| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398983
Identifier: 150398983
GI number: 150398983
Start: 271367
End: 272347
Strand: Reverse
Name: 150398983
Synonym: Mevan_0229
Alternate gene names: NA
Gene position: 272347-271367 (Counterclockwise)
Preceding gene: 150398992
Following gene: 150398982
Centisome position: 15.83
GC content: 28.34
Gene sequence:
>981_bases ATAAAACTAATTATCAACACCCCTGGAACATATATATCAAAATCAGGAACTCGCTTTAAATTAAAAAATGGCGAAAATGT TCAGGAAATCCCTGCAAAAAAGGTAGAACAAATTTTAATTACTTGCCCTTCTTCCATATCTACTGAGGCAATATCCTTGG CAGTTGAAGAAAATATTGATTTAGTACTCTTAAAAATGAATGGAAAACCCGTAGGTAGATTTTGGCATTCAAAGCACGGG AGTATTTCCACAATTAGAAAAAAACAACTTTTGCTTTCTGAAAATGAACTTGGATTAACACTTGTAAAAGAATGGATTTC TAAAAAAATAGAAAATCAGACTGATTTTTTAAAAATAATTGCTATGAACCGAAGAGATGAAAGAAGAGATTTGATTAATG AAAGTATCCTAAAAATGGATGAAAGGAAAAATAAGTTAAATTCATTAACATTCGAACAAAATATTGATGAAATAAGAAAT ACGATTCAAGGTTATGAGGGTTATTCAAGTAGACTATATTTTGAAATGATTTCAAAAAGTTTACCTGAAAAATATCAATT TAACAAAAGAAGTAGAAATCCTGCAGAGGATTACTTTAACTGCATGTTAAACTACGGCTATGGAATACTTTATTCCCAAA TTGAACGTTCATGTATAATTTCCGGACTTGACCCATATATCGGCATTTTGCATGTTGATAATTACAATAGAAAAGCGTTT ACTTTTGATTTAATTGAAAAATATCGAATATATATTGACAAAATCATTTTTAAAATGTTTTCAACAAAAAAGATAAAAGA TAACTTTTTTGAAGAAATTGAAGGGGGATTTTATTTAGCAAAAGATGGAAAACAAGCGTTAATTTCAGAATACAACCTAT TAATTGAGAGTAAGGAAAAATATCGCGGAAAAAATATGGAAATTCAAAATATAATCCAATTAGAATGCCATAATATTGCA AACAGGATTTTAAATGGGTGA
Upstream 100 bases:
>100_bases TGTTTGAAATAATATCTATCATACTGAACCCCCGTATAAACAAGATATATTATTTAGTTTTAACAATATAATATTATCGG TTTTAATTGGAGGGGATACT
Downstream 100 bases:
>100_bases TCATATGCTTTTATGGGTAATTTACGATATTTCAGATGATAAAATAAGAAGCAAAGTTTCAAAGACATGTTTAAACTATG GATTATACCGCGTTCAAAAA
Product: CRISPR-associated Cas1 family protein
Products: NA
Alternate protein names: CRISPR-Associated Protein; CRISPR-Associated Cas1/Cas4 Family Protein; CRISPR-Associated Protein Cas1 Family; CRISPR-Associated ; CRISPR-Associated HMARI/TNEAP Subtype; Cytoplasmic Protein; Protein Be Involved In DNA Repair; Crispr-Associated A; CRISPR-Associated DNA Polymerase; DNA Polymerase; Cas1 Family CRISPR-Associated Protein
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKLIINTPGTYISKSGTRFKLKNGENVQEIPAKKVEQILITCPSSISTEAISLAVEENIDLVLLKMNGKPVGRFWHSKHG SISTIRKKQLLLSENELGLTLVKEWISKKIENQTDFLKIIAMNRRDERRDLINESILKMDERKNKLNSLTFEQNIDEIRN TIQGYEGYSSRLYFEMISKSLPEKYQFNKRSRNPAEDYFNCMLNYGYGILYSQIERSCIISGLDPYIGILHVDNYNRKAF TFDLIEKYRIYIDKIIFKMFSTKKIKDNFFEEIEGGFYLAKDGKQALISEYNLLIESKEKYRGKNMEIQNIIQLECHNIA NRILNG
Sequences:
>Translated_326_residues MKLIINTPGTYISKSGTRFKLKNGENVQEIPAKKVEQILITCPSSISTEAISLAVEENIDLVLLKMNGKPVGRFWHSKHG SISTIRKKQLLLSENELGLTLVKEWISKKIENQTDFLKIIAMNRRDERRDLINESILKMDERKNKLNSLTFEQNIDEIRN TIQGYEGYSSRLYFEMISKSLPEKYQFNKRSRNPAEDYFNCMLNYGYGILYSQIERSCIISGLDPYIGILHVDNYNRKAF TFDLIEKYRIYIDKIIFKMFSTKKIKDNFFEEIEGGFYLAKDGKQALISEYNLLIESKEKYRGKNMEIQNIIQLECHNIA NRILNG >Mature_326_residues MKLIINTPGTYISKSGTRFKLKNGENVQEIPAKKVEQILITCPSSISTEAISLAVEENIDLVLLKMNGKPVGRFWHSKHG SISTIRKKQLLLSENELGLTLVKEWISKKIENQTDFLKIIAMNRRDERRDLINESILKMDERKNKLNSLTFEQNIDEIRN TIQGYEGYSSRLYFEMISKSLPEKYQFNKRSRNPAEDYFNCMLNYGYGILYSQIERSCIISGLDPYIGILHVDNYNRKAF TFDLIEKYRIYIDKIIFKMFSTKKIKDNFFEEIEGGFYLAKDGKQALISEYNLLIESKEKYRGKNMEIQNIIQLECHNIA NRILNG
Specific function: Unknown
COG id: COG1518
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38066; Mature: 38066
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIINTPGTYISKSGTRFKLKNGENVQEIPAKKVEQILITCPSSISTEAISLAVEENID CEEEEECCCCEEECCCCEEEECCCCCHHHCCHHHHHHHHHCCCCCCCCHHEEEEEECCCC LVLLKMNGKPVGRFWHSKHGSISTIRKKQLLLSENELGLTLVKEWISKKIENQTDFLKII EEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHEEEE AMNRRDERRDLINESILKMDERKNKLNSLTFEQNIDEIRNTIQGYEGYSSRLYFEMISKS ECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LPEKYQFNKRSRNPAEDYFNCMLNYGYGILYSQIERSCIISGLDPYIGILHVDNYNRKAF CCHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEE TFDLIEKYRIYIDKIIFKMFSTKKIKDNFFEEIEGGFYLAKDGKQALISEYNLLIESKEK EHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHEECHHH YRGKNMEIQNIIQLECHNIANRILNG HCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLIINTPGTYISKSGTRFKLKNGENVQEIPAKKVEQILITCPSSISTEAISLAVEENID CEEEEECCCCEEECCCCEEEECCCCCHHHCCHHHHHHHHHCCCCCCCCHHEEEEEECCCC LVLLKMNGKPVGRFWHSKHGSISTIRKKQLLLSENELGLTLVKEWISKKIENQTDFLKII EEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHEEEE AMNRRDERRDLINESILKMDERKNKLNSLTFEQNIDEIRNTIQGYEGYSSRLYFEMISKS ECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LPEKYQFNKRSRNPAEDYFNCMLNYGYGILYSQIERSCIISGLDPYIGILHVDNYNRKAF CCHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEE TFDLIEKYRIYIDKIIFKMFSTKKIKDNFFEEIEGGFYLAKDGKQALISEYNLLIESKEK EHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHEECHHH YRGKNMEIQNIIQLECHNIANRILNG HCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA