Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399581

Identifier: 150399581

GI number: 150399581

Start: 860548

End: 861147

Strand: Reverse

Name: 150399581

Synonym: Mevan_0830

Alternate gene names: NA

Gene position: 861147-860548 (Counterclockwise)

Preceding gene: 150399582

Following gene: 150399580

Centisome position: 50.07

GC content: 31.83

Gene sequence:

>600_bases
ATGGGATACCGTGAAAACATATTTAGTTTTAACCACATTGAAATAAAAGACTTGATTATTTCTTCATTTTTAATCGCACT
TGTATTTATCTGGCCAAGGGGATTTCCAACGTTAAATACTGGCTTTTTAGCTCAGTTCATAGCTACATTTTTTACAGTTG
GACTTGCATTTATATTACACGAACTCGCCCATAGAACAGTTGCAAGAAAATTTGGAGCTTGGAGTGAATTTAGGGCATGG
TATGAAGGACTTGCAATTGCAATAGTTTTAAAAATAATTTTGGGATTTACATTTATTGCACCTGGGGCAGTATATATTCA
TAAAGATTATTTAACAACAAAAGAAAACGCCCTTATTTCCTTAGCTGGACCTTTAACAAATGTAACACTTGCAATTTTAT
TTTTGATACTACCAATACCTCCAATAATTTTTTCAGGACATTATATCGATATTTCAGGATATGGGTACTATGTAAACATG
TTTTTGGCATTTTTCAATATGCTTCCAATATATCCGTTTGACGGTTCAAAAGTAATCTCTTGGAATTTTTTAGTATGGCT
TTTAATATTTATTCCCCTATTTGTACTGACGTTCTTCTAA

Upstream 100 bases:

>100_bases
TTAAATTTACATCTTTAAATATTATTTAATACTTACTCAATATAATTTCAAAGCAAAAAATGTATAATACATGTTATTAA
AGTATAATTGGTGAATAATT

Downstream 100 bases:

>100_bases
AAAACATGGAATGATAAAATGGAATTTGACCTATGGGTTAGAATTATTAAAGAAAGTATCGAACAAAAGAATGTTGACCC
TTGGAACGTCAACATCTCTG

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MGYRENIFSFNHIEIKDLIISSFLIALVFIWPRGFPTLNTGFLAQFIATFFTVGLAFILHELAHRTVARKFGAWSEFRAW
YEGLAIAIVLKIILGFTFIAPGAVYIHKDYLTTKENALISLAGPLTNVTLAILFLILPIPPIIFSGHYIDISGYGYYVNM
FLAFFNMLPIYPFDGSKVISWNFLVWLLIFIPLFVLTFF

Sequences:

>Translated_199_residues
MGYRENIFSFNHIEIKDLIISSFLIALVFIWPRGFPTLNTGFLAQFIATFFTVGLAFILHELAHRTVARKFGAWSEFRAW
YEGLAIAIVLKIILGFTFIAPGAVYIHKDYLTTKENALISLAGPLTNVTLAILFLILPIPPIIFSGHYIDISGYGYYVNM
FLAFFNMLPIYPFDGSKVISWNFLVWLLIFIPLFVLTFF
>Mature_198_residues
GYRENIFSFNHIEIKDLIISSFLIALVFIWPRGFPTLNTGFLAQFIATFFTVGLAFILHELAHRTVARKFGAWSEFRAWY
EGLAIAIVLKIILGFTFIAPGAVYIHKDYLTTKENALISLAGPLTNVTLAILFLILPIPPIIFSGHYIDISGYGYYVNMF
LAFFNMLPIYPFDGSKVISWNFLVWLLIFIPLFVLTFF

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 22737; Mature: 22606

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYRENIFSFNHIEIKDLIISSFLIALVFIWPRGFPTLNTGFLAQFIATFFTVGLAFILH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ELAHRTVARKFGAWSEFRAWYEGLAIAIVLKIILGFTFIAPGAVYIHKDYLTTKENALIS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCCCEEE
LAGPLTNVTLAILFLILPIPPIIFSGHYIDISGYGYYVNMFLAFFNMLPIYPFDGSKVIS
ECCCHHHHHHHHHHHHHCCCHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEH
WNFLVWLLIFIPLFVLTFF
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GYRENIFSFNHIEIKDLIISSFLIALVFIWPRGFPTLNTGFLAQFIATFFTVGLAFILH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ELAHRTVARKFGAWSEFRAWYEGLAIAIVLKIILGFTFIAPGAVYIHKDYLTTKENALIS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCCCEEE
LAGPLTNVTLAILFLILPIPPIIFSGHYIDISGYGYYVNMFLAFFNMLPIYPFDGSKVIS
ECCCHHHHHHHHHHHHHCCCHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEH
WNFLVWLLIFIPLFVLTFF
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]