| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399599
Identifier: 150399599
GI number: 150399599
Start: 876649
End: 877845
Strand: Reverse
Name: 150399599
Synonym: Mevan_0848
Alternate gene names: NA
Gene position: 877845-876649 (Counterclockwise)
Preceding gene: 150399600
Following gene: 150399596
Centisome position: 51.04
GC content: 26.82
Gene sequence:
>1197_bases ATGGTAAATTTGTTTTTTGTAGCTTTTGGTGCGATTACTGGCTCATTTACTGGATTAATTCCTGGAATTCATCCAAATTT ATTAATTCCCTTTTCAACGATTTTACTACCTTATTTCGGACAAACAAACTATTTTGGATTTTTAATGGGGCTTGTTATAT CTCATTACTTTTTGAACTATATTCCTTCTGCATTTATCGGAGTTCCCGACTCAGAATCGGCAGTTTCATCAATTCCAATG CATAAATTAACAAAAGATGGAAAAGGTTATGAAGCCGTAATTTTAGCAGGAATGGGGGGATTTTTAGGAATTATTTTTTC ATCAATTTTATTTTTAATAATTTTTACGTTAAATTTGGATTTAAATTCAATATATGGTATTTTAAAGCCATTTTTACCAT ATATCCTTATAATTTTAATTTTTACATCAATAATCTTCTCAAAAAATAAATTCTGGACATTTTTAGTAATTTTATTTTCA GGAACCCTTGGAATATCCGTATTTTATATAAATCCTTCTTATAATAACACAATGGCAGTACTATTTACAGGAATGTTTGG AATTCCATTTTTAATTACAAATCTTGGAAGAAAAAAATTAGGATATCAGTACATGAGTTTTCCAAAGTTAAATGGTTCTT ATTTAAAATCAGTAGTTTTTGGAACAATTGGCGGATTTTTAAGAATATTTATACCTGCAACTGGCGGAGCCCAAATAAAC TACTTTTTAAGCAAGCTAATAAAAGAAGAAAACATTGAAAATTTCATTGTTTCACAAGGTGCAATAACACTTTCAAATGA ATTATTTTCGATACTTGCACTTGTTTTAATCGGAACTGGAAGAAGTGGAATTGCAGAAACAATAAAAAATTTAAATCTTG AGTATACTGCTTTTGATATATTTGGGAGTATTTTTCTTGCATCTGGCTTATCGCTACTTTTTTTATCAACTGCTTCAAAA TATGTACTGAAAAATATAAATCGATATAACTATGGTGATATCTCAAAATATTTGATTATATTCTGCACTTTTTTGATATT TTTATTGACATTTAACAATTATTTTACATATCATGCTGTAATCTATATAGTATCAATATCCATTGGAATTATATGTATTA AAAAACAAGTAAATATGTCAAATATGATGTCAGTTTTAATTTTTCCGACAATTTTTTATTTTTTAGGAATATACTAA
Upstream 100 bases:
>100_bases TTATGGCTTAAAAATAAATGAAAAAGTGTATTTTATTAATGAAGAAGATGCTTTAAATTTAGGGTACAAAAAATGCAGCT ACTGTGAAAAAAGGGATTAA
Downstream 100 bases:
>100_bases GAATATAAAAAAAGTTATTCTAACATGTAAAAATAATCTTCAAGCCAACTTACATTGCCATATTTTGGCGTATTGTGTTC TAAAAATGATATTATAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MVNLFFVAFGAITGSFTGLIPGIHPNLLIPFSTILLPYFGQTNYFGFLMGLVISHYFLNYIPSAFIGVPDSESAVSSIPM HKLTKDGKGYEAVILAGMGGFLGIIFSSILFLIIFTLNLDLNSIYGILKPFLPYILIILIFTSIIFSKNKFWTFLVILFS GTLGISVFYINPSYNNTMAVLFTGMFGIPFLITNLGRKKLGYQYMSFPKLNGSYLKSVVFGTIGGFLRIFIPATGGAQIN YFLSKLIKEENIENFIVSQGAITLSNELFSILALVLIGTGRSGIAETIKNLNLEYTAFDIFGSIFLASGLSLLFLSTASK YVLKNINRYNYGDISKYLIIFCTFLIFLLTFNNYFTYHAVIYIVSISIGIICIKKQVNMSNMMSVLIFPTIFYFLGIY
Sequences:
>Translated_398_residues MVNLFFVAFGAITGSFTGLIPGIHPNLLIPFSTILLPYFGQTNYFGFLMGLVISHYFLNYIPSAFIGVPDSESAVSSIPM HKLTKDGKGYEAVILAGMGGFLGIIFSSILFLIIFTLNLDLNSIYGILKPFLPYILIILIFTSIIFSKNKFWTFLVILFS GTLGISVFYINPSYNNTMAVLFTGMFGIPFLITNLGRKKLGYQYMSFPKLNGSYLKSVVFGTIGGFLRIFIPATGGAQIN YFLSKLIKEENIENFIVSQGAITLSNELFSILALVLIGTGRSGIAETIKNLNLEYTAFDIFGSIFLASGLSLLFLSTASK YVLKNINRYNYGDISKYLIIFCTFLIFLLTFNNYFTYHAVIYIVSISIGIICIKKQVNMSNMMSVLIFPTIFYFLGIY >Mature_398_residues MVNLFFVAFGAITGSFTGLIPGIHPNLLIPFSTILLPYFGQTNYFGFLMGLVISHYFLNYIPSAFIGVPDSESAVSSIPM HKLTKDGKGYEAVILAGMGGFLGIIFSSILFLIIFTLNLDLNSIYGILKPFLPYILIILIFTSIIFSKNKFWTFLVILFS GTLGISVFYINPSYNNTMAVLFTGMFGIPFLITNLGRKKLGYQYMSFPKLNGSYLKSVVFGTIGGFLRIFIPATGGAQIN YFLSKLIKEENIENFIVSQGAITLSNELFSILALVLIGTGRSGIAETIKNLNLEYTAFDIFGSIFLASGLSLLFLSTASK YVLKNINRYNYGDISKYLIIFCTFLIFLLTFNNYFTYHAVIYIVSISIGIICIKKQVNMSNMMSVLIFPTIFYFLGIY
Specific function: Unknown
COG id: COG1784
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 44342; Mature: 44342
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNLFFVAFGAITGSFTGLIPGIHPNLLIPFSTILLPYFGQTNYFGFLMGLVISHYFLNY CEEEEEEHHHHHHHCHHHCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IPSAFIGVPDSESAVSSIPMHKLTKDGKGYEAVILAGMGGFLGIIFSSILFLIIFTLNLD CCHHHCCCCCCHHHHHHCCHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC LNSIYGILKPFLPYILIILIFTSIIFSKNKFWTFLVILFSGTLGISVFYINPSYNNTMAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHH LFTGMFGIPFLITNLGRKKLGYQYMSFPKLNGSYLKSVVFGTIGGFLRIFIPATGGAQIN HHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHH YFLSKLIKEENIENFIVSQGAITLSNELFSILALVLIGTGRSGIAETIKNLNLEYTAFDI HHHHHHHHHCCHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEHHHH FGSIFLASGLSLLFLSTASKYVLKNINRYNYGDISKYLIIFCTFLIFLLTFNNYFTYHAV HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH IYIVSISIGIICIKKQVNMSNMMSVLIFPTIFYFLGIY HHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVNLFFVAFGAITGSFTGLIPGIHPNLLIPFSTILLPYFGQTNYFGFLMGLVISHYFLNY CEEEEEEHHHHHHHCHHHCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IPSAFIGVPDSESAVSSIPMHKLTKDGKGYEAVILAGMGGFLGIIFSSILFLIIFTLNLD CCHHHCCCCCCHHHHHHCCHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC LNSIYGILKPFLPYILIILIFTSIIFSKNKFWTFLVILFSGTLGISVFYINPSYNNTMAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHH LFTGMFGIPFLITNLGRKKLGYQYMSFPKLNGSYLKSVVFGTIGGFLRIFIPATGGAQIN HHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHH YFLSKLIKEENIENFIVSQGAITLSNELFSILALVLIGTGRSGIAETIKNLNLEYTAFDI HHHHHHHHHCCHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEHHHH FGSIFLASGLSLLFLSTASKYVLKNINRYNYGDISKYLIIFCTFLIFLLTFNNYFTYHAV HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH IYIVSISIGIICIKKQVNMSNMMSVLIFPTIFYFLGIY HHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]