Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399580

Identifier: 150399580

GI number: 150399580

Start: 859861

End: 860529

Strand: Reverse

Name: 150399580

Synonym: Mevan_0829

Alternate gene names: NA

Gene position: 860529-859861 (Counterclockwise)

Preceding gene: 150399581

Following gene: 150399579

Centisome position: 50.03

GC content: 30.34

Gene sequence:

>669_bases
ATGGAATTTGACCTATGGGTTAGAATTATTAAAGAAAGTATCGAACAAAAGAATGTTGACCCTTGGAACGTCAACATCTC
TGAGATAACGGATCAATACCTTGGAACCATAAGAGAACTTAGAAAATTTGATATACGGCTTTCTGCAGATGTCGTACTGG
TTGCAGGGATTTTACTTCGTTTAAAATCGCAAGTACTTTATGGGGAGTGTGAAAATGCGTTTAAAGAGGAAGTTGAAGAT
AATTATGACGATGAAGAATATTTAGATGAAGAATATTTAGATGACCAAATAGTTGAACCTATTGAAAAAAAACAAAAAGA
GCCAAAACTGGAAAATATGACCTTAGATGGCCTTATCAGTACCCTTAAAACTGAACTTAAAAAAATTAAGGAAATAAAAC
CCCGCAAAAAAAGAGAAATTGTACGGCCAACCGAATTATATAGGTTAGTTGAAGAAATGATTGAAGAAGACGATATTTCC
GATCTAATGGAATTTATGATTTTGGAATTAAAAAAATCAGGCGGAAAATTTATATTTCAAAATAAATTTAAAACAAGGGA
TGAATTAATAAAAAATTTTCTACCTGTATTATATCTTGCAAATGATGGAAAAATTGATTTAGAGCAGGAAACTTTATTTG
AAGAATTAAGCATCGAATTAAAAAAATAA

Upstream 100 bases:

>100_bases
TGACGGTTCAAAAGTAATCTCTTGGAATTTTTTAGTATGGCTTTTAATATTTATTCCCCTATTTGTACTGACGTTCTTCT
AAAAAACATGGAATGATAAA

Downstream 100 bases:

>100_bases
TATTTTTATTATACTTTTTTAAACTTATTAAGATTATTGCAAACCATATCAAAAAAATCAAATCGAAATAGTTATATATA
CCTTCATAGTCATATACATA

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MEFDLWVRIIKESIEQKNVDPWNVNISEITDQYLGTIRELRKFDIRLSADVVLVAGILLRLKSQVLYGECENAFKEEVED
NYDDEEYLDEEYLDDQIVEPIEKKQKEPKLENMTLDGLISTLKTELKKIKEIKPRKKREIVRPTELYRLVEEMIEEDDIS
DLMEFMILELKKSGGKFIFQNKFKTRDELIKNFLPVLYLANDGKIDLEQETLFEELSIELKK

Sequences:

>Translated_222_residues
MEFDLWVRIIKESIEQKNVDPWNVNISEITDQYLGTIRELRKFDIRLSADVVLVAGILLRLKSQVLYGECENAFKEEVED
NYDDEEYLDEEYLDDQIVEPIEKKQKEPKLENMTLDGLISTLKTELKKIKEIKPRKKREIVRPTELYRLVEEMIEEDDIS
DLMEFMILELKKSGGKFIFQNKFKTRDELIKNFLPVLYLANDGKIDLEQETLFEELSIELKK
>Mature_222_residues
MEFDLWVRIIKESIEQKNVDPWNVNISEITDQYLGTIRELRKFDIRLSADVVLVAGILLRLKSQVLYGECENAFKEEVED
NYDDEEYLDEEYLDDQIVEPIEKKQKEPKLENMTLDGLISTLKTELKKIKEIKPRKKREIVRPTELYRLVEEMIEEDDIS
DLMEFMILELKKSGGKFIFQNKFKTRDELIKNFLPVLYLANDGKIDLEQETLFEELSIELKK

Specific function: Unknown

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 26388; Mature: 26388

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFDLWVRIIKESIEQKNVDPWNVNISEITDQYLGTIRELRKFDIRLSADVVLVAGILLR
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LKSQVLYGECENAFKEEVEDNYDDEEYLDEEYLDDQIVEPIEKKQKEPKLENMTLDGLIS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHH
TLKTELKKIKEIKPRKKREIVRPTELYRLVEEMIEEDDISDLMEFMILELKKSGGKFIFQ
HHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEC
NKFKTRDELIKNFLPVLYLANDGKIDLEQETLFEELSIELKK
CCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEFDLWVRIIKESIEQKNVDPWNVNISEITDQYLGTIRELRKFDIRLSADVVLVAGILLR
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LKSQVLYGECENAFKEEVEDNYDDEEYLDEEYLDDQIVEPIEKKQKEPKLENMTLDGLIS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHH
TLKTELKKIKEIKPRKKREIVRPTELYRLVEEMIEEDDISDLMEFMILELKKSGGKFIFQ
HHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEC
NKFKTRDELIKNFLPVLYLANDGKIDLEQETLFEELSIELKK
CCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]