| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398888
Identifier: 150398888
GI number: 150398888
Start: 146558
End: 148645
Strand: Reverse
Name: 150398888
Synonym: Mevan_0132
Alternate gene names: NA
Gene position: 148645-146558 (Counterclockwise)
Preceding gene: 150398889
Following gene: 150398887
Centisome position: 8.64
GC content: 27.49
Gene sequence:
>2088_bases ATGAAAATAAAAACCTTAGTTTTTATAGCATTGATCTTTTGCATTGTGCCCCAGACGTTTTCAGAGGAAATTTCAGTAGT ATTAAACTCTAGTTCTGATTCTTTTTTTATTGGTGAATCTTTTGATTTAGAATTAAATCTTTTAAATATTCCCTCAGATA AAAAATGTGGTGGCTTTGAAACACGGATATCTTACGATAAAACTCAATTACAACTATCAAGTATTACCCTATCAAAAGAT TTAAATTCCGATATTGGGGACGTATCTTTGTCAAATGGTAGGATTAGTATTGTATGGTTTTCAACTCCTCCAACTGGCGA TATAAATATTGCAAAAATAAAATTTAACGTATTAAAAGAAGGTAATTCCACTATTGAATTACTGGGGACTACTGTTTCTG ATTCTAACGGTTTTACGTACAATAATATGACTTTGAGTAATTTAAAAGTTAAATTATCTCCCTTAGGGTACACAGTTACT GAAATTGACTTAATTAATTACGAAACAAATAAAAAAATAAATTCTAAAATATCAATAAAAGGTGTTAAAACCCCTTTAAA AAATATATCTGGAAATATTTACTTTGAAAACATATCTATTATGGATAATCCTGTTCCAAATATATTATGTTCAAAATTTA ATTACGAAGTTAGGGATAATAATCTTTCATTTTTCATGATTCCAAATTCAATTTATGAAAATGAAACATTTATTAATTTA TTAACTCTTCCAATAACTGTAAAGAACGATGATTATAGAATAACTCCAAAAGTTTATGTAAATGATATTCTTTTAGATAA TTTTTCAGTAAATGAAAAAAAGCAAGATGAGAATCAAGATACTTTTGATGGATTTATGTTTTATGTTGATGGGAAATATA CTGAAAAAATGGATACGACGATAGGTAATTCCAAAACAATTAGATTAAGAGCAAATAACTTCAAAGAAAACCTTACCGAT ATTTCAGGATATATTTTTATTAATGATTCAATTTTCGAAATCTTAGACTATAAAATACCCGAAGTTTCAGAAGTTTATTC AAAGTTGAATAGGTCAAAATCAAATAATCCTAATATTTACGTAAATGAGAGTTATCTTTATTTTAACATTTCTCTAAAAG AACAAACGACAACAAATACATTTAGTTTACTGGAGTTTAGGGTGACTCCAAAGACAAATGAAAATACTTCTTCAAAAGTT CATGTTGGAAATATTACCGTATACTCAAATGAAACTGAAATTTTACCTAAATTTAAAGAATTAACTATAAGTGTTATTGA AAGGCGTAAAAATATTCCGCCAGTAACTAGAATATATTACACAATACACAATAATAATGAAGTAAATTTCCAAGCAATAA GTCATGATGAAGATGATGATTTAGATAGTTTGAAATACTATTGGGAATTTGGAAATGGAAAAAATTCAACTAGGGAAAAG TCTTCTCAAAAATATCCTGACTACTCCATGTACCTTGTTTCGTGTAAAGTCACTGACCCATTAAATGCAAGTTATACTGC AAAAGGAATAATCGAAATTTTAAACATTAATCCAATCACCTATGAGGTATCTAACAGATCATTTAAAACTCTTAAATCGG GTGAAAATGAAACAATAGTTTTAAACATGAGTTTAACAAACCCATTTACATATCCAGTAAGCGTATATATTGAATTTACT GGAACTGGAAGCCCCAATAGTCCAAGATATAATATCGAATTAAATAGCCAAGAAAATAAAACGGTTAACTTAAAGTTAGA TGTTTCAAAAACTACTGAAATAAAATGGAATGTGCGGTACTATCCTCCAGTATCCTTAGGTAATAAAGATATTGCAATTG GATATTACCAATGGGACTTTACAGAAAAAATTGAATTTATAGATCCGCCAAAAATTATAAATTCAACAGAAATTGTTGAC ATTGAAGGGAGTAATATACTTTTAAAGGTAAATAAAGTGAAAAAGGTTGAAAATCAGGTAATTGAGCAAAGTTTTTCTGA TTCAGGATTTTCAATAATTTACTACTGCTTTGCATCAATTTTAGGAGTATTTACAGGACTTACTTTTGTGAACTCTAAAA TAAAATAA
Upstream 100 bases:
>100_bases AAAATAATGGTTCAATAAATCCTTTTTTATTATTATCTATATTTTTTGGTAGCATTATTTCTGGGGCAGTATTTGGTTCA ATATTTAAGGGGAAGACATT
Downstream 100 bases:
>100_bases AATAAAATTCAGTCATAACTACGGGTATTATTTTTTATTAGTATTACTTTTTTTTGTTTTATAATAAATTTTATATACTA TCTTGATAGTTATACTATTT
Product: cellulosome anchoring protein cohesin region
Products: NA
Alternate protein names: PKD Domain-Containing Protein; APHP Domain Protein; APHP Domain-Containing Protein; PKD Domain Containing Protein
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MKIKTLVFIALIFCIVPQTFSEEISVVLNSSSDSFFIGESFDLELNLLNIPSDKKCGGFETRISYDKTQLQLSSITLSKD LNSDIGDVSLSNGRISIVWFSTPPTGDINIAKIKFNVLKEGNSTIELLGTTVSDSNGFTYNNMTLSNLKVKLSPLGYTVT EIDLINYETNKKINSKISIKGVKTPLKNISGNIYFENISIMDNPVPNILCSKFNYEVRDNNLSFFMIPNSIYENETFINL LTLPITVKNDDYRITPKVYVNDILLDNFSVNEKKQDENQDTFDGFMFYVDGKYTEKMDTTIGNSKTIRLRANNFKENLTD ISGYIFINDSIFEILDYKIPEVSEVYSKLNRSKSNNPNIYVNESYLYFNISLKEQTTTNTFSLLEFRVTPKTNENTSSKV HVGNITVYSNETEILPKFKELTISVIERRKNIPPVTRIYYTIHNNNEVNFQAISHDEDDDLDSLKYYWEFGNGKNSTREK SSQKYPDYSMYLVSCKVTDPLNASYTAKGIIEILNINPITYEVSNRSFKTLKSGENETIVLNMSLTNPFTYPVSVYIEFT GTGSPNSPRYNIELNSQENKTVNLKLDVSKTTEIKWNVRYYPPVSLGNKDIAIGYYQWDFTEKIEFIDPPKIINSTEIVD IEGSNILLKVNKVKKVENQVIEQSFSDSGFSIIYYCFASILGVFTGLTFVNSKIK
Sequences:
>Translated_695_residues MKIKTLVFIALIFCIVPQTFSEEISVVLNSSSDSFFIGESFDLELNLLNIPSDKKCGGFETRISYDKTQLQLSSITLSKD LNSDIGDVSLSNGRISIVWFSTPPTGDINIAKIKFNVLKEGNSTIELLGTTVSDSNGFTYNNMTLSNLKVKLSPLGYTVT EIDLINYETNKKINSKISIKGVKTPLKNISGNIYFENISIMDNPVPNILCSKFNYEVRDNNLSFFMIPNSIYENETFINL LTLPITVKNDDYRITPKVYVNDILLDNFSVNEKKQDENQDTFDGFMFYVDGKYTEKMDTTIGNSKTIRLRANNFKENLTD ISGYIFINDSIFEILDYKIPEVSEVYSKLNRSKSNNPNIYVNESYLYFNISLKEQTTTNTFSLLEFRVTPKTNENTSSKV HVGNITVYSNETEILPKFKELTISVIERRKNIPPVTRIYYTIHNNNEVNFQAISHDEDDDLDSLKYYWEFGNGKNSTREK SSQKYPDYSMYLVSCKVTDPLNASYTAKGIIEILNINPITYEVSNRSFKTLKSGENETIVLNMSLTNPFTYPVSVYIEFT GTGSPNSPRYNIELNSQENKTVNLKLDVSKTTEIKWNVRYYPPVSLGNKDIAIGYYQWDFTEKIEFIDPPKIINSTEIVD IEGSNILLKVNKVKKVENQVIEQSFSDSGFSIIYYCFASILGVFTGLTFVNSKIK >Mature_695_residues MKIKTLVFIALIFCIVPQTFSEEISVVLNSSSDSFFIGESFDLELNLLNIPSDKKCGGFETRISYDKTQLQLSSITLSKD LNSDIGDVSLSNGRISIVWFSTPPTGDINIAKIKFNVLKEGNSTIELLGTTVSDSNGFTYNNMTLSNLKVKLSPLGYTVT EIDLINYETNKKINSKISIKGVKTPLKNISGNIYFENISIMDNPVPNILCSKFNYEVRDNNLSFFMIPNSIYENETFINL LTLPITVKNDDYRITPKVYVNDILLDNFSVNEKKQDENQDTFDGFMFYVDGKYTEKMDTTIGNSKTIRLRANNFKENLTD ISGYIFINDSIFEILDYKIPEVSEVYSKLNRSKSNNPNIYVNESYLYFNISLKEQTTTNTFSLLEFRVTPKTNENTSSKV HVGNITVYSNETEILPKFKELTISVIERRKNIPPVTRIYYTIHNNNEVNFQAISHDEDDDLDSLKYYWEFGNGKNSTREK SSQKYPDYSMYLVSCKVTDPLNASYTAKGIIEILNINPITYEVSNRSFKTLKSGENETIVLNMSLTNPFTYPVSVYIEFT GTGSPNSPRYNIELNSQENKTVNLKLDVSKTTEIKWNVRYYPPVSLGNKDIAIGYYQWDFTEKIEFIDPPKIINSTEIVD IEGSNILLKVNKVKKVENQVIEQSFSDSGFSIIYYCFASILGVFTGLTFVNSKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79223; Mature: 79223
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS50093 PKD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKTLVFIALIFCIVPQTFSEEISVVLNSSSDSFFIGESFDLELNLLNIPSDKKCGGFE CCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCEEEEEEEEECCCCCCCCCEE TRISYDKTQLQLSSITLSKDLNSDIGDVSLSNGRISIVWFSTPPTGDINIAKIKFNVLKE EEEECCHHEEEEEEEEEECCCCCCCCCEEECCCEEEEEEECCCCCCCEEEEEEEEEEEEC GNSTIELLGTTVSDSNGFTYNNMTLSNLKVKLSPLGYTVTEIDLINYETNKKINSKISIK CCCEEEEEEEEEECCCCEEECCEEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCEEEEE GVKTPLKNISGNIYFENISIMDNPVPNILCSKFNYEVRDNNLSFFMIPNSIYENETFINL EECCCHHHCCCEEEEEEEEEECCCCCCCEECCCCEEEECCCEEEEECCCHHCCCCEEEEE LTLPITVKNDDYRITPKVYVNDILLDNFSVNEKKQDENQDTFDGFMFYVDGKYTEKMDTT EEEEEEEECCCEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHC IGNSKTIRLRANNFKENLTDISGYIFINDSIFEILDYKIPEVSEVYSKLNRSKSNNPNIY CCCCEEEEEEECCCCCCCCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCEE VNESYLYFNISLKEQTTTNTFSLLEFRVTPKTNENTSSKVHVGNITVYSNETEILPKFKE EECEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCHHCCCCHHH LTISVIERRKNIPPVTRIYYTIHNNNEVNFQAISHDEDDDLDSLKYYWEFGNGKNSTREK HHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCC SSQKYPDYSMYLVSCKVTDPLNASYTAKGIIEILNINPITYEVSNRSFKTLKSGENETIV HHCCCCCEEEEEEEEEECCCCCCCEECCCEEEEEECCEEEEEECCCCEEHHHCCCCCEEE LNMSLTNPFTYPVSVYIEFTGTGSPNSPRYNIELNSQENKTVNLKLDVSKTTEIKWNVRY EEEEECCCEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEEEEE YPPVSLGNKDIAIGYYQWDFTEKIEFIDPPKIINSTEIVDIEGSNILLKVNKVKKVENQV ECCCCCCCCEEEEEEEEECCCCCEEECCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHH IEQSFSDSGFSIIYYCFASILGVFTGLTFVNSKIK HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKIKTLVFIALIFCIVPQTFSEEISVVLNSSSDSFFIGESFDLELNLLNIPSDKKCGGFE CCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCEEEEEEEEECCCCCCCCCEE TRISYDKTQLQLSSITLSKDLNSDIGDVSLSNGRISIVWFSTPPTGDINIAKIKFNVLKE EEEECCHHEEEEEEEEEECCCCCCCCCEEECCCEEEEEEECCCCCCCEEEEEEEEEEEEC GNSTIELLGTTVSDSNGFTYNNMTLSNLKVKLSPLGYTVTEIDLINYETNKKINSKISIK CCCEEEEEEEEEECCCCEEECCEEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCEEEEE GVKTPLKNISGNIYFENISIMDNPVPNILCSKFNYEVRDNNLSFFMIPNSIYENETFINL EECCCHHHCCCEEEEEEEEEECCCCCCCEECCCCEEEECCCEEEEECCCHHCCCCEEEEE LTLPITVKNDDYRITPKVYVNDILLDNFSVNEKKQDENQDTFDGFMFYVDGKYTEKMDTT EEEEEEEECCCEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHC IGNSKTIRLRANNFKENLTDISGYIFINDSIFEILDYKIPEVSEVYSKLNRSKSNNPNIY CCCCEEEEEEECCCCCCCCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCEE VNESYLYFNISLKEQTTTNTFSLLEFRVTPKTNENTSSKVHVGNITVYSNETEILPKFKE EECEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCHHCCCCHHH LTISVIERRKNIPPVTRIYYTIHNNNEVNFQAISHDEDDDLDSLKYYWEFGNGKNSTREK HHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCC SSQKYPDYSMYLVSCKVTDPLNASYTAKGIIEILNINPITYEVSNRSFKTLKSGENETIV HHCCCCCEEEEEEEEEECCCCCCCEECCCEEEEEECCEEEEEECCCCEEHHHCCCCCEEE LNMSLTNPFTYPVSVYIEFTGTGSPNSPRYNIELNSQENKTVNLKLDVSKTTEIKWNVRY EEEEECCCEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEEEEE YPPVSLGNKDIAIGYYQWDFTEKIEFIDPPKIINSTEIVDIEGSNILLKVNKVKKVENQV ECCCCCCCCEEEEEEEEECCCCCEEECCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHH IEQSFSDSGFSIIYYCFASILGVFTGLTFVNSKIK HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA