| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is pgk [H]
Identifier: 150399596
GI number: 150399596
Start: 873991
End: 875235
Strand: Reverse
Name: pgk [H]
Synonym: Mevan_0845
Alternate gene names: 150399596
Gene position: 875235-873991 (Counterclockwise)
Preceding gene: 150399599
Following gene: 150399595
Centisome position: 50.88
GC content: 35.98
Gene sequence:
>1245_bases ATGTTTTTGACCCTTGATGACTTTAATTTGGAAGGAAAAACGGTTGCATTACGTGTAGATATTAATAGTCCGATTGATGT GAATAATGGGGCTATTTTGGATGACACGAGAATTAAAGCATGTTACAATACGATAAAAGACCTTTCTAACAAAGGTGCAA AAGTAGTAATTTTGGCCCACCAGAGTAGGCCTGGAAAAAAGGATTTTACAACCCTCGAATCTCACGCAAAAAAATTATCC GAGGTCTTAGGTATCGAAGTAGGATATGTTGATGGGTTATTGGGGTCTACTGTACGAGAATCTATTTTAGGGATGGACAA CGGCGAAGTAATACTTCTTGAAAATGTAAGGCTTTTATCTGAAGAAGTCCTTTCAGAATGGAAATCTTGGGATAAAATTA CCCCTGAAAAACAGGCAAAAACAATAATGGTAAAAAAATTACATCCTTTTTTTGATTATTTCGTAAATGATGCGTTTGCA GCAGCCCACAGGGCCCAACCTTCACTTGTAGGCTTTTCATATTATATGCCAATGCTTTGTGGACGGGTCATGGAAAAAGA ACTTTTTACGCTTACAAAAGTTATTAAAAATCCAGATAGGCCATGTGTATTTGCACTAGGGGGTGCAAAAGCGGATGACA GTATCGAAGTAATTAAAAACGTGCTTGAAAAACAGACTGCTGATCAAGTAATTACAAGTGGGATTGTTGCAAATATATTT TTAATTGCAAAAGGATTTAAATTGGGCCCTAACGAAAAATTAATTGACGATATGGGTTACACTGGGCAAGTAACTATTGC AAAAGAGTTAATTGAAAAATACGGTGAGAAAATCGTAATACCTATTGATGCAGCTTTAAATATTGAAGGGGAAAGAAAAG AAACTGAATTAAATTTAAATAATGAAGTAAGTCATCCAATCCATGATCTGGGTCAAAAAACAATTGAAAGTTATTGGGAA ATTTTAAAGAATGCCAAGACAATAGTTGCAAACGGCCCTGCAGGAGTATTTGAAAACAAAAATTTCTTAAAAGGAACAGA AGAAATTTTAAAAGCAACTGCAAGTTCAAAAGGATTTTCAGTAATTGGAGGCGGACATCTGTCTGCTGCTGCTGAAGTAG TCGGAATTTCTGGAAATGTGGGCCACATAAGCACTGGAGGGGGTGCGTGTATTGAATTTTTGGCAGGAAAAAGACTTCCC GTAATTGAAATGCTTTTAGAGTCTTATGAAAAACATAAAGCCTAA
Upstream 100 bases:
>100_bases AGGATTGGAAAGATATATATAACTAAGTTATCTAGCTTTTAACGATTTAATGTCATAATAGTGCGAAAATAAAAGTAAAA TATCAACTGGAGGATGCGTT
Downstream 100 bases:
>100_bases TTCCATCAAAATATTTCATTTAGACTTATTTTTTACTCTTATTTTAAAAAAGTACTGAAAATATATTTTAAATGGAAAAT TATATATAAGAATCAACTTA
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MFLTLDDFNLEGKTVALRVDINSPIDVNNGAILDDTRIKACYNTIKDLSNKGAKVVILAHQSRPGKKDFTTLESHAKKLS EVLGIEVGYVDGLLGSTVRESILGMDNGEVILLENVRLLSEEVLSEWKSWDKITPEKQAKTIMVKKLHPFFDYFVNDAFA AAHRAQPSLVGFSYYMPMLCGRVMEKELFTLTKVIKNPDRPCVFALGGAKADDSIEVIKNVLEKQTADQVITSGIVANIF LIAKGFKLGPNEKLIDDMGYTGQVTIAKELIEKYGEKIVIPIDAALNIEGERKETELNLNNEVSHPIHDLGQKTIESYWE ILKNAKTIVANGPAGVFENKNFLKGTEEILKATASSKGFSVIGGGHLSAAAEVVGISGNVGHISTGGGACIEFLAGKRLP VIEMLLESYEKHKA
Sequences:
>Translated_414_residues MFLTLDDFNLEGKTVALRVDINSPIDVNNGAILDDTRIKACYNTIKDLSNKGAKVVILAHQSRPGKKDFTTLESHAKKLS EVLGIEVGYVDGLLGSTVRESILGMDNGEVILLENVRLLSEEVLSEWKSWDKITPEKQAKTIMVKKLHPFFDYFVNDAFA AAHRAQPSLVGFSYYMPMLCGRVMEKELFTLTKVIKNPDRPCVFALGGAKADDSIEVIKNVLEKQTADQVITSGIVANIF LIAKGFKLGPNEKLIDDMGYTGQVTIAKELIEKYGEKIVIPIDAALNIEGERKETELNLNNEVSHPIHDLGQKTIESYWE ILKNAKTIVANGPAGVFENKNFLKGTEEILKATASSKGFSVIGGGHLSAAAEVVGISGNVGHISTGGGACIEFLAGKRLP VIEMLLESYEKHKA >Mature_414_residues MFLTLDDFNLEGKTVALRVDINSPIDVNNGAILDDTRIKACYNTIKDLSNKGAKVVILAHQSRPGKKDFTTLESHAKKLS EVLGIEVGYVDGLLGSTVRESILGMDNGEVILLENVRLLSEEVLSEWKSWDKITPEKQAKTIMVKKLHPFFDYFVNDAFA AAHRAQPSLVGFSYYMPMLCGRVMEKELFTLTKVIKNPDRPCVFALGGAKADDSIEVIKNVLEKQTADQVITSGIVANIF LIAKGFKLGPNEKLIDDMGYTGQVTIAKELIEKYGEKIVIPIDAALNIEGERKETELNLNNEVSHPIHDLGQKTIESYWE ILKNAKTIVANGPAGVFENKNFLKGTEEILKATASSKGFSVIGGGHLSAAAEVVGISGNVGHISTGGGACIEFLAGKRLP VIEMLLESYEKHKA
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=421, Percent_Identity=35.3919239904988, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI31543397, Length=425, Percent_Identity=35.7647058823529, Blast_Score=186, Evalue=4e-47, Organism=Escherichia coli, GI1789294, Length=425, Percent_Identity=34.8235294117647, Blast_Score=204, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17508823, Length=422, Percent_Identity=36.9668246445498, Blast_Score=207, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6319857, Length=420, Percent_Identity=33.0952380952381, Blast_Score=182, Evalue=9e-47, Organism=Drosophila melanogaster, GI24581203, Length=421, Percent_Identity=33.9667458432304, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI17136394, Length=423, Percent_Identity=34.9881796690307, Blast_Score=176, Evalue=2e-44,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 45233; Mature: 45233
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLTLDDFNLEGKTVALRVDINSPIDVNNGAILDDTRIKACYNTIKDLSNKGAKVVILAH CEEEEECCCCCCCEEEEEEECCCCEECCCCEEECCHHHHHHHHHHHHHHCCCCEEEEEEE QSRPGKKDFTTLESHAKKLSEVLGIEVGYVDGLLGSTVRESILGMDNGEVILLENVRLLS CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHH EEVLSEWKSWDKITPEKQAKTIMVKKLHPFFDYFVNDAFAAAHRAQPSLVGFSYYMPMLC HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GRVMEKELFTLTKVIKNPDRPCVFALGGAKADDSIEVIKNVLEKQTADQVITSGIVANIF HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAKGFKLGPNEKLIDDMGYTGQVTIAKELIEKYGEKIVIPIDAALNIEGERKETELNLN HHHCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCCCCC NEVSHPIHDLGQKTIESYWEILKNAKTIVANGPAGVFENKNFLKGTEEILKATASSKGFS CCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCE VIGGGHLSAAAEVVGISGNVGHISTGGGACIEFLAGKRLPVIEMLLESYEKHKA EEECCCHHHHHHEEEECCCCCEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MFLTLDDFNLEGKTVALRVDINSPIDVNNGAILDDTRIKACYNTIKDLSNKGAKVVILAH CEEEEECCCCCCCEEEEEEECCCCEECCCCEEECCHHHHHHHHHHHHHHCCCCEEEEEEE QSRPGKKDFTTLESHAKKLSEVLGIEVGYVDGLLGSTVRESILGMDNGEVILLENVRLLS CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHH EEVLSEWKSWDKITPEKQAKTIMVKKLHPFFDYFVNDAFAAAHRAQPSLVGFSYYMPMLC HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GRVMEKELFTLTKVIKNPDRPCVFALGGAKADDSIEVIKNVLEKQTADQVITSGIVANIF HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAKGFKLGPNEKLIDDMGYTGQVTIAKELIEKYGEKIVIPIDAALNIEGERKETELNLN HHHCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCCCCC NEVSHPIHDLGQKTIESYWEILKNAKTIVANGPAGVFENKNFLKGTEEILKATASSKGFS CCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCE VIGGGHLSAAAEVVGISGNVGHISTGGGACIEFLAGKRLPVIEMLLESYEKHKA EEECCCHHHHHHEEEECCCCCEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA