Click here to switch to the map view.

The map label for this gene is yjbQ [C]

Identifier: 150399204

GI number: 150399204

Start: 505655

End: 506053

Strand: Reverse

Name: yjbQ [C]

Synonym: Mevan_0452

Alternate gene names: 150399204

Gene position: 506053-505655 (Counterclockwise)

Preceding gene: 150399205

Following gene: 150399203

Centisome position: 29.42

GC content: 31.58

Gene sequence:

>399_bases
ATGTTTTTTGAGTATTCGCTAAAAACTAAGTTTAGGGAAGAATTAATTGATATTTCAAGTCAAATTAGGGAATCTCTGGA
AAAATCAAAGGTATTGGAAGGAATTATTGTAGTTTTTACGCCACATACTACCTCAGCAATTACCATAAATGAAAATGCAG
ACCCTTCCGTTAAAAAAGACATTATAAAATTTTTAAACGAAAAAATACCTTCTAACTATGACTTTTCACATTATGAAGGC
AATTCTGATGCGCATTTAAAAAGTTCGTTTTTTGGCCCATCACTAACTTTAATCGTAAAAAATGGAAAATTAATTCTTGG
AACGTGGCAAGGGGTTTATTTTTGCGAGTTTGACGGCCCAAAAAGCAGAAATTTTTACGTAAAAGTAATCCGTGGATAA

Upstream 100 bases:

>100_bases
ATGGCTGCAATTTTAAGATATAAAATATAAATTACCAATCTAACACTTTTTAACTATTTTGGATAAATTGCATATATTTT
GGATTTTATTGGTGGTTTTC

Downstream 100 bases:

>100_bases
AGATTCAATTCCAGTTACCGAGCAATTTTTTGAAATACTTAAAAAGTAAATGATTTATAATGTAAATACGAAAGATTAAT
AAACATTTTTAAACCAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MFFEYSLKTKFREELIDISSQIRESLEKSKVLEGIIVVFTPHTTSAITINENADPSVKKDIIKFLNEKIPSNYDFSHYEG
NSDAHLKSSFFGPSLTLIVKNGKLILGTWQGVYFCEFDGPKSRNFYVKVIRG

Sequences:

>Translated_132_residues
MFFEYSLKTKFREELIDISSQIRESLEKSKVLEGIIVVFTPHTTSAITINENADPSVKKDIIKFLNEKIPSNYDFSHYEG
NSDAHLKSSFFGPSLTLIVKNGKLILGTWQGVYFCEFDGPKSRNFYVKVIRG
>Mature_132_residues
MFFEYSLKTKFREELIDISSQIRESLEKSKVLEGIIVVFTPHTTSAITINENADPSVKKDIIKFLNEKIPSNYDFSHYEG
NSDAHLKSSFFGPSLTLIVKNGKLILGTWQGVYFCEFDGPKSRNFYVKVIRG

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=86, Percent_Identity=40.6976744186046, Blast_Score=80, Evalue=5e-17,
Organism=Drosophila melanogaster, GI221476589, Length=92, Percent_Identity=41.304347826087, Blast_Score=80, Evalue=4e-16,
Organism=Drosophila melanogaster, GI221476594, Length=92, Percent_Identity=41.304347826087, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15090; Mature: 15090

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFEYSLKTKFREELIDISSQIRESLEKSKVLEGIIVVFTPHTTSAITINENADPSVKKD
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEECCCCCCHHHHH
IIKFLNEKIPSNYDFSHYEGNSDAHLKSSFFGPSLTLIVKNGKLILGTWQGVYFCEFDGP
HHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCEEEEEECCCEEEEEECCC
KSRNFYVKVIRG
CCCCEEEEEECC
>Mature Secondary Structure
MFFEYSLKTKFREELIDISSQIRESLEKSKVLEGIIVVFTPHTTSAITINENADPSVKKD
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEECCCCCCHHHHH
IIKFLNEKIPSNYDFSHYEGNSDAHLKSSFFGPSLTLIVKNGKLILGTWQGVYFCEFDGP
HHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCEEEEEECCCEEEEEECCC
KSRNFYVKVIRG
CCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]