFRSIIKDINQGGYNFVEALERAK VRSKIPLLKKLYDQLILAANKGGTQLLLENLYNEIVRESLSKIDSSKFQISNLGNLIFGIGLIIPFSGMIQSALGAQQGF DGIINAIDLVMTKIGLLSTIIFTIFIKMKIE
Specific function: Unknown
COG id: COG2064
COG function: function code NU; Flp pilus assembly protein TadC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018076 [H]
Pfam domain/function: PF00482 GSPII_F [H]
EC number: NA
Molecular weight: Translated: 39879; Mature: 39879
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVRRKKEPSFLDKLSNLLKSTKITKRKNVSRVGRSEYLKKIFDRKKETFTEDEILEFYE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH PYINETPEVTIDIDDILFEKRFGALQGYSDSFSYWVTNTSFLPSKRDYQYAGIIDERVYF HHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH LKIIVFSIFAVILLFLYGVITSDPISGITNGIIFALIILFGGIFYPKLKLTLFRGEIKIQ HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHH VLMSILHLISMLNSGASVQEAIKNIANNPEYGLTSYEFRSIIKDINQGGYNFVEALERAK HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH VRSKIPLLKKLYDQLILAANKGGTQLLLENLYNEIVRESLSKIDSSKFQISNLGNLIFGI HHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GLIIPFSGMIQSALGAQQGFDGIINAIDLVMTKIGLLSTIIFTIFIKMKIE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNVRRKKEPSFLDKLSNLLKSTKITKRKNVSRVGRSEYLKKIFDRKKETFTEDEILEFYE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH PYINETPEVTIDIDDILFEKRFGALQGYSDSFSYWVTNTSFLPSKRDYQYAGIIDERVYF HHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH LKIIVFSIFAVILLFLYGVITSDPISGITNGIIFALIILFGGIFYPKLKLTLFRGEIKIQ HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHH VLMSILHLISMLNSGASVQEAIKNIANNPEYGLTSYEFRSIIKDINQGGYNFVEALERAK HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH VRSKIPLLKKLYDQLILAANKGGTQLLLENLYNEIVRESLSKIDSSKFQISNLGNLIFGI HHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GLIIPFSGMIQSALGAQQGFDGIINAIDLVMTKIGLLSTIIFTIFIKMKIE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]