| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398943
Identifier: 150398943
GI number: 150398943
Start: 217556
End: 219574
Strand: Reverse
Name: 150398943
Synonym: Mevan_0187
Alternate gene names: NA
Gene position: 219574-217556 (Counterclockwise)
Preceding gene: 150398944
Following gene: 150398942
Centisome position: 12.77
GC content: 33.63
Gene sequence:
>2019_bases ATGAAATCTATCAGTTTCTTTATCCCGCTTCTTCTCCTCATTTCTGCAATTCCAACCGGCTTTGCGATTAATGATGAGGT AGTTGTAATTGCATCAACTCAAGCAGATGCAATTTTAGCTGCGCAATATGCAAGAGAAATGGGATATAAATTTGTATATA CTCCTTCAGACAGTTTGTCTGAAGAAGCAGAAAAAACAATCCAAAATGCTAAAAATGCAATAATTATTGGTGGCCCAAAT GCGGTCAGCGAAAATGTTAAAAACCAATTATCCGCAAAAATACCTAATGTTGAAAGGGTATTTGGTGAAACTCGTGTTGA AACATCAAATGCTTTATTTAAAAAATTAATTACTGAAAAACCAGAAGCTTTAAAAAATGTTGTAATTGCAGAAGGTTTTA ATGAAGATGTTACCCCTGCAGCATTGAGTTTTGGTGCACCGGTGCTATATTACTCACCTGAAAACTTTGAAAGCATTCAA GAGACATTAAGATCATTAAATGTTGAAAATGCGGTTTTAATGGGTAGTAATATACCAAATGGGATTAGGCAAGTTGCAAG TGAAGTTTCAAAGTCAACCACTGTAGCTTCAGGAACTGTTGAAAATATTGTTAAAACAGTTTTATCAGCAGCCCCAAGAA TAAACCCAAGTATAGTAAATACAGTATCATCAGTAGTGTATTCAAGTCAGACAACAGACCCATTGATGGCTGCAATTACA GGATATGCTGAAGGTAACTTTGGGTCAGTTGTTCCCGTAACTGGAATTAGTAGAGATTCAATTAATGATGTAATTTCCTC AACAACGAAATTTACCTCACAAATTTCAATTTCAAGTGATAACAAGGAAGTTTCAGAAAGTATTTCTAAAACTGTATCTG AAAGTGGTGCAACCCCATCCACAACTACCCCGAGTAGTAGCGGAGGAAATAAAGGTGGAAGTGGTAGTTCAGTTAAACCT GAGCCAGAAGTTTACTTTATTGGAATAGTATATGATGCAAATACTGATAAAATCGTTGCAATGAAGCAGTTAAGTCCTTC TTCAGCTCCAGATAGTTATTCAGGAAATGTTATAACACCATTAAACTATACAATAGTTTCTAAAGGGTCGCAACACATTA AATTTGCAGATATGGGTAGTTCAAAAGATACTGGAAACCATTTAGAAATTGTTTCAGAAGAAAAAGTTACTCTTCCAAAA CTCACCATAAATTCAGACGTTTCAAATAAGAGTTACGGTGGAGTAAATATTACATTTTTAGGTAATGCAAACGCTTTAAA CCTAGTATACCCAATTGCAAATGGTGCTATTACTTATGGGAATCCTTTAAACGTTACTTATTATGGAAATGAAAACTTTG TAAATAACGGTGATAAAGTTACCGCACACGTAATTTCAAATAGGCAGGACTTTAGGGATGCAATGACTAAGTCGCTAAAT GGAGATACTACTGCATTTATTAATATGTTAAATAATGCAGATAATTACACTACACAATTTAATTCAACATCAAAAACTGC TAAATTTATGGTAACTCCAAAAAACCATGGTGAAAATATCGTTATAATAACCCATGGTGACAACGGGCTTATTCCACTTA ATAACAATGTAACAGTTTTAGGATTTAGCGGATTTGAATTCCTTAAATATAGATTGGACATGACTAAAGCATACACTTCA ACATCCGTTTCAACTACGTATGATTTTAATATAGGAATGAACTTAAATCAAACACCCGCAAACAATGTAAGATACGGACT TATCGGAATTACTAAATCAGGATACGGGTTTACAATAGATATTGAAGGTAAAGATACCAACAATAAAAACTTTGATGTTT CAATTGTTGGAAACAAAGGGTCTTCAAATATCGTTGGAAATTCAAAAATAGTTTCATTAAATGCAATTAAGGTAAAAGAA ATATTGGAAGCCGCATTTACTTCAAAAACAGCAGGCGCAGCATATAGTGGTGTATCAAAAACAAATAGCACTACATTATC AATAGTTATTGACCATTAA
Upstream 100 bases:
>100_bases GATTTTAAGTTGGGATTAATTGTATAAATTTATATAATATGGTGTCACAATAAGATTATATCATTTATAAAAGTTATCCA TGTAAAAAAGGAGGGAGTTT
Downstream 100 bases:
>100_bases AAGAGTTAACTACTAAATAAATATTTTTTTTAAATTTTTGGTGATTTAATGCTTAAAAAAACGATTATTGGAATGTTATC TATTTTAATAGCAATTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MKSISFFIPLLLLISAIPTGFAINDEVVVIASTQADAILAAQYAREMGYKFVYTPSDSLSEEAEKTIQNAKNAIIIGGPN AVSENVKNQLSAKIPNVERVFGETRVETSNALFKKLITEKPEALKNVVIAEGFNEDVTPAALSFGAPVLYYSPENFESIQ ETLRSLNVENAVLMGSNIPNGIRQVASEVSKSTTVASGTVENIVKTVLSAAPRINPSIVNTVSSVVYSSQTTDPLMAAIT GYAEGNFGSVVPVTGISRDSINDVISSTTKFTSQISISSDNKEVSESISKTVSESGATPSTTTPSSSGGNKGGSGSSVKP EPEVYFIGIVYDANTDKIVAMKQLSPSSAPDSYSGNVITPLNYTIVSKGSQHIKFADMGSSKDTGNHLEIVSEEKVTLPK LTINSDVSNKSYGGVNITFLGNANALNLVYPIANGAITYGNPLNVTYYGNENFVNNGDKVTAHVISNRQDFRDAMTKSLN GDTTAFINMLNNADNYTTQFNSTSKTAKFMVTPKNHGENIVIITHGDNGLIPLNNNVTVLGFSGFEFLKYRLDMTKAYTS TSVSTTYDFNIGMNLNQTPANNVRYGLIGITKSGYGFTIDIEGKDTNNKNFDVSIVGNKGSSNIVGNSKIVSLNAIKVKE ILEAAFTSKTAGAAYSGVSKTNSTTLSIVIDH
Sequences:
>Translated_672_residues MKSISFFIPLLLLISAIPTGFAINDEVVVIASTQADAILAAQYAREMGYKFVYTPSDSLSEEAEKTIQNAKNAIIIGGPN AVSENVKNQLSAKIPNVERVFGETRVETSNALFKKLITEKPEALKNVVIAEGFNEDVTPAALSFGAPVLYYSPENFESIQ ETLRSLNVENAVLMGSNIPNGIRQVASEVSKSTTVASGTVENIVKTVLSAAPRINPSIVNTVSSVVYSSQTTDPLMAAIT GYAEGNFGSVVPVTGISRDSINDVISSTTKFTSQISISSDNKEVSESISKTVSESGATPSTTTPSSSGGNKGGSGSSVKP EPEVYFIGIVYDANTDKIVAMKQLSPSSAPDSYSGNVITPLNYTIVSKGSQHIKFADMGSSKDTGNHLEIVSEEKVTLPK LTINSDVSNKSYGGVNITFLGNANALNLVYPIANGAITYGNPLNVTYYGNENFVNNGDKVTAHVISNRQDFRDAMTKSLN GDTTAFINMLNNADNYTTQFNSTSKTAKFMVTPKNHGENIVIITHGDNGLIPLNNNVTVLGFSGFEFLKYRLDMTKAYTS TSVSTTYDFNIGMNLNQTPANNVRYGLIGITKSGYGFTIDIEGKDTNNKNFDVSIVGNKGSSNIVGNSKIVSLNAIKVKE ILEAAFTSKTAGAAYSGVSKTNSTTLSIVIDH >Mature_672_residues MKSISFFIPLLLLISAIPTGFAINDEVVVIASTQADAILAAQYAREMGYKFVYTPSDSLSEEAEKTIQNAKNAIIIGGPN AVSENVKNQLSAKIPNVERVFGETRVETSNALFKKLITEKPEALKNVVIAEGFNEDVTPAALSFGAPVLYYSPENFESIQ ETLRSLNVENAVLMGSNIPNGIRQVASEVSKSTTVASGTVENIVKTVLSAAPRINPSIVNTVSSVVYSSQTTDPLMAAIT GYAEGNFGSVVPVTGISRDSINDVISSTTKFTSQISISSDNKEVSESISKTVSESGATPSTTTPSSSGGNKGGSGSSVKP EPEVYFIGIVYDANTDKIVAMKQLSPSSAPDSYSGNVITPLNYTIVSKGSQHIKFADMGSSKDTGNHLEIVSEEKVTLPK LTINSDVSNKSYGGVNITFLGNANALNLVYPIANGAITYGNPLNVTYYGNENFVNNGDKVTAHVISNRQDFRDAMTKSLN GDTTAFINMLNNADNYTTQFNSTSKTAKFMVTPKNHGENIVIITHGDNGLIPLNNNVTVLGFSGFEFLKYRLDMTKAYTS TSVSTTYDFNIGMNLNQTPANNVRYGLIGITKSGYGFTIDIEGKDTNNKNFDVSIVGNKGSSNIVGNSKIVSLNAIKVKE ILEAAFTSKTAGAAYSGVSKTNSTTLSIVIDH
Specific function: Unknown
COG id: COG2247
COG function: function code M; Putative cell wall-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71547; Mature: 71547
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSISFFIPLLLLISAIPTGFAINDEVVVIASTQADAILAAQYAREMGYKFVYTPSDSLS CCCHHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHH EEAEKTIQNAKNAIIIGGPNAVSENVKNQLSAKIPNVERVFGETRVETSNALFKKLITEK HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHCCHHCCHHHHHHHHHHHCC PEALKNVVIAEGFNEDVTPAALSFGAPVLYYSPENFESIQETLRSLNVENAVLMGSNIPN CHHHHCEEEECCCCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCH GIRQVASEVSKSTTVASGTVENIVKTVLSAAPRINPSIVNTVSSVVYSSQTTDPLMAAIT HHHHHHHHHHHCCEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHC GYAEGNFGSVVPVTGISRDSINDVISSTTKFTSQISISSDNKEVSESISKTVSESGATPS CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHCCCCCC TTTPSSSGGNKGGSGSSVKPEPEVYFIGIVYDANTDKIVAMKQLSPSSAPDSYSGNVITP CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEECC LNYTIVSKGSQHIKFADMGSSKDTGNHLEIVSEEKVTLPKLTINSDVSNKSYGGVNITFL CEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCEEECEEEECCCCCCCCCCCEEEEEE GNANALNLVYPIANGAITYGNPLNVTYYGNENFVNNGDKVTAHVISNRQDFRDAMTKSLN ECCCEEEEEEEECCCEEEECCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCC GDTTAFINMLNNADNYTTQFNSTSKTAKFMVTPKNHGENIVIITHGDNGLIPLNNNVTVL CCHHEEHHHHCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCEEECCCCEEEE GFSGFEFLKYRLDMTKAYTSTSVSTTYDFNIGMNLNQTPANNVRYGLIGITKSGYGFTID EECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCEEEEE IEGKDTNNKNFDVSIVGNKGSSNIVGNSKIVSLNAIKVKEILEAAFTSKTAGAAYSGVSK EECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCEECCCCC TNSTTLSIVIDH CCCEEEEEEEEC >Mature Secondary Structure MKSISFFIPLLLLISAIPTGFAINDEVVVIASTQADAILAAQYAREMGYKFVYTPSDSLS CCCHHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHH EEAEKTIQNAKNAIIIGGPNAVSENVKNQLSAKIPNVERVFGETRVETSNALFKKLITEK HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHCCHHCCHHHHHHHHHHHCC PEALKNVVIAEGFNEDVTPAALSFGAPVLYYSPENFESIQETLRSLNVENAVLMGSNIPN CHHHHCEEEECCCCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCH GIRQVASEVSKSTTVASGTVENIVKTVLSAAPRINPSIVNTVSSVVYSSQTTDPLMAAIT HHHHHHHHHHHCCEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHC GYAEGNFGSVVPVTGISRDSINDVISSTTKFTSQISISSDNKEVSESISKTVSESGATPS CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHCCCCCC TTTPSSSGGNKGGSGSSVKPEPEVYFIGIVYDANTDKIVAMKQLSPSSAPDSYSGNVITP CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEECC LNYTIVSKGSQHIKFADMGSSKDTGNHLEIVSEEKVTLPKLTINSDVSNKSYGGVNITFL CEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCEEECEEEECCCCCCCCCCCEEEEEE GNANALNLVYPIANGAITYGNPLNVTYYGNENFVNNGDKVTAHVISNRQDFRDAMTKSLN ECCCEEEEEEEECCCEEEECCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCC GDTTAFINMLNNADNYTTQFNSTSKTAKFMVTPKNHGENIVIITHGDNGLIPLNNNVTVL CCHHEEHHHHCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCEEECCCCEEEE GFSGFEFLKYRLDMTKAYTSTSVSTTYDFNIGMNLNQTPANNVRYGLIGITKSGYGFTID EECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCEEEEE IEGKDTNNKNFDVSIVGNKGSSNIVGNSKIVSLNAIKVKEILEAAFTSKTAGAAYSGVSK EECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCEECCCCC TNSTTLSIVIDH CCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA