Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

Click here to switch to the map view.

The map label for this gene is 150398905

Identifier: 150398905

GI number: 150398905

Start: 168332

End: 169831

Strand: Reverse

Name: 150398905

Synonym: Mevan_0149

Alternate gene names: NA

Gene position: 169831-168332 (Counterclockwise)

Preceding gene: 150398912

Following gene: 150398904

Centisome position: 9.87

GC content: 35.6

Gene sequence:

>1500_bases
ATGGAAGAACTTTTTTCAAAAATGGTTGATGAAGCCATGGCTGCCCAGTGGGCTGATGTAAATATTATTAAAGAAAAACG
GGGTAAGGACTTTAAAATAAAACATGCTAAAAGCTATGTTGATGTTGCAAATAAAATGGAACCTGTTTCAGGGCAGTGTC
CAGCAGTATTTAGTCTTCATAAAGATTCAATAAACGCACATTTTGATATACTTTGTGACCTTACAAAAACTGTAAGGCCA
GAAGATGACCCGTTTGTTGAACATTACCAAACCCCTGCAATTTTAGAAATATTATATAAAGAAGACCCGGAATTTAGAAA
AAGCGTTGAAAAATTTATCGATGCAGTAGATAAATCAGAATCTTTAATCGGGCGGGAAGTTATACGCAGATACGCTGGTT
TTTACGGGCCAACGTGTGTAGTAGATTTTGCATTAATACCTGGAAGTACGAGTAATATTGTAAACCAGATTTTAAAAGAC
GTAGATATTCCTAAAAACCATAAACAAGCTATTTTAGCCGCTAAATCTTGGGGGATGAATACATCTTATGGATTTGGAGA
AAAATTTGCAAATGCAATTGAATTAGGAAAATCTGTAAATGAGGCAATTAAAGAAGAACTTGAAATGATTAAATTAGTTT
ATGATAGGCCAATAGATGCACAGGCAAAATTAATGGATGATTTTGGCCATAAAAGTTTTGATGTAAGAAAATACATGTCA
GAATATAAAAGAAGAATGGAAAAGTCCGTAAAAGAAGCACTTGAACAGGAAGTACATTATGGAAACATTGTAACGGTTCC
GGCTTACTGTGTAGGTGACATTTCGCACCACGTTGCACAATCTACCTTTAACATGTGTAAAGATGACGTTATAATGTCCG
TAATTGAGGCAGTATCTGAAGTAATGGATACTACATTACGGGAAAATGTAAAAAACTTTAAAAATGAATATCAGGTACTT
TCTGTTGCAACAGGGTCAACTGCGGCTGCAACAGAGTGTATTCTTGAATTAGACGGATTTAATGCACCAACAGTAGTAGA
TTTACTTACAAAACGATTCCATAATTTTGTACAGCTTAATCCTACGAGAAGTGCTGCTGCAGAGTTACACAACCACGACT
TTATGGATATGATATATAGGGGATGGAAATTAATTGATAAAGCTAGAAGGGTTAAAAATGGAAGCGGGGATAAATTAAAA
CCAAAAGTTGGGGAATTTAGTGTAAACCTTGACCCGATATTTAATAATGAGGTTTTAATGAATCCTCAAAGGTATGCATA
TCCTGGATGTGCAATAACAGTACGATTTTCAGCACTCATGAGGCTTTCTGATTATCCATGCCTTTTAACAAGTGAACCAG
TAACTGCAACTTTAATGACAAACATTATTGCACTACATAAAGAAACTCCTGGGGCCCCTGCAAGAGTATGTAAAGACTGT
GCAACTGCATGTTTAGCTGATTTTAGACACCAGTACTGCCAGTACAAAGAAGCGGTTTAA

Upstream 100 bases:

>100_bases
TATGGCAAAAATAGTTAGGTGTGGACTTAACTTAGAATAATTATTTTATACCATATTTAACTTTTAGTGCCAAATATTAA
ATCAAGAGAGGGGATTTAAT

Downstream 100 bases:

>100_bases
TTAAGCCGTTTTTAAAATTTTTTTAAAATTTTTTCAAGGGGTTATAAAATGAAATGTTATCTTTGTAAACTACAGGGAAA
AGATACTGATGCTGTTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MEELFSKMVDEAMAAQWADVNIIKEKRGKDFKIKHAKSYVDVANKMEPVSGQCPAVFSLHKDSINAHFDILCDLTKTVRP
EDDPFVEHYQTPAILEILYKEDPEFRKSVEKFIDAVDKSESLIGREVIRRYAGFYGPTCVVDFALIPGSTSNIVNQILKD
VDIPKNHKQAILAAKSWGMNTSYGFGEKFANAIELGKSVNEAIKEELEMIKLVYDRPIDAQAKLMDDFGHKSFDVRKYMS
EYKRRMEKSVKEALEQEVHYGNIVTVPAYCVGDISHHVAQSTFNMCKDDVIMSVIEAVSEVMDTTLRENVKNFKNEYQVL
SVATGSTAAATECILELDGFNAPTVVDLLTKRFHNFVQLNPTRSAAAELHNHDFMDMIYRGWKLIDKARRVKNGSGDKLK
PKVGEFSVNLDPIFNNEVLMNPQRYAYPGCAITVRFSALMRLSDYPCLLTSEPVTATLMTNIIALHKETPGAPARVCKDC
ATACLADFRHQYCQYKEAV

Sequences:

>Translated_499_residues
MEELFSKMVDEAMAAQWADVNIIKEKRGKDFKIKHAKSYVDVANKMEPVSGQCPAVFSLHKDSINAHFDILCDLTKTVRP
EDDPFVEHYQTPAILEILYKEDPEFRKSVEKFIDAVDKSESLIGREVIRRYAGFYGPTCVVDFALIPGSTSNIVNQILKD
VDIPKNHKQAILAAKSWGMNTSYGFGEKFANAIELGKSVNEAIKEELEMIKLVYDRPIDAQAKLMDDFGHKSFDVRKYMS
EYKRRMEKSVKEALEQEVHYGNIVTVPAYCVGDISHHVAQSTFNMCKDDVIMSVIEAVSEVMDTTLRENVKNFKNEYQVL
SVATGSTAAATECILELDGFNAPTVVDLLTKRFHNFVQLNPTRSAAAELHNHDFMDMIYRGWKLIDKARRVKNGSGDKLK
PKVGEFSVNLDPIFNNEVLMNPQRYAYPGCAITVRFSALMRLSDYPCLLTSEPVTATLMTNIIALHKETPGAPARVCKDC
ATACLADFRHQYCQYKEAV
>Mature_499_residues
MEELFSKMVDEAMAAQWADVNIIKEKRGKDFKIKHAKSYVDVANKMEPVSGQCPAVFSLHKDSINAHFDILCDLTKTVRP
EDDPFVEHYQTPAILEILYKEDPEFRKSVEKFIDAVDKSESLIGREVIRRYAGFYGPTCVVDFALIPGSTSNIVNQILKD
VDIPKNHKQAILAAKSWGMNTSYGFGEKFANAIELGKSVNEAIKEELEMIKLVYDRPIDAQAKLMDDFGHKSFDVRKYMS
EYKRRMEKSVKEALEQEVHYGNIVTVPAYCVGDISHHVAQSTFNMCKDDVIMSVIEAVSEVMDTTLRENVKNFKNEYQVL
SVATGSTAAATECILELDGFNAPTVVDLLTKRFHNFVQLNPTRSAAAELHNHDFMDMIYRGWKLIDKARRVKNGSGDKLK
PKVGEFSVNLDPIFNNEVLMNPQRYAYPGCAITVRFSALMRLSDYPCLLTSEPVTATLMTNIIALHKETPGAPARVCKDC
ATACLADFRHQYCQYKEAV

Specific function: Unknown

COG id: COG4883

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56322; Mature: 56322

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELFSKMVDEAMAAQWADVNIIKEKRGKDFKIKHAKSYVDVANKMEPVSGQCPAVFSLH
CHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCEEEEEC
KDSINAHFDILCDLTKTVRPEDDPFVEHYQTPAILEILYKEDPEFRKSVEKFIDAVDKSE
CCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SLIGREVIRRYAGFYGPTCVVDFALIPGSTSNIVNQILKDVDIPKNHKQAILAAKSWGMN
HHHHHHHHHHHHCCCCCHHHEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
TSYGFGEKFANAIELGKSVNEAIKEELEMIKLVYDRPIDAQAKLMDDFGHKSFDVRKYMS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH
EYKRRMEKSVKEALEQEVHYGNIVTVPAYCVGDISHHVAQSTFNMCKDDVIMSVIEAVSE
HHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMDTTLRENVKNFKNEYQVLSVATGSTAAATECILELDGFNAPTVVDLLTKRFHNFVQLN
HHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECC
PTRSAAAELHNHDFMDMIYRGWKLIDKARRVKNGSGDKLKPKVGEFSVNLDPIFNNEVLM
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEE
NPQRYAYPGCAITVRFSALMRLSDYPCLLTSEPVTATLMTNIIALHKETPGAPARVCKDC
CCHHHCCCCCEEEHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
ATACLADFRHQYCQYKEAV
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEELFSKMVDEAMAAQWADVNIIKEKRGKDFKIKHAKSYVDVANKMEPVSGQCPAVFSLH
CHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCEEEEEC
KDSINAHFDILCDLTKTVRPEDDPFVEHYQTPAILEILYKEDPEFRKSVEKFIDAVDKSE
CCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SLIGREVIRRYAGFYGPTCVVDFALIPGSTSNIVNQILKDVDIPKNHKQAILAAKSWGMN
HHHHHHHHHHHHCCCCCHHHEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
TSYGFGEKFANAIELGKSVNEAIKEELEMIKLVYDRPIDAQAKLMDDFGHKSFDVRKYMS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH
EYKRRMEKSVKEALEQEVHYGNIVTVPAYCVGDISHHVAQSTFNMCKDDVIMSVIEAVSE
HHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMDTTLRENVKNFKNEYQVLSVATGSTAAATECILELDGFNAPTVVDLLTKRFHNFVQLN
HHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECC
PTRSAAAELHNHDFMDMIYRGWKLIDKARRVKNGSGDKLKPKVGEFSVNLDPIFNNEVLM
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEE
NPQRYAYPGCAITVRFSALMRLSDYPCLLTSEPVTATLMTNIIALHKETPGAPARVCKDC
CCHHHCCCCCEEEHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
ATACLADFRHQYCQYKEAV
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA