Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399764

Identifier: 150399764

GI number: 150399764

Start: 1028485

End: 1028829

Strand: Reverse

Name: 150399764

Synonym: Mevan_1016

Alternate gene names: NA

Gene position: 1028829-1028485 (Counterclockwise)

Preceding gene: 150399765

Following gene: 150399762

Centisome position: 59.81

GC content: 33.91

Gene sequence:

>345_bases
ATGATAGATAGAATTTTAGCAGATTTGAGTAAAACCGAGGGCATAAAAGGTTCGATGGTTGTTGGAAAAGACGGTTTAGT
TATTGCATCACAAATTCCATCAAACCTTGATAACGAACTTATTGGTGCAATGGCTTCAGCTGCATTTGGTTCTGCGGAAA
GAACTGCAAATGAAATTAATCAAGGAAACCTTGAACAAATGATGGTTGAAGGAGAATTTGGAAAAACTCTAATGACCGAT
GCAGGTGAAGGTATTTTAGTAGTTTTAGCCGATTCAAAAGTTAATCTAGGATTAATTAGAATTTCAATGAAAAAAGCTAC
TGAAAAAATAAAAGCTGCATTTTAA

Upstream 100 bases:

>100_bases
AGATGAAAATATTCAAAATATTATTCATGGGTCAATACGCCGAAAAGAGGGACTATCTGAAATATTCAATCAACTTAACA
TTATTTAGTGGGGTAATAGT

Downstream 100 bases:

>100_bases
AATTTAATTTTCTTTTTTTTTACAATATTTGCTATTTGGATAAAATAATAATACATATATACTTATGAGACAATACGTAA
GTATTGGGGATATGGATTTT

Product: roadblock/LC7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MIDRILADLSKTEGIKGSMVVGKDGLVIASQIPSNLDNELIGAMASAAFGSAERTANEINQGNLEQMMVEGEFGKTLMTD
AGEGILVVLADSKVNLGLIRISMKKATEKIKAAF

Sequences:

>Translated_114_residues
MIDRILADLSKTEGIKGSMVVGKDGLVIASQIPSNLDNELIGAMASAAFGSAERTANEINQGNLEQMMVEGEFGKTLMTD
AGEGILVVLADSKVNLGLIRISMKKATEKIKAAF
>Mature_114_residues
MIDRILADLSKTEGIKGSMVVGKDGLVIASQIPSNLDNELIGAMASAAFGSAERTANEINQGNLEQMMVEGEFGKTLMTD
AGEGILVVLADSKVNLGLIRISMKKATEKIKAAF

Specific function: Unknown

COG id: COG2018

COG function: function code R; Uncharacterized distant relative of homeotic protein bithoraxoid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0310 and MJ1340 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004942 [H]

Pfam domain/function: PF03259 Robl_LC7 [H]

EC number: NA

Molecular weight: Translated: 12013; Mature: 12013

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRILADLSKTEGIKGSMVVGKDGLVIASQIPSNLDNELIGAMASAAFGSAERTANEIN
CHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHCC
QGNLEQMMVEGEFGKTLMTDAGEGILVVLADSKVNLGLIRISMKKATEKIKAAF
CCCHHHEEECCCCCCEEECCCCCCEEEEEECCCCCEEEEEEEHHHHHHHHHCCC
>Mature Secondary Structure
MIDRILADLSKTEGIKGSMVVGKDGLVIASQIPSNLDNELIGAMASAAFGSAERTANEIN
CHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHCC
QGNLEQMMVEGEFGKTLMTDAGEGILVVLADSKVNLGLIRISMKKATEKIKAAF
CCCHHHEEECCCCCCEEECCCCCCEEEEEECCCCCEEEEEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]