Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

Click here to switch to the map view.

The map label for this gene is 150399740

Identifier: 150399740

GI number: 150399740

Start: 1007525

End: 1008193

Strand: Reverse

Name: 150399740

Synonym: Mevan_0992

Alternate gene names: NA

Gene position: 1008193-1007525 (Counterclockwise)

Preceding gene: 150399741

Following gene: 150399739

Centisome position: 58.61

GC content: 24.81

Gene sequence:

>669_bases
ATGGAAATTATTCCGGTTATTGATTTAAAAAATGGTTTAGCGGTTTCTGGAAAGAGCGGAGATAGAAATAATTATTTTCC
AATAAATTCAATTATATTAGGTTCTTCAATTCCAAAAGATGTAGTTTCAATTTACAAAGAAAACGGGGCAAAAAAAGTTT
ATATTGCGGATTTAGATTCAATAATGAACTTTGGAAATAATTTTGAAACTATTAATGAGTTAAATATCTTTAAAATTGTA
GATGTTGGAATTAAAGATTATAATGATTTTAAAAATGTTAAGGGAAATTTTGAAAAAATAATTTTGGGTACAGAAACGCT
AAAAGATTATGAATTATTAAATGAAAAAGATATAATTTTAAGCCTTGATTTTAAAGATGGCATACTTTTAAATCACGATT
TAGATGAACTATTAAGTAGGATAAATATTGAAACACCACTTATTATTTTAGATATTTCAGCAGTTGGAACTCAAAATGGG
GTAAATATTGAACTAATTAAAAATATAGTTAAAAAAACTAAAAATCCAATTTATGTTGGCGGAGGAATAAAATCTGAACA
CGATTTAAAAATATTAAATGATATTGGAGTTTTTGGAGTTTTAATTGGAACCACAATTCACAATGGAACGCTTGATTTAA
AAAAAATCATTCAAAAATATGGGGAATAG

Upstream 100 bases:

>100_bases
TTAAAAAATACAAAAGTTTTTAAACATTTTTTATATAATTTTTTTTAAATTATTACTTCTTACATGATTTTACATTAAAC
AGCTATTTCGAGTGATTAAA

Downstream 100 bases:

>100_bases
TATGGAATTTGAACTTACAAGATATGACGCAATTAAAATTTTAATGGAATATGTAACCGATGAAATAGTCGTTTGTAACA
TCGGAATTCCAAGTAAAGAA

Product: hisA/hisF family protein

Products: 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-; $phosphoribosyl)imidazole-4-carboxamide

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MEIIPVIDLKNGLAVSGKSGDRNNYFPINSIILGSSIPKDVVSIYKENGAKKVYIADLDSIMNFGNNFETINELNIFKIV
DVGIKDYNDFKNVKGNFEKIILGTETLKDYELLNEKDIILSLDFKDGILLNHDLDELLSRINIETPLIILDISAVGTQNG
VNIELIKNIVKKTKNPIYVGGGIKSEHDLKILNDIGVFGVLIGTTIHNGTLDLKKIIQKYGE

Sequences:

>Translated_222_residues
MEIIPVIDLKNGLAVSGKSGDRNNYFPINSIILGSSIPKDVVSIYKENGAKKVYIADLDSIMNFGNNFETINELNIFKIV
DVGIKDYNDFKNVKGNFEKIILGTETLKDYELLNEKDIILSLDFKDGILLNHDLDELLSRINIETPLIILDISAVGTQNG
VNIELIKNIVKKTKNPIYVGGGIKSEHDLKILNDIGVFGVLIGTTIHNGTLDLKKIIQKYGE
>Mature_222_residues
MEIIPVIDLKNGLAVSGKSGDRNNYFPINSIILGSSIPKDVVSIYKENGAKKVYIADLDSIMNFGNNFETINELNIFKIV
DVGIKDYNDFKNVKGNFEKIILGTETLKDYELLNEKDIILSLDFKDGILLNHDLDELLSRINIETPLIILDISAVGTQNG
VNIELIKNIVKKTKNPIYVGGGIKSEHDLKILNDIGVFGVLIGTTIHNGTLDLKKIIQKYGE

Specific function: Unknown

COG id: COG1411

COG function: function code R; Uncharacterized protein related to proFAR isomerase (HisA)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hisA/hisF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006062
- InterPro:   IPR004650
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00977 His_biosynth [H]

EC number: 5.3.1.16

Molecular weight: Translated: 24632; Mature: 24632

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIPVIDLKNGLAVSGKSGDRNNYFPINSIILGSSIPKDVVSIYKENGAKKVYIADLDS
CCEEEEEECCCCEEEECCCCCCCCCCCHHHEEECCCCCHHHHHHHHCCCCCEEEEEEHHH
IMNFGNNFETINELNIFKIVDVGIKDYNDFKNVKGNFEKIILGTETLKDYELLNEKDIIL
HHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCEEEEEEECCCHHHHHHCCCCCEEE
SLDFKDGILLNHDLDELLSRINIETPLIILDISAVGTQNGVNIELIKNIVKKTKNPIYVG
EEECCCCEEEECCHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEE
GGIKSEHDLKILNDIGVFGVLIGTTIHNGTLDLKKIIQKYGE
CCCCCCCCEEHHHHHHHHHHHHHCEECCCCCHHHHHHHHHCC
>Mature Secondary Structure
MEIIPVIDLKNGLAVSGKSGDRNNYFPINSIILGSSIPKDVVSIYKENGAKKVYIADLDS
CCEEEEEECCCCEEEECCCCCCCCCCCHHHEEECCCCCHHHHHHHHCCCCCEEEEEEHHH
IMNFGNNFETINELNIFKIVDVGIKDYNDFKNVKGNFEKIILGTETLKDYELLNEKDIIL
HHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCEEEEEEECCCHHHHHHCCCCCEEE
SLDFKDGILLNHDLDELLSRINIETPLIILDISAVGTQNGVNIELIKNIVKKTKNPIYVG
EEECCCCEEEECCHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEE
GGIKSEHDLKILNDIGVFGVLIGTTIHNGTLDLKKIIQKYGE
CCCCCCCCEEHHHHHHHHHHHHHCEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 1-(5-phosphoribosyl)-5-[(5-; $phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

Specific reaction: 1-(5-phosphoribosyl)-5-[(5- $phosphoribosylamino)methylideneamino]imidazole-4-carboxamide = 5- $[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5- $phosphoribosyl)imidazole-4-carboxamide

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]