Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399290

Identifier: 150399290

GI number: 150399290

Start: 593222

End: 594700

Strand: Reverse

Name: 150399290

Synonym: Mevan_0538

Alternate gene names: NA

Gene position: 594700-593222 (Counterclockwise)

Preceding gene: 150399291

Following gene: 150399288

Centisome position: 34.57

GC content: 35.5

Gene sequence:

>1479_bases
ATGGGCTTTATTAAGTTAATTAAGGGTATGTTCTCAAAATCACCAAAGATTCAATATGCTAAATCACAATCTATCGATGT
AATGGATTTAAATCCAAAAAAAGTTGGCCCAAACCAGAGAATTTTACCGTATTACACGGTAGCTTCGGTTGAACTTGGAA
ATACAACCACTAAATCAATTATTTCTGCAACAGATATGGAATCTGGAAAAACTTACGTGGTATCAAAGGAAGTCAGGCTT
ACAAGGGATGTACGGCCACCTAAAAAAGGAGAGAAGGTTTTTGGACGTACAATATGGGATATTGAACTTACAAAAGAAGC
AGTTTCTGAAATGGTTAGGGATGTTTTAAAAGGAGCAATGGATAAAGCACATTTAAGTGTAAATGATATTCATTTTGTTG
TTAGGAGTACAGGTGTTACTGCTGGATTTGCATCTCCTGAAGAAGTTGGAATGATGATAGTATCCCTTGCTGAAGGTTGT
AGGATGGCAGGAATTCCAAATGGAAAAATGACGCCGATAATGACAAAAAAGCAGCTTCCAGAAATATTACAAGATTATAC
TTTAATAGATAAATTAATTTTTGATGGGGCAGTAACAGGAGTAGTTCCCCCAACTGGAAAAGAAGTAGTTGCAAATGAAA
TGGAAGGGGAACTTGTAACTGCAGGAATAAAAATTGGAAGCAAATGGACAGAAATTGATTACCGAAATCCCTGTATAAGT
ATAGACTTTGGTACAACCTTGGCAGGTAGGATTACTAATGATTCAGAACCTTATGCAAAAGTTGTAGGAAATTTATGTGG
TTTAGCAGGGGCAGTATGTGATTCAGTAGTTCGAGGAACTGATTTAGTAAATAAAAGGGGCGGTGCAGTTTTAGATATCA
TAAATACTAAAGGAAAACTTGATAAAGAACTTGCAAAAAAATATGCTGAAGAAATTCATAAATTTGTTATAATAAGAGAA
GTTCCAAAAGGCGTTTCCAGATTTGGAACAGTCCCAGTAAATCCTGAAAGTGCACAAAAAGCAGGTACATTTTTGATAGG
TTGTGACGTTGGTGAAAATGGTAGTGATATTTTTGAACTTGAAAAAATCGGAGCAAAAATTCTACAGGAATCAAATGTTC
CAACACTTCTTTATACGCTTGACATAGTTTCTGCAAAAATTACGCAAAGGCTCATAAAGTTAGCACATGATGAAAAAATA
GTATCTAAAGAAACTGCAATTGGAATTACTGGAAGAGCGGGAATTACTGGTGAAAAACCAAAATTGATAATTGAAATGCT
CTCAGAACTTGATATATGGGATGACGTTTCTAAAAATATTGTTTTTGTTGAAGATGGCCTTGCATTAGGTTCAAGTGTCA
TGGCAAGGTGCATGAACTGCCTTGGAACGCCAAAAATCCCAATTGGAGGTAATAGAAACGGACCCTGTATATTGGGACAG
AGAATAAAGCGTCAAAAAGAAATGGGAATGTTAAGATAA

Upstream 100 bases:

>100_bases
CAAAAATACCACATTTATATAATCAAATTTTCATAATTTATTAATGTTTTTTTAAATAATTATAATAATTTTGCAAGTTT
AGAGTATGGAGATGGTATAA

Downstream 100 bases:

>100_bases
TCTAAAAATTTTATTTTTTATTCTTTATTTTTAAAAAGTTATGTATGGAACTAATTTATAATATTTATCCTAATTAGTCC
TGAATGCCTTTTTCAGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MGFIKLIKGMFSKSPKIQYAKSQSIDVMDLNPKKVGPNQRILPYYTVASVELGNTTTKSIISATDMESGKTYVVSKEVRL
TRDVRPPKKGEKVFGRTIWDIELTKEAVSEMVRDVLKGAMDKAHLSVNDIHFVVRSTGVTAGFASPEEVGMMIVSLAEGC
RMAGIPNGKMTPIMTKKQLPEILQDYTLIDKLIFDGAVTGVVPPTGKEVVANEMEGELVTAGIKIGSKWTEIDYRNPCIS
IDFGTTLAGRITNDSEPYAKVVGNLCGLAGAVCDSVVRGTDLVNKRGGAVLDIINTKGKLDKELAKKYAEEIHKFVIIRE
VPKGVSRFGTVPVNPESAQKAGTFLIGCDVGENGSDIFELEKIGAKILQESNVPTLLYTLDIVSAKITQRLIKLAHDEKI
VSKETAIGITGRAGITGEKPKLIIEMLSELDIWDDVSKNIVFVEDGLALGSSVMARCMNCLGTPKIPIGGNRNGPCILGQ
RIKRQKEMGMLR

Sequences:

>Translated_492_residues
MGFIKLIKGMFSKSPKIQYAKSQSIDVMDLNPKKVGPNQRILPYYTVASVELGNTTTKSIISATDMESGKTYVVSKEVRL
TRDVRPPKKGEKVFGRTIWDIELTKEAVSEMVRDVLKGAMDKAHLSVNDIHFVVRSTGVTAGFASPEEVGMMIVSLAEGC
RMAGIPNGKMTPIMTKKQLPEILQDYTLIDKLIFDGAVTGVVPPTGKEVVANEMEGELVTAGIKIGSKWTEIDYRNPCIS
IDFGTTLAGRITNDSEPYAKVVGNLCGLAGAVCDSVVRGTDLVNKRGGAVLDIINTKGKLDKELAKKYAEEIHKFVIIRE
VPKGVSRFGTVPVNPESAQKAGTFLIGCDVGENGSDIFELEKIGAKILQESNVPTLLYTLDIVSAKITQRLIKLAHDEKI
VSKETAIGITGRAGITGEKPKLIIEMLSELDIWDDVSKNIVFVEDGLALGSSVMARCMNCLGTPKIPIGGNRNGPCILGQ
RIKRQKEMGMLR
>Mature_491_residues
GFIKLIKGMFSKSPKIQYAKSQSIDVMDLNPKKVGPNQRILPYYTVASVELGNTTTKSIISATDMESGKTYVVSKEVRLT
RDVRPPKKGEKVFGRTIWDIELTKEAVSEMVRDVLKGAMDKAHLSVNDIHFVVRSTGVTAGFASPEEVGMMIVSLAEGCR
MAGIPNGKMTPIMTKKQLPEILQDYTLIDKLIFDGAVTGVVPPTGKEVVANEMEGELVTAGIKIGSKWTEIDYRNPCISI
DFGTTLAGRITNDSEPYAKVVGNLCGLAGAVCDSVVRGTDLVNKRGGAVLDIINTKGKLDKELAKKYAEEIHKFVIIREV
PKGVSRFGTVPVNPESAQKAGTFLIGCDVGENGSDIFELEKIGAKILQESNVPTLLYTLDIVSAKITQRLIKLAHDEKIV
SKETAIGITGRAGITGEKPKLIIEMLSELDIWDDVSKNIVFVEDGLALGSSVMARCMNCLGTPKIPIGGNRNGPCILGQR
IKRQKEMGMLR

Specific function: Unknown

COG id: COG4065

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH1153 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008303 [H]

Pfam domain/function: PF09887 DUF2114 [H]

EC number: NA

Molecular weight: Translated: 53416; Mature: 53285

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFIKLIKGMFSKSPKIQYAKSQSIDVMDLNPKKVGPNQRILPYYTVASVELGNTTTKSI
CCHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCEEEEEEEEEEEECCCHHHHH
ISATDMESGKTYVVSKEVRLTRDVRPPKKGEKVFGRTIWDIELTKEAVSEMVRDVLKGAM
HHHCCCCCCCEEEEECCHHHHCCCCCCCCCCHHHCCEEEEEEHHHHHHHHHHHHHHHHHH
DKAHLSVNDIHFVVRSTGVTAGFASPEEVGMMIVSLAEGCRMAGIPNGKMTPIMTKKQLP
HHHCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHH
EILQDYTLIDKLIFDGAVTGVVPPTGKEVVANEMEGELVTAGIKIGSKWTEIDYRNPCIS
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCEEEECCCCCCEEE
IDFGTTLAGRITNDSEPYAKVVGNLCGLAGAVCDSVVRGTDLVNKRGGAVLDIINTKGKL
EECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH
DKELAKKYAEEIHKFVIIREVPKGVSRFGTVPVNPESAQKAGTFLIGCDVGENGSDIFEL
HHHHHHHHHHHHHHEEHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHH
EKIGAKILQESNVPTLLYTLDIVSAKITQRLIKLAHDEKIVSKETAIGITGRAGITGEKP
HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCH
KLIIEMLSELDIWDDVSKNIVFVEDGLALGSSVMARCMNCLGTPKIPIGGNRNGPCILGQ
HHHHHHHHHCCCHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHH
RIKRQKEMGMLR
HHHHHHHCCCCC
>Mature Secondary Structure 
GFIKLIKGMFSKSPKIQYAKSQSIDVMDLNPKKVGPNQRILPYYTVASVELGNTTTKSI
CHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCEEEEEEEEEEEECCCHHHHH
ISATDMESGKTYVVSKEVRLTRDVRPPKKGEKVFGRTIWDIELTKEAVSEMVRDVLKGAM
HHHCCCCCCCEEEEECCHHHHCCCCCCCCCCHHHCCEEEEEEHHHHHHHHHHHHHHHHHH
DKAHLSVNDIHFVVRSTGVTAGFASPEEVGMMIVSLAEGCRMAGIPNGKMTPIMTKKQLP
HHHCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHH
EILQDYTLIDKLIFDGAVTGVVPPTGKEVVANEMEGELVTAGIKIGSKWTEIDYRNPCIS
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCEEEECCCCCCEEE
IDFGTTLAGRITNDSEPYAKVVGNLCGLAGAVCDSVVRGTDLVNKRGGAVLDIINTKGKL
EECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH
DKELAKKYAEEIHKFVIIREVPKGVSRFGTVPVNPESAQKAGTFLIGCDVGENGSDIFEL
HHHHHHHHHHHHHHEEHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHH
EKIGAKILQESNVPTLLYTLDIVSAKITQRLIKLAHDEKIVSKETAIGITGRAGITGEKP
HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCH
KLIIEMLSELDIWDDVSKNIVFVEDGLALGSSVMARCMNCLGTPKIPIGGNRNGPCILGQ
HHHHHHHHHCCCHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHH
RIKRQKEMGMLR
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]