| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398942
Identifier: 150398942
GI number: 150398942
Start: 216155
End: 217507
Strand: Reverse
Name: 150398942
Synonym: Mevan_0186
Alternate gene names: NA
Gene position: 217507-216155 (Counterclockwise)
Preceding gene: 150398943
Following gene: 150398941
Centisome position: 12.65
GC content: 28.9
Gene sequence:
>1353_bases ATGCTTAAAAAAACGATTATTGGAATGTTATCTATTTTAATAGCAATTTCTTCAATTTTTGCAATTTCAGATATCACTAT AACTCCAGAAAATCCAAAAGTGGGGGATACTGTTATATTATCTGGAAAAACAAATCCAAATGAGGAAATAACATGCAGTG CATGGTTTGAATTGGCACCTGCATTAAGTGACCCTTATTATGGTGCAATGCTTTATAACGTTGAAATTCCGGAAACCCCA AATAGCTTTAAAGTAACTGCTGAAAACGTAGAAAGTCTAAGTTTAAGTGTTAAAATGGGTTTATGGGTTACAATAAATGG AAACGTTGATTCTTCTGGAAAAGCATCTGTTTCACAATCAAATGTTCCAAAGGGAACTTATGATATTAAAATAGCGGGAA AAATAAAAGATTCAAGTAAGCCCGTTAAAATAAAAATGTCGGCATCAACAAAAATTAAAGCAGATTCAAATGGATATTTT GAATACCGATATAATACTAAACCAATTGAGGAAGGAACCGTTATCCATTTAAATATTGGGGGAGTATCAAAAAACGTTTT GGTTTCAGGAAATACTCCATCTCCAATAGTTACTCCAATTTCCCCAGTAATTGTGGATAAAACTGCCCCAAAAATAAGTA TAATTGAACCTTCAAAGTCAAATTACAGTGAAAATTCTATTGAATACGATATAATTGCTACTGATGACTCTAGCTTTACA TTTAAAATATATTTAAACAGTAGGGAATTAACATATAATAAAGAAGGAAACAATTTTAAAGGAACTTTAAACTTAATTGA TGGTAAAAATGAGCTAAAAATAGTTGCAGAAGATATACACGGGAATAAAAATATAATTACAAAATATATAACCTATTCAA AAGAATCCATTAATAATGACCCAATAAAAGATGATGATTTAAAAAATAAAGTGATTGGTACTATACTATTAAATGTTGGA AATGCACTTTTAACTGTAAATGATGGTACAGTAATTAGTACAAATGGCGAAATAAAGATTCAAGAAGTAAAAATTCCAGA AACCGCTCTTGCATACATAATTTATCCTGAAAATGCGGAATTCTCAAGCCCCTTGAATTTAGAAGTTGATGTATCATTAC TATCGAGTAATTTAAGAGTTATATATTATGACTCAAATAAAGGCTGGGTTAATGTTCCATATAATAAGAATGGAAACATT ATAAGTCTAGAAGTTACCAAATCAGGCCATTATGCAATAAAAGAACTAGAAATTGTTGAAGAAAAAAAGGATTCATTATT TGATAAGATAAAAGGAATTTTAAATGCAGTAAAGATAGGAATAACTGTATTATTTAGTAAAATATTTAAATAA
Upstream 100 bases:
>100_bases TGGTGTATCAAAAACAAATAGCACTACATTATCAATAGTTATTGACCATTAAAAGAGTTAACTACTAAATAAATATTTTT TTTAAATTTTTGGTGATTTA
Downstream 100 bases:
>100_bases CCTAAAAATTAGCAAATAATTTTTAGAATTTTAATTTTTAAATCTCACGTGTTATTAAGAACTTTTAAATTCAAAATATA TTTTTTTATTCAGTTATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MLKKTIIGMLSILIAISSIFAISDITITPENPKVGDTVILSGKTNPNEEITCSAWFELAPALSDPYYGAMLYNVEIPETP NSFKVTAENVESLSLSVKMGLWVTINGNVDSSGKASVSQSNVPKGTYDIKIAGKIKDSSKPVKIKMSASTKIKADSNGYF EYRYNTKPIEEGTVIHLNIGGVSKNVLVSGNTPSPIVTPISPVIVDKTAPKISIIEPSKSNYSENSIEYDIIATDDSSFT FKIYLNSRELTYNKEGNNFKGTLNLIDGKNELKIVAEDIHGNKNIITKYITYSKESINNDPIKDDDLKNKVIGTILLNVG NALLTVNDGTVISTNGEIKIQEVKIPETALAYIIYPENAEFSSPLNLEVDVSLLSSNLRVIYYDSNKGWVNVPYNKNGNI ISLEVTKSGHYAIKELEIVEEKKDSLFDKIKGILNAVKIGITVLFSKIFK
Sequences:
>Translated_450_residues MLKKTIIGMLSILIAISSIFAISDITITPENPKVGDTVILSGKTNPNEEITCSAWFELAPALSDPYYGAMLYNVEIPETP NSFKVTAENVESLSLSVKMGLWVTINGNVDSSGKASVSQSNVPKGTYDIKIAGKIKDSSKPVKIKMSASTKIKADSNGYF EYRYNTKPIEEGTVIHLNIGGVSKNVLVSGNTPSPIVTPISPVIVDKTAPKISIIEPSKSNYSENSIEYDIIATDDSSFT FKIYLNSRELTYNKEGNNFKGTLNLIDGKNELKIVAEDIHGNKNIITKYITYSKESINNDPIKDDDLKNKVIGTILLNVG NALLTVNDGTVISTNGEIKIQEVKIPETALAYIIYPENAEFSSPLNLEVDVSLLSSNLRVIYYDSNKGWVNVPYNKNGNI ISLEVTKSGHYAIKELEIVEEKKDSLFDKIKGILNAVKIGITVLFSKIFK >Mature_450_residues MLKKTIIGMLSILIAISSIFAISDITITPENPKVGDTVILSGKTNPNEEITCSAWFELAPALSDPYYGAMLYNVEIPETP NSFKVTAENVESLSLSVKMGLWVTINGNVDSSGKASVSQSNVPKGTYDIKIAGKIKDSSKPVKIKMSASTKIKADSNGYF EYRYNTKPIEEGTVIHLNIGGVSKNVLVSGNTPSPIVTPISPVIVDKTAPKISIIEPSKSNYSENSIEYDIIATDDSSFT FKIYLNSRELTYNKEGNNFKGTLNLIDGKNELKIVAEDIHGNKNIITKYITYSKESINNDPIKDDDLKNKVIGTILLNVG NALLTVNDGTVISTNGEIKIQEVKIPETALAYIIYPENAEFSSPLNLEVDVSLLSSNLRVIYYDSNKGWVNVPYNKNGNI ISLEVTKSGHYAIKELEIVEEKKDSLFDKIKGILNAVKIGITVLFSKIFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49324; Mature: 49324
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKTIIGMLSILIAISSIFAISDITITPENPKVGDTVILSGKTNPNEEITCSAWFELAP CCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEECC ALSDPYYGAMLYNVEIPETPNSFKVTAENVESLSLSVKMGLWVTINGNVDSSGKASVSQS CCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCC NVPKGTYDIKIAGKIKDSSKPVKIKMSASTKIKADSNGYFEYRYNTKPIEEGTVIHLNIG CCCCCEEEEEEEEEECCCCCCEEEEEECCEEEEECCCCEEEEEECCCCCCCCCEEEEEEC GVSKNVLVSGNTPSPIVTPISPVIVDKTAPKISIIEPSKSNYSENSIEYDIIATDDSSFT CCCCEEEEECCCCCCEECCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCEE FKIYLNSRELTYNKEGNNFKGTLNLIDGKNELKIVAEDIHGNKNIITKYITYSKESINND EEEEECCCEEEECCCCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEEECHHHCCCC PIKDDDLKNKVIGTILLNVGNALLTVNDGTVISTNGEIKIQEVKIPETALAYIIYPENAE CCCCCCHHHHEEEEEEEECCCEEEEEECCEEEECCCCEEEEEEECCCEEEEEEEEECCCC FSSPLNLEVDVSLLSSNLRVIYYDSNKGWVNVPYNKNGNIISLEVTKSGHYAIKELEIVE CCCCCEEEEEEEEECCCCEEEEEECCCCEEECCCCCCCCEEEEEEECCCCEEEEEEHHHH EKKDSLFDKIKGILNAVKIGITVLFSKIFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKKTIIGMLSILIAISSIFAISDITITPENPKVGDTVILSGKTNPNEEITCSAWFELAP CCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEECC ALSDPYYGAMLYNVEIPETPNSFKVTAENVESLSLSVKMGLWVTINGNVDSSGKASVSQS CCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCC NVPKGTYDIKIAGKIKDSSKPVKIKMSASTKIKADSNGYFEYRYNTKPIEEGTVIHLNIG CCCCCEEEEEEEEEECCCCCCEEEEEECCEEEEECCCCEEEEEECCCCCCCCCEEEEEEC GVSKNVLVSGNTPSPIVTPISPVIVDKTAPKISIIEPSKSNYSENSIEYDIIATDDSSFT CCCCEEEEECCCCCCEECCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCEE FKIYLNSRELTYNKEGNNFKGTLNLIDGKNELKIVAEDIHGNKNIITKYITYSKESINND EEEEECCCEEEECCCCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEEECHHHCCCC PIKDDDLKNKVIGTILLNVGNALLTVNDGTVISTNGEIKIQEVKIPETALAYIIYPENAE CCCCCCHHHHEEEEEEEECCCEEEEEECCEEEECCCCEEEEEEECCCEEEEEEEEECCCC FSSPLNLEVDVSLLSSNLRVIYYDSNKGWVNVPYNKNGNIISLEVTKSGHYAIKELEIVE CCCCCEEEEEEEEECCCCEEEEEECCCCEEECCCCCCCCEEEEEEECCCCEEEEEEHHHH EKKDSLFDKIKGILNAVKIGITVLFSKIFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA