| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399581
Identifier: 150399581
GI number: 150399581
Start: 860548
End: 861147
Strand: Reverse
Name: 150399581
Synonym: Mevan_0830
Alternate gene names: NA
Gene position: 861147-860548 (Counterclockwise)
Preceding gene: 150399582
Following gene: 150399580
Centisome position: 50.07
GC content: 31.83
Gene sequence:
>600_bases ATGGGATACCGTGAAAACATATTTAGTTTTAACCACATTGAAATAAAAGACTTGATTATTTCTTCATTTTTAATCGCACT TGTATTTATCTGGCCAAGGGGATTTCCAACGTTAAATACTGGCTTTTTAGCTCAGTTCATAGCTACATTTTTTACAGTTG GACTTGCATTTATATTACACGAACTCGCCCATAGAACAGTTGCAAGAAAATTTGGAGCTTGGAGTGAATTTAGGGCATGG TATGAAGGACTTGCAATTGCAATAGTTTTAAAAATAATTTTGGGATTTACATTTATTGCACCTGGGGCAGTATATATTCA TAAAGATTATTTAACAACAAAAGAAAACGCCCTTATTTCCTTAGCTGGACCTTTAACAAATGTAACACTTGCAATTTTAT TTTTGATACTACCAATACCTCCAATAATTTTTTCAGGACATTATATCGATATTTCAGGATATGGGTACTATGTAAACATG TTTTTGGCATTTTTCAATATGCTTCCAATATATCCGTTTGACGGTTCAAAAGTAATCTCTTGGAATTTTTTAGTATGGCT TTTAATATTTATTCCCCTATTTGTACTGACGTTCTTCTAA
Upstream 100 bases:
>100_bases TTAAATTTACATCTTTAAATATTATTTAATACTTACTCAATATAATTTCAAAGCAAAAAATGTATAATACATGTTATTAA AGTATAATTGGTGAATAATT
Downstream 100 bases:
>100_bases AAAACATGGAATGATAAAATGGAATTTGACCTATGGGTTAGAATTATTAAAGAAAGTATCGAACAAAAGAATGTTGACCC TTGGAACGTCAACATCTCTG
Product: peptidase M50
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MGYRENIFSFNHIEIKDLIISSFLIALVFIWPRGFPTLNTGFLAQFIATFFTVGLAFILHELAHRTVARKFGAWSEFRAW YEGLAIAIVLKIILGFTFIAPGAVYIHKDYLTTKENALISLAGPLTNVTLAILFLILPIPPIIFSGHYIDISGYGYYVNM FLAFFNMLPIYPFDGSKVISWNFLVWLLIFIPLFVLTFF
Sequences:
>Translated_199_residues MGYRENIFSFNHIEIKDLIISSFLIALVFIWPRGFPTLNTGFLAQFIATFFTVGLAFILHELAHRTVARKFGAWSEFRAW YEGLAIAIVLKIILGFTFIAPGAVYIHKDYLTTKENALISLAGPLTNVTLAILFLILPIPPIIFSGHYIDISGYGYYVNM FLAFFNMLPIYPFDGSKVISWNFLVWLLIFIPLFVLTFF >Mature_198_residues GYRENIFSFNHIEIKDLIISSFLIALVFIWPRGFPTLNTGFLAQFIATFFTVGLAFILHELAHRTVARKFGAWSEFRAWY EGLAIAIVLKIILGFTFIAPGAVYIHKDYLTTKENALISLAGPLTNVTLAILFLILPIPPIIFSGHYIDISGYGYYVNMF LAFFNMLPIYPFDGSKVISWNFLVWLLIFIPLFVLTFF
Specific function: Unknown
COG id: COG1994
COG function: function code R; Zn-dependent proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M50B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 22737; Mature: 22606
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYRENIFSFNHIEIKDLIISSFLIALVFIWPRGFPTLNTGFLAQFIATFFTVGLAFILH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ELAHRTVARKFGAWSEFRAWYEGLAIAIVLKIILGFTFIAPGAVYIHKDYLTTKENALIS HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCCCEEE LAGPLTNVTLAILFLILPIPPIIFSGHYIDISGYGYYVNMFLAFFNMLPIYPFDGSKVIS ECCCHHHHHHHHHHHHHCCCHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEH WNFLVWLLIFIPLFVLTFF HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GYRENIFSFNHIEIKDLIISSFLIALVFIWPRGFPTLNTGFLAQFIATFFTVGLAFILH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ELAHRTVARKFGAWSEFRAWYEGLAIAIVLKIILGFTFIAPGAVYIHKDYLTTKENALIS HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCCCEEE LAGPLTNVTLAILFLILPIPPIIFSGHYIDISGYGYYVNMFLAFFNMLPIYPFDGSKVIS ECCCHHHHHHHHHHHHHCCCHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEH WNFLVWLLIFIPLFVLTFF HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]