| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is cca [H]
Identifier: 150398994
GI number: 150398994
Start: 283512
End: 284852
Strand: Reverse
Name: cca [H]
Synonym: Mevan_0240
Alternate gene names: 150398994
Gene position: 284852-283512 (Counterclockwise)
Preceding gene: 150398995
Following gene: 150398993
Centisome position: 16.56
GC content: 26.55
Gene sequence:
>1341_bases TTGAAAGAAATACTTGAAAATTCTATGGGTATACAAAAAGTACTAAACGAAGTTTTAACTGATATCTCTCCAACAGATTC AGAAAAAGAAGAATTAACGTTATTTTCTAATGCAGTACTACATAAATTAAAAAGTATTTCTGAATATCCCATCTTAGATA TAATACAAGTTGGTTCTACAGCAAGAAATGCTAATTTAAAAAATGACCATGATATTGATATTTTTTTAAGATTTGAAAGA AATACTGAGCGAGAAACCCTAAAAGAAGTAGGTTTACGGGTTGGAAAAGAAGTAATTGATTATTTTGGCGGAATATCTTG GTTAGAATATGCTGAACATCCATATATATCTGGAAAAATTGGAAAATTTTCATTAGATATTGTTCCATGCTATAAAATCG AAAACTGTGAAAAAATAATATCTGCCGTAGATAGAACGCCACTACATAATGAATTTTTAGTGTTGGCTAGTTTAAAAACA GACATTTCAAATGAAGTCCGTCTTTTAAAAAAATTTTTAAAAGGACTTTCAATATATGGTTCAGACCTAAAAACTGCCGG TTTTTCAGGATATTTATGCGAACTTTTAATATTAAAATATGGGAGTTTTTTAAATTTACTAAACGATGTAAAAACTTGGA AACTTAAAAAAGTAATAGTTTTAGATGAAATTTACGAAATGTATGGTTTAAAAAATGACCATAAATTTTTAGAATTTAAT GATTCACTTATTGTTTATGACCCTGTAGATTTAAATAGAAACGTTGCCGCTGCATTAAGCCTTGAAAACTATTGTAAATT CATATTTTATTCTAAAATGTTTTTAATGAACCCAAATAAAGAATTTTTTTATAATTTTGAAAAAAAAACCATTAATAAAT TAAATGAAAGAAGTCACGGGTATTTTTTAACTATTGAAATAAAACGTCCAGAAAACGTTGTTGAAGATATAGTTTATCCT CAAATGGAAAAATTACAAAAAAGTATTAATAAGCTTATTAAAGAACATGATTTTGATTATTTAAGATATACCAATTTTGC AGATGAAAAAGTCTGCTATCTTTCATGGGAGTTTTTAGTACACGAATTACCTGATGTAAAATTAAGGGTGGGCCCCCCAG TTAGCAGTTCTTTTGGAGTTTTAAATTTTATAAAAAATAACGAAAAATATTTTGTTTCAGGGTGCAATGTTTGTGCATAC AAAAACAGAAAATATAAAAATGTACAGATACTATTCAATAATATCGTAAATGGGAAATTAAAAGGTCAGATAACCTATCC AAAATATATCTGTCCTGAAAATGCATTAATTAATATTGGAACTTTTGTAGAAAGAATTTAA
Upstream 100 bases:
>100_bases TTACTGTCCAGTATAAAGGCCAAATCAAACATACGGTTTAATTGATTAAGTAGTGTTTATTTTTTTAGTATTTTTTTATT TTTAACATAAGGTGGATATT
Downstream 100 bases:
>100_bases ATTTAATTTGGGAAATCATGGACAGTAGTGTCTTGATACAGCAATGCAACGAATTTTTAGATGGGCTATCTAATTTTGGA GATAATTTTAAAAAACCATT
Product: tRNA CCA-pyrophosphorylase
Products: NA
Alternate protein names: tRNA CCA-pyrophosphorylase; tRNA adenylyl-/cytidylyl- transferase; tRNA nucleotidyltransferase; tRNA-NT [H]
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MKEILENSMGIQKVLNEVLTDISPTDSEKEELTLFSNAVLHKLKSISEYPILDIIQVGSTARNANLKNDHDIDIFLRFER NTERETLKEVGLRVGKEVIDYFGGISWLEYAEHPYISGKIGKFSLDIVPCYKIENCEKIISAVDRTPLHNEFLVLASLKT DISNEVRLLKKFLKGLSIYGSDLKTAGFSGYLCELLILKYGSFLNLLNDVKTWKLKKVIVLDEIYEMYGLKNDHKFLEFN DSLIVYDPVDLNRNVAAALSLENYCKFIFYSKMFLMNPNKEFFYNFEKKTINKLNERSHGYFLTIEIKRPENVVEDIVYP QMEKLQKSINKLIKEHDFDYLRYTNFADEKVCYLSWEFLVHELPDVKLRVGPPVSSSFGVLNFIKNNEKYFVSGCNVCAY KNRKYKNVQILFNNIVNGKLKGQITYPKYICPENALINIGTFVERI
Sequences:
>Translated_446_residues MKEILENSMGIQKVLNEVLTDISPTDSEKEELTLFSNAVLHKLKSISEYPILDIIQVGSTARNANLKNDHDIDIFLRFER NTERETLKEVGLRVGKEVIDYFGGISWLEYAEHPYISGKIGKFSLDIVPCYKIENCEKIISAVDRTPLHNEFLVLASLKT DISNEVRLLKKFLKGLSIYGSDLKTAGFSGYLCELLILKYGSFLNLLNDVKTWKLKKVIVLDEIYEMYGLKNDHKFLEFN DSLIVYDPVDLNRNVAAALSLENYCKFIFYSKMFLMNPNKEFFYNFEKKTINKLNERSHGYFLTIEIKRPENVVEDIVYP QMEKLQKSINKLIKEHDFDYLRYTNFADEKVCYLSWEFLVHELPDVKLRVGPPVSSSFGVLNFIKNNEKYFVSGCNVCAY KNRKYKNVQILFNNIVNGKLKGQITYPKYICPENALINIGTFVERI >Mature_446_residues MKEILENSMGIQKVLNEVLTDISPTDSEKEELTLFSNAVLHKLKSISEYPILDIIQVGSTARNANLKNDHDIDIFLRFER NTERETLKEVGLRVGKEVIDYFGGISWLEYAEHPYISGKIGKFSLDIVPCYKIENCEKIISAVDRTPLHNEFLVLASLKT DISNEVRLLKKFLKGLSIYGSDLKTAGFSGYLCELLILKYGSFLNLLNDVKTWKLKKVIVLDEIYEMYGLKNDHKFLEFN DSLIVYDPVDLNRNVAAALSLENYCKFIFYSKMFLMNPNKEFFYNFEKKTINKLNERSHGYFLTIEIKRPENVVEDIVYP QMEKLQKSINKLIKEHDFDYLRYTNFADEKVCYLSWEFLVHELPDVKLRVGPPVSSSFGVLNFIKNNEKYFVSGCNVCAY KNRKYKNVQILFNNIVNGKLKGQITYPKYICPENALINIGTFVERI
Specific function: Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing
COG id: COG1746
COG function: function code J; tRNA nucleotidyltransferase (CCA-adding enzyme)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Archaeal CCA-adding enzyme subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008229 - InterPro: IPR002934 - InterPro: IPR011068 - InterPro: IPR015329 [H]
Pfam domain/function: PF01909 NTP_transf_2; PF09249 tRNA_NucTransf2 [H]
EC number: =2.7.7.21; =2.7.7.25 [H]
Molecular weight: Translated: 51777; Mature: 51777
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEILENSMGIQKVLNEVLTDISPTDSEKEELTLFSNAVLHKLKSISEYPILDIIQVGST CHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC ARNANLKNDHDIDIFLRFERNTERETLKEVGLRVGKEVIDYFGGISWLEYAEHPYISGKI CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC GKFSLDIVPCYKIENCEKIISAVDRTPLHNEFLVLASLKTDISNEVRLLKKFLKGLSIYG CEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHHCCC SDLKTAGFSGYLCELLILKYGSFLNLLNDVKTWKLKKVIVLDEIYEMYGLKNDHKFLEFN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC DSLIVYDPVDLNRNVAAALSLENYCKFIFYSKMFLMNPNKEFFYNFEKKTINKLNERSHG CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHEEECHHHHHHHHHCCCCC YFLTIEIKRPENVVEDIVYPQMEKLQKSINKLIKEHDFDYLRYTNFADEKVCYLSWEFLV EEEEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEHHHHH HELPDVKLRVGPPVSSSFGVLNFIKNNEKYFVSGCNVCAYKNRKYKNVQILFNNIVNGKL HCCCCCEEEECCCCCCCCCHHHEEECCCEEEEECCCEEEECCCCCCCCEEEEEHHCCCEE KGQITYPKYICPENALINIGTFVERI EEEEECCCEECCCCCEEEHHHHHHCC >Mature Secondary Structure MKEILENSMGIQKVLNEVLTDISPTDSEKEELTLFSNAVLHKLKSISEYPILDIIQVGST CHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC ARNANLKNDHDIDIFLRFERNTERETLKEVGLRVGKEVIDYFGGISWLEYAEHPYISGKI CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC GKFSLDIVPCYKIENCEKIISAVDRTPLHNEFLVLASLKTDISNEVRLLKKFLKGLSIYG CEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHHCCC SDLKTAGFSGYLCELLILKYGSFLNLLNDVKTWKLKKVIVLDEIYEMYGLKNDHKFLEFN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC DSLIVYDPVDLNRNVAAALSLENYCKFIFYSKMFLMNPNKEFFYNFEKKTINKLNERSHG CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHEEECHHHHHHHHHCCCCC YFLTIEIKRPENVVEDIVYPQMEKLQKSINKLIKEHDFDYLRYTNFADEKVCYLSWEFLV EEEEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEHHHHH HELPDVKLRVGPPVSSSFGVLNFIKNNEKYFVSGCNVCAYKNRKYKNVQILFNNIVNGKL HCCCCCEEEECCCCCCCCCHHHEEECCCEEEEECCCEEEECCCCCCCCEEEEEHHCCCEE KGQITYPKYICPENALINIGTFVERI EEEEECCCEECCCCCEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA