| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399290
Identifier: 150399290
GI number: 150399290
Start: 593222
End: 594700
Strand: Reverse
Name: 150399290
Synonym: Mevan_0538
Alternate gene names: NA
Gene position: 594700-593222 (Counterclockwise)
Preceding gene: 150399291
Following gene: 150399288
Centisome position: 34.57
GC content: 35.5
Gene sequence:
>1479_bases ATGGGCTTTATTAAGTTAATTAAGGGTATGTTCTCAAAATCACCAAAGATTCAATATGCTAAATCACAATCTATCGATGT AATGGATTTAAATCCAAAAAAAGTTGGCCCAAACCAGAGAATTTTACCGTATTACACGGTAGCTTCGGTTGAACTTGGAA ATACAACCACTAAATCAATTATTTCTGCAACAGATATGGAATCTGGAAAAACTTACGTGGTATCAAAGGAAGTCAGGCTT ACAAGGGATGTACGGCCACCTAAAAAAGGAGAGAAGGTTTTTGGACGTACAATATGGGATATTGAACTTACAAAAGAAGC AGTTTCTGAAATGGTTAGGGATGTTTTAAAAGGAGCAATGGATAAAGCACATTTAAGTGTAAATGATATTCATTTTGTTG TTAGGAGTACAGGTGTTACTGCTGGATTTGCATCTCCTGAAGAAGTTGGAATGATGATAGTATCCCTTGCTGAAGGTTGT AGGATGGCAGGAATTCCAAATGGAAAAATGACGCCGATAATGACAAAAAAGCAGCTTCCAGAAATATTACAAGATTATAC TTTAATAGATAAATTAATTTTTGATGGGGCAGTAACAGGAGTAGTTCCCCCAACTGGAAAAGAAGTAGTTGCAAATGAAA TGGAAGGGGAACTTGTAACTGCAGGAATAAAAATTGGAAGCAAATGGACAGAAATTGATTACCGAAATCCCTGTATAAGT ATAGACTTTGGTACAACCTTGGCAGGTAGGATTACTAATGATTCAGAACCTTATGCAAAAGTTGTAGGAAATTTATGTGG TTTAGCAGGGGCAGTATGTGATTCAGTAGTTCGAGGAACTGATTTAGTAAATAAAAGGGGCGGTGCAGTTTTAGATATCA TAAATACTAAAGGAAAACTTGATAAAGAACTTGCAAAAAAATATGCTGAAGAAATTCATAAATTTGTTATAATAAGAGAA GTTCCAAAAGGCGTTTCCAGATTTGGAACAGTCCCAGTAAATCCTGAAAGTGCACAAAAAGCAGGTACATTTTTGATAGG TTGTGACGTTGGTGAAAATGGTAGTGATATTTTTGAACTTGAAAAAATCGGAGCAAAAATTCTACAGGAATCAAATGTTC CAACACTTCTTTATACGCTTGACATAGTTTCTGCAAAAATTACGCAAAGGCTCATAAAGTTAGCACATGATGAAAAAATA GTATCTAAAGAAACTGCAATTGGAATTACTGGAAGAGCGGGAATTACTGGTGAAAAACCAAAATTGATAATTGAAATGCT CTCAGAACTTGATATATGGGATGACGTTTCTAAAAATATTGTTTTTGTTGAAGATGGCCTTGCATTAGGTTCAAGTGTCA TGGCAAGGTGCATGAACTGCCTTGGAACGCCAAAAATCCCAATTGGAGGTAATAGAAACGGACCCTGTATATTGGGACAG AGAATAAAGCGTCAAAAAGAAATGGGAATGTTAAGATAA
Upstream 100 bases:
>100_bases CAAAAATACCACATTTATATAATCAAATTTTCATAATTTATTAATGTTTTTTTAAATAATTATAATAATTTTGCAAGTTT AGAGTATGGAGATGGTATAA
Downstream 100 bases:
>100_bases TCTAAAAATTTTATTTTTTATTCTTTATTTTTAAAAAGTTATGTATGGAACTAATTTATAATATTTATCCTAATTAGTCC TGAATGCCTTTTTCAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MGFIKLIKGMFSKSPKIQYAKSQSIDVMDLNPKKVGPNQRILPYYTVASVELGNTTTKSIISATDMESGKTYVVSKEVRL TRDVRPPKKGEKVFGRTIWDIELTKEAVSEMVRDVLKGAMDKAHLSVNDIHFVVRSTGVTAGFASPEEVGMMIVSLAEGC RMAGIPNGKMTPIMTKKQLPEILQDYTLIDKLIFDGAVTGVVPPTGKEVVANEMEGELVTAGIKIGSKWTEIDYRNPCIS IDFGTTLAGRITNDSEPYAKVVGNLCGLAGAVCDSVVRGTDLVNKRGGAVLDIINTKGKLDKELAKKYAEEIHKFVIIRE VPKGVSRFGTVPVNPESAQKAGTFLIGCDVGENGSDIFELEKIGAKILQESNVPTLLYTLDIVSAKITQRLIKLAHDEKI VSKETAIGITGRAGITGEKPKLIIEMLSELDIWDDVSKNIVFVEDGLALGSSVMARCMNCLGTPKIPIGGNRNGPCILGQ RIKRQKEMGMLR
Sequences:
>Translated_492_residues MGFIKLIKGMFSKSPKIQYAKSQSIDVMDLNPKKVGPNQRILPYYTVASVELGNTTTKSIISATDMESGKTYVVSKEVRL TRDVRPPKKGEKVFGRTIWDIELTKEAVSEMVRDVLKGAMDKAHLSVNDIHFVVRSTGVTAGFASPEEVGMMIVSLAEGC RMAGIPNGKMTPIMTKKQLPEILQDYTLIDKLIFDGAVTGVVPPTGKEVVANEMEGELVTAGIKIGSKWTEIDYRNPCIS IDFGTTLAGRITNDSEPYAKVVGNLCGLAGAVCDSVVRGTDLVNKRGGAVLDIINTKGKLDKELAKKYAEEIHKFVIIRE VPKGVSRFGTVPVNPESAQKAGTFLIGCDVGENGSDIFELEKIGAKILQESNVPTLLYTLDIVSAKITQRLIKLAHDEKI VSKETAIGITGRAGITGEKPKLIIEMLSELDIWDDVSKNIVFVEDGLALGSSVMARCMNCLGTPKIPIGGNRNGPCILGQ RIKRQKEMGMLR >Mature_491_residues GFIKLIKGMFSKSPKIQYAKSQSIDVMDLNPKKVGPNQRILPYYTVASVELGNTTTKSIISATDMESGKTYVVSKEVRLT RDVRPPKKGEKVFGRTIWDIELTKEAVSEMVRDVLKGAMDKAHLSVNDIHFVVRSTGVTAGFASPEEVGMMIVSLAEGCR MAGIPNGKMTPIMTKKQLPEILQDYTLIDKLIFDGAVTGVVPPTGKEVVANEMEGELVTAGIKIGSKWTEIDYRNPCISI DFGTTLAGRITNDSEPYAKVVGNLCGLAGAVCDSVVRGTDLVNKRGGAVLDIINTKGKLDKELAKKYAEEIHKFVIIREV PKGVSRFGTVPVNPESAQKAGTFLIGCDVGENGSDIFELEKIGAKILQESNVPTLLYTLDIVSAKITQRLIKLAHDEKIV SKETAIGITGRAGITGEKPKLIIEMLSELDIWDDVSKNIVFVEDGLALGSSVMARCMNCLGTPKIPIGGNRNGPCILGQR IKRQKEMGMLR
Specific function: Unknown
COG id: COG4065
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH1153 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008303 [H]
Pfam domain/function: PF09887 DUF2114 [H]
EC number: NA
Molecular weight: Translated: 53416; Mature: 53285
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFIKLIKGMFSKSPKIQYAKSQSIDVMDLNPKKVGPNQRILPYYTVASVELGNTTTKSI CCHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCEEEEEEEEEEEECCCHHHHH ISATDMESGKTYVVSKEVRLTRDVRPPKKGEKVFGRTIWDIELTKEAVSEMVRDVLKGAM HHHCCCCCCCEEEEECCHHHHCCCCCCCCCCHHHCCEEEEEEHHHHHHHHHHHHHHHHHH DKAHLSVNDIHFVVRSTGVTAGFASPEEVGMMIVSLAEGCRMAGIPNGKMTPIMTKKQLP HHHCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHH EILQDYTLIDKLIFDGAVTGVVPPTGKEVVANEMEGELVTAGIKIGSKWTEIDYRNPCIS HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCEEEECCCCCCEEE IDFGTTLAGRITNDSEPYAKVVGNLCGLAGAVCDSVVRGTDLVNKRGGAVLDIINTKGKL EECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH DKELAKKYAEEIHKFVIIREVPKGVSRFGTVPVNPESAQKAGTFLIGCDVGENGSDIFEL HHHHHHHHHHHHHHEEHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHH EKIGAKILQESNVPTLLYTLDIVSAKITQRLIKLAHDEKIVSKETAIGITGRAGITGEKP HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCH KLIIEMLSELDIWDDVSKNIVFVEDGLALGSSVMARCMNCLGTPKIPIGGNRNGPCILGQ HHHHHHHHHCCCHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHH RIKRQKEMGMLR HHHHHHHCCCCC >Mature Secondary Structure GFIKLIKGMFSKSPKIQYAKSQSIDVMDLNPKKVGPNQRILPYYTVASVELGNTTTKSI CHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCEEEEEEEEEEEECCCHHHHH ISATDMESGKTYVVSKEVRLTRDVRPPKKGEKVFGRTIWDIELTKEAVSEMVRDVLKGAM HHHCCCCCCCEEEEECCHHHHCCCCCCCCCCHHHCCEEEEEEHHHHHHHHHHHHHHHHHH DKAHLSVNDIHFVVRSTGVTAGFASPEEVGMMIVSLAEGCRMAGIPNGKMTPIMTKKQLP HHHCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHH EILQDYTLIDKLIFDGAVTGVVPPTGKEVVANEMEGELVTAGIKIGSKWTEIDYRNPCIS HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCEEEECCCCCCEEE IDFGTTLAGRITNDSEPYAKVVGNLCGLAGAVCDSVVRGTDLVNKRGGAVLDIINTKGKL EECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH DKELAKKYAEEIHKFVIIREVPKGVSRFGTVPVNPESAQKAGTFLIGCDVGENGSDIFEL HHHHHHHHHHHHHHEEHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHH EKIGAKILQESNVPTLLYTLDIVSAKITQRLIKLAHDEKIVSKETAIGITGRAGITGEKP HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCH KLIIEMLSELDIWDDVSKNIVFVEDGLALGSSVMARCMNCLGTPKIPIGGNRNGPCILGQ HHHHHHHHHCCCHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHH RIKRQKEMGMLR HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]