Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

Click here to switch to the map view.

The map label for this gene is 150399088

Identifier: 150399088

GI number: 150399088

Start: 383017

End: 383532

Strand: Reverse

Name: 150399088

Synonym: Mevan_0334

Alternate gene names: NA

Gene position: 383532-383017 (Counterclockwise)

Preceding gene: 150399089

Following gene: 150399087

Centisome position: 22.3

GC content: 26.74

Gene sequence:

>516_bases
ATGGATAAAAACTACTTTTTTATTTTATTCATTTTTTTAATATTTTATTTGGGGATTTTTTTTGCACCTTATTTTATGAA
TTTATCTTTTGATTCGCCATTTTTTAGCGTAATTTCCATGATTATTTATCAAATGTATTCAATGACGTGCCACCAGCTTT
CTGAAAGGTCTTATTTTATCTTTGACCATAAAATGGCAGTTTGTGCAAGATGTTTTGGAATATATACTGGTTTTTTGGTA
GGTTTAGTAATTTACTCCTTATTTAGTAGAATAATTAATTATAAAACCCTTTCAAAATGGTATCTGATAATATCACTTTT
ACCAATGGCAATTGATGGAACAAGCCAACTTTTTGGTTTAAGGGAAAGTTTCAATTTAATGAGGCTTTTGACGGGATTAT
TATTTGGATTTACCGTTGTATTTTATGTACTACCTGTTTTTTTGGAAGTTATGAATAATACTACCAAAGAGGATATAAAA
ACTATTTTTAAATCATTTAGGGTAAAAAAAAGATAA

Upstream 100 bases:

>100_bases
TGCAGCCGGTGGAATTATCGGAATAATCTTTGCAGTAATATTTGGCGCAATATCTGGAGCAATCGGGTCAGTAGTATACT
CTAAAATAAAAGGAATTTAA

Downstream 100 bases:

>100_bases
TTCTAACAAAAAATAGTCTTTTAAAATCAATTGAAAGTAATTAAAAACAATGTAAATTTGAAAATGGAGTTACTAATTTT
AGATAATTATTTATACTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MDKNYFFILFIFLIFYLGIFFAPYFMNLSFDSPFFSVISMIIYQMYSMTCHQLSERSYFIFDHKMAVCARCFGIYTGFLV
GLVIYSLFSRIINYKTLSKWYLIISLLPMAIDGTSQLFGLRESFNLMRLLTGLLFGFTVVFYVLPVFLEVMNNTTKEDIK
TIFKSFRVKKR

Sequences:

>Translated_171_residues
MDKNYFFILFIFLIFYLGIFFAPYFMNLSFDSPFFSVISMIIYQMYSMTCHQLSERSYFIFDHKMAVCARCFGIYTGFLV
GLVIYSLFSRIINYKTLSKWYLIISLLPMAIDGTSQLFGLRESFNLMRLLTGLLFGFTVVFYVLPVFLEVMNNTTKEDIK
TIFKSFRVKKR
>Mature_171_residues
MDKNYFFILFIFLIFYLGIFFAPYFMNLSFDSPFFSVISMIIYQMYSMTCHQLSERSYFIFDHKMAVCARCFGIYTGFLV
GLVIYSLFSRIINYKTLSKWYLIISLLPMAIDGTSQLFGLRESFNLMRLLTGLLFGFTVVFYVLPVFLEVMNNTTKEDIK
TIFKSFRVKKR

Specific function: Unknown

COG id: COG3815

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019206 [H]

Pfam domain/function: PF09858 DUF2085 [H]

EC number: NA

Molecular weight: Translated: 20254; Mature: 20254

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNYFFILFIFLIFYLGIFFAPYFMNLSFDSPFFSVISMIIYQMYSMTCHQLSERSYFI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE
FDHKMAVCARCFGIYTGFLVGLVIYSLFSRIINYKTLSKWYLIISLLPMAIDGTSQLFGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RESFNLMRLLTGLLFGFTVVFYVLPVFLEVMNNTTKEDIKTIFKSFRVKKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDKNYFFILFIFLIFYLGIFFAPYFMNLSFDSPFFSVISMIIYQMYSMTCHQLSERSYFI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE
FDHKMAVCARCFGIYTGFLVGLVIYSLFSRIINYKTLSKWYLIISLLPMAIDGTSQLFGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RESFNLMRLLTGLLFGFTVVFYVLPVFLEVMNNTTKEDIKTIFKSFRVKKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]