| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is glmU [C]
Identifier: 150399152
GI number: 150399152
Start: 451815
End: 453059
Strand: Reverse
Name: glmU [C]
Synonym: Mevan_0399
Alternate gene names: 150399152
Gene position: 453059-451815 (Counterclockwise)
Preceding gene: 150399153
Following gene: 150399151
Centisome position: 26.34
GC content: 29.88
Gene sequence:
>1245_bases ATGGATGCAGTAATATTATGTGCCGGAAGTGGAACAAGACTTTATCCTATAACCGAAAATCGTCCAAAACCAATGATCCC AATTGCGGGAAAACCAATACTTGAACATATTATTGAAAAAATTGAAAATCACGTTGAAAAAATATACTTGGTAGTTGGTT TTGAAAAAGAAAAAATAATAGATTATTTTTACGGGAATGAAAAAATAGAATTTATAGTTCAAGAAAAACAGCTTGGAACG GGGCATGCTGTATTAATGGCTAAAAACTACATAAAAGGAGATTTTTTAGTCTTAAATGGGGATGTAATTTTTGAAAGCGA TATTTTGGAATTTTTAAATTATGAAAATGCTGTTGGCTTATCAAAAGTAGATAATCCTGAAAATTTTGGAGTAATTGAGC TTGGATACGATAATAAAGTTATAAATTTACTTGAAAAACCAAATGAAGATGAAATAAAATCAAAATTTACATCAAATTTG ATAAATGCTGGAATTTATAAACTGGAAAATTTTGTTTTTGAAATTTTGGAAAATCTGCTTCCTTCAGAACGGGGGGAAAT TGAATTAACCGATGCCTTAAAAAAACTAATTGAAAGCAGTAAACTTTATGGAATTGAATTAAACGGGTACTGGAACGATA TTGGGAGGCCTTGGGACGTTTTAAGTGCAAATAATTATTTTTTAAAAAATATAATGCCAAAAATTTCTGGAAATATTGAA AATAATGTAACAATCACAGGAAATGTTATTATTGAAGAAGGAGTAACTGTAAAATCAAATTCAGTAATTGAAGGGCCAGT AATTATAAAATCAGGTGCATTTATTGGGCCTTTAGCATATATAAGGCCAAATACTGTTTTAATGGAAGATACTTTTGTTG GAAATTCTTCTGAGATTAAAGGGAGTATTATAATGAAAAATACTAAAATACCGCATCTTTCGTATGTTGGGGATAGTATT ATCGGTTCAGACTGTAATTTTGGATGTAACACGATAACCGCAAATTTAAGGTTTGATGACGAACCAGTTACTCTAAATAT TAAGGGTACGAAGGTAAAAAGTGTCAGGAAATTTGGTGCAGTTATCGGCGACAATGTAAAAACAGGAATTCAAGTTTCAT TAATGCCTGGCGTTAAAGTTGGGAGTAATTCAATTATTGGTGCAAATTGCCTAGTTGATAAAGATATTGAAAAAGAAAGC TTTGTTTATAAAAAAGACGAATTAATAATTAAAAAGAGGAATTAA
Upstream 100 bases:
>100_bases AGAGTTAGAGTTGAAGCAAAAGATGAAACGTTTGCAAATGAACTGTTAAATAACGGAATTTCGCTTGTAAATAACGGAAT TTTGAAATAAGGGGGAAAAT
Downstream 100 bases:
>100_bases AATGATTATTGGTCCAAATATTTCAAAAGAATTTTTATCCGATTTAAAAGAAGGCCAGCTTCAACAGTGTGGGATTGACT TAAAACTTGATAAAATCTAT
Product: nucleotidyl transferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MDAVILCAGSGTRLYPITENRPKPMIPIAGKPILEHIIEKIENHVEKIYLVVGFEKEKIIDYFYGNEKIEFIVQEKQLGT GHAVLMAKNYIKGDFLVLNGDVIFESDILEFLNYENAVGLSKVDNPENFGVIELGYDNKVINLLEKPNEDEIKSKFTSNL INAGIYKLENFVFEILENLLPSERGEIELTDALKKLIESSKLYGIELNGYWNDIGRPWDVLSANNYFLKNIMPKISGNIE NNVTITGNVIIEEGVTVKSNSVIEGPVIIKSGAFIGPLAYIRPNTVLMEDTFVGNSSEIKGSIIMKNTKIPHLSYVGDSI IGSDCNFGCNTITANLRFDDEPVTLNIKGTKVKSVRKFGAVIGDNVKTGIQVSLMPGVKVGSNSIIGANCLVDKDIEKES FVYKKDELIIKKRN
Sequences:
>Translated_414_residues MDAVILCAGSGTRLYPITENRPKPMIPIAGKPILEHIIEKIENHVEKIYLVVGFEKEKIIDYFYGNEKIEFIVQEKQLGT GHAVLMAKNYIKGDFLVLNGDVIFESDILEFLNYENAVGLSKVDNPENFGVIELGYDNKVINLLEKPNEDEIKSKFTSNL INAGIYKLENFVFEILENLLPSERGEIELTDALKKLIESSKLYGIELNGYWNDIGRPWDVLSANNYFLKNIMPKISGNIE NNVTITGNVIIEEGVTVKSNSVIEGPVIIKSGAFIGPLAYIRPNTVLMEDTFVGNSSEIKGSIIMKNTKIPHLSYVGDSI IGSDCNFGCNTITANLRFDDEPVTLNIKGTKVKSVRKFGAVIGDNVKTGIQVSLMPGVKVGSNSIIGANCLVDKDIEKES FVYKKDELIIKKRN >Mature_414_residues MDAVILCAGSGTRLYPITENRPKPMIPIAGKPILEHIIEKIENHVEKIYLVVGFEKEKIIDYFYGNEKIEFIVQEKQLGT GHAVLMAKNYIKGDFLVLNGDVIFESDILEFLNYENAVGLSKVDNPENFGVIELGYDNKVINLLEKPNEDEIKSKFTSNL INAGIYKLENFVFEILENLLPSERGEIELTDALKKLIESSKLYGIELNGYWNDIGRPWDVLSANNYFLKNIMPKISGNIE NNVTITGNVIIEEGVTVKSNSVIEGPVIIKSGAFIGPLAYIRPNTVLMEDTFVGNSSEIKGSIIMKNTKIPHLSYVGDSI IGSDCNFGCNTITANLRFDDEPVTLNIKGTKVKSVRKFGAVIGDNVKTGIQVSLMPGVKVGSNSIIGANCLVDKDIEKES FVYKKDELIIKKRN
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP- GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1- P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcN
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family
Homologues:
Organism=Homo sapiens, GI11761621, Length=344, Percent_Identity=27.906976744186, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI11761619, Length=344, Percent_Identity=27.3255813953488, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI1790168, Length=461, Percent_Identity=26.0303687635575, Blast_Score=124, Evalue=8e-30, Organism=Escherichia coli, GI1788351, Length=240, Percent_Identity=28.75, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1790224, Length=243, Percent_Identity=27.5720164609054, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1788355, Length=282, Percent_Identity=24.468085106383, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1787488, Length=262, Percent_Identity=28.2442748091603, Blast_Score=73, Evalue=4e-14, Organism=Caenorhabditis elegans, GI133931050, Length=356, Percent_Identity=30.0561797752809, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17509979, Length=343, Percent_Identity=27.1137026239067, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17509981, Length=332, Percent_Identity=26.5060240963855, Blast_Score=88, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6320148, Length=345, Percent_Identity=31.5942028985507, Blast_Score=139, Evalue=7e-34, Organism=Drosophila melanogaster, GI21355443, Length=341, Percent_Identity=28.4457478005865, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI24644084, Length=341, Percent_Identity=28.4457478005865, Blast_Score=126, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMU_METVS (A6UP85)
Other databases:
- EMBL: CP000742 - RefSeq: YP_001322919.1 - ProteinModelPortal: A6UP85 - SMR: A6UP85 - STRING: A6UP85 - GeneID: 5325640 - GenomeReviews: CP000742_GR - KEGG: mvn:Mevan_0399 - eggNOG: arNOG04117 - HOGENOM: HBG688195 - OMA: GPNCFIR - ProtClustDB: CLSK876450 - InterPro: IPR005835 - InterPro: IPR011004
Pfam domain/function: PF00483 NTP_transferase; SSF51161 Trimer_LpxA_like
EC number: =2.7.7.23; =2.3.1.157
Molecular weight: Translated: 45990; Mature: 45990
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: ACT_SITE 312-312 BINDING 74-74 BINDING 79-79 BINDING 80-80 BINDING 130-130 BINDING 142-142 BINDING 162-162 BINDING 388-388 BINDING 405-405
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVILCAGSGTRLYPITENRPKPMIPIAGKPILEHIIEKIENHVEKIYLVVGFEKEKII CCEEEEECCCCCEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHEEEEEEEECCHHHEE DYFYGNEKIEFIVQEKQLGTGHAVLMAKNYIKGDFLVLNGDVIFESDILEFLNYENAVGL EEEECCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCEEEHHHHHHHHCCCCCCCC SKVDNPENFGVIELGYDNKVINLLEKPNEDEIKSKFTSNLINAGIYKLENFVFEILENLL CCCCCCCCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PSERGEIELTDALKKLIESSKLYGIELNGYWNDIGRPWDVLSANNYFLKNIMPKISGNIE CCCCCCEEHHHHHHHHHCCCCEEEEEECCEECCCCCCEEEECCCCEEHHHHHHHHCCCCC NNVTITGNVIIEEGVTVKSNSVIEGPVIIKSGAFIGPLAYIRPNTVLMEDTFVGNSSEIK CCEEEEEEEEEECCEEEECCCEEECCEEEECCCCCCCEEEECCCEEEEEEEECCCCCCCC GSIIMKNTKIPHLSYVGDSIIGSDCNFGCNTITANLRFDDEPVTLNIKGTKVKSVRKFGA EEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHHHHHHHH VIGDNVKTGIQVSLMPGVKVGSNSIIGANCLVDKDIEKESFVYKKDELIIKKRN HHCCCCCCCEEEEEECCEEECCCCEEEEEEEECCCCCCCCEEEECCEEEEEECC >Mature Secondary Structure MDAVILCAGSGTRLYPITENRPKPMIPIAGKPILEHIIEKIENHVEKIYLVVGFEKEKII CCEEEEECCCCCEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHEEEEEEEECCHHHEE DYFYGNEKIEFIVQEKQLGTGHAVLMAKNYIKGDFLVLNGDVIFESDILEFLNYENAVGL EEEECCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCEEEHHHHHHHHCCCCCCCC SKVDNPENFGVIELGYDNKVINLLEKPNEDEIKSKFTSNLINAGIYKLENFVFEILENLL CCCCCCCCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PSERGEIELTDALKKLIESSKLYGIELNGYWNDIGRPWDVLSANNYFLKNIMPKISGNIE CCCCCCEEHHHHHHHHHCCCCEEEEEECCEECCCCCCEEEECCCCEEHHHHHHHHCCCCC NNVTITGNVIIEEGVTVKSNSVIEGPVIIKSGAFIGPLAYIRPNTVLMEDTFVGNSSEIK CCEEEEEEEEEECCEEEECCCEEECCEEEECCCCCCCEEEECCCEEEEEEEECCCCCCCC GSIIMKNTKIPHLSYVGDSIIGSDCNFGCNTITANLRFDDEPVTLNIKGTKVKSVRKFGA EEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHHHHHHHH VIGDNVKTGIQVSLMPGVKVGSNSIIGANCLVDKDIEKESFVYKKDELIIKKRN HHCCCCCCCEEEEEECCEEECCCCEEEEEEEECCCCCCCCEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA