| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399649
Identifier: 150399649
GI number: 150399649
Start: 919094
End: 919471
Strand: Reverse
Name: 150399649
Synonym: Mevan_0899
Alternate gene names: NA
Gene position: 919471-919094 (Counterclockwise)
Preceding gene: 150399650
Following gene: 150399642
Centisome position: 53.46
GC content: 31.75
Gene sequence:
>378_bases TTGTATGGCGTTGGAACTTTTTTTGCAAAAATAGTATCAAATGAGGATCCTTACTTACAGTGGATACTTGTAAATATTGT TGGAATTATACTCTGTTTTTTAATATTTGGGGGAAAATTTAACACTTTAATCGAGTATCCTACTAAAGTTTTAGTTTACG GAATACTTGCAGCGATTTTAGTTATTTTAGGCACTTTTGTACTATATTATGGGTTAAATCGGGGAAAAGCAAGTGTTGTA GTACCAATATCGTCAATTGGGCCTGCAATAACAACAATTCTGGCAGTAATTTTTTTAAAAGAGCATCTTTCATCACAGCA GATTTTTGGAATAGCAATGATATTAGGTGGAATTATACTACTTTCAATAAGCAGCTAA
Upstream 100 bases:
>100_bases AAGGGCAATAAACATTTAATTTTACTTTATTTTACTTAATTTTTTAATATTTTAGGGTGATTTTATCGAAAGCATTCTAA TAGGGTTACTTGCTGCACTT
Downstream 100 bases:
>100_bases TATATAAAAAATAGAATTAAGTAAAAAAAGTTAAATAAATTAAATTCCGAGGTATTTTTTAGCCCCTTGGGATCCGATTT GTAACTTTATTGCACTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MYGVGTFFAKIVSNEDPYLQWILVNIVGIILCFLIFGGKFNTLIEYPTKVLVYGILAAILVILGTFVLYYGLNRGKASVV VPISSIGPAITTILAVIFLKEHLSSQQIFGIAMILGGIILLSISS
Sequences:
>Translated_125_residues MYGVGTFFAKIVSNEDPYLQWILVNIVGIILCFLIFGGKFNTLIEYPTKVLVYGILAAILVILGTFVLYYGLNRGKASVV VPISSIGPAITTILAVIFLKEHLSSQQIFGIAMILGGIILLSISS >Mature_125_residues MYGVGTFFAKIVSNEDPYLQWILVNIVGIILCFLIFGGKFNTLIEYPTKVLVYGILAAILVILGTFVLYYGLNRGKASVV VPISSIGPAITTILAVIFLKEHLSSQQIFGIAMILGGIILLSISS
Specific function: Unknown
COG id: COG2510
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 13512; Mature: 13512
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS00878 ODR_DC_2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGVGTFFAKIVSNEDPYLQWILVNIVGIILCFLIFGGKFNTLIEYPTKVLVYGILAAIL CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VILGTFVLYYGLNRGKASVVVPISSIGPAITTILAVIFLKEHLSSQQIFGIAMILGGIIL HHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH LSISS HEECC >Mature Secondary Structure MYGVGTFFAKIVSNEDPYLQWILVNIVGIILCFLIFGGKFNTLIEYPTKVLVYGILAAIL CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VILGTFVLYYGLNRGKASVVVPISSIGPAITTILAVIFLKEHLSSQQIFGIAMILGGIIL HHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH LSISS HEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]