| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398904
Identifier: 150398904
GI number: 150398904
Start: 168068
End: 168283
Strand: Reverse
Name: 150398904
Synonym: Mevan_0148
Alternate gene names: NA
Gene position: 168283-168068 (Counterclockwise)
Preceding gene: 150398905
Following gene: 150398903
Centisome position: 9.78
GC content: 33.8
Gene sequence:
>216_bases ATGAAATGTTATCTTTGTAAACTACAGGGAAAAGATACTGATGCTGTTGCATCATGTATTGTTTGTGGAATGGGAGTATG TATTGACCACGTAGTACGTGAAGAAGTAGATTTATGGGAAGGAGGATACCCTTTTCCATCTAAAAAATTAAAAAATAAAA TTCCAAGAATGCTATGTATTCCGTGCCATGAAGCTTATAAAGAGGGTAAAAAATGA
Upstream 100 bases:
>100_bases ATGTTTAGCTGATTTTAGACACCAGTACTGCCAGTACAAAGAAGCGGTTTAATTAAGCCGTTTTTAAAATTTTTTTAAAA TTTTTTCAAGGGGTTATAAA
Downstream 100 bases:
>100_bases GCTTGCTAAAAAGAGCGATTGCTGAAGCACTTGGAACGCTAATTTTAGTATTTTTTGGGCCCGGTGCCGCAGTAATTACT CTATTAATTGCAAATAGTGC
Product: zinc finger protein
Products: NA
Alternate protein names: Conserved Zinc Finger Protein AF
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MKCYLCKLQGKDTDAVASCIVCGMGVCIDHVVREEVDLWEGGYPFPSKKLKNKIPRMLCIPCHEAYKEGKK
Sequences:
>Translated_71_residues MKCYLCKLQGKDTDAVASCIVCGMGVCIDHVVREEVDLWEGGYPFPSKKLKNKIPRMLCIPCHEAYKEGKK >Mature_71_residues MKCYLCKLQGKDTDAVASCIVCGMGVCIDHVVREEVDLWEGGYPFPSKKLKNKIPRMLCIPCHEAYKEGKK
Specific function: Unknown
COG id: COG4855
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8006; Mature: 8006
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 14.1 %Cys+Met (Translated Protein) 9.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 14.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCYLCKLQGKDTDAVASCIVCGMGVCIDHVVREEVDLWEGGYPFPSKKLKNKIPRMLCI CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEE PCHEAYKEGKK CCHHHHCCCCC >Mature Secondary Structure MKCYLCKLQGKDTDAVASCIVCGMGVCIDHVVREEVDLWEGGYPFPSKKLKNKIPRMLCI CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEE PCHEAYKEGKK CCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA