Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

Click here to switch to the map view.

The map label for this gene is 150398889

Identifier: 150398889

GI number: 150398889

Start: 148642

End: 149505

Strand: Reverse

Name: 150398889

Synonym: Mevan_0133

Alternate gene names: NA

Gene position: 149505-148642 (Counterclockwise)

Preceding gene: 150398890

Following gene: 150398888

Centisome position: 8.69

GC content: 29.05

Gene sequence:

>864_bases
ATGAAACTAATTACTATTTTAACATTATTTTTTTTTATTTTTGCAATATTTAGTCAAAATTTTGCATTAGATAATCTTAT
TTTAAAGATTGACCCAAATACAATCGAAACTAACGGGGAATTATTATATTTTAATATCAGTGTTGAAAATATCCCTCAAA
AGGGGGGAATATATAGTGGAATGGATGGTTCAACCGTAATTGATGAAGAGTTAGATGGAGGCCTTGGAGCATTAGATGTT
CATATCGACTTTTCCACAGAAAATTTGCAACCTATCGAGTTTAATTGGAGCGAAAATTGTAAAAATGAAAAGTGGAAAGA
ATTCAAATTTGAAAATGGTAATTTTTACCTTTCAATTACTTTTGATGAAACACGGTATGAAGATTCAGTTTTTATTGGAA
CTATTGTATTTAGCCCTAAAAAAGAATCAAATACCGAACTTAGTTTATCCGGAACTACCAGTTCAGACTTAGGATATGGA
TATAGTAAGATATCCCGAATAGCAAATACTAAAACAGGAACTACACGTTTAATATATCCTGATACGGAATTTAAAGGTTC
AGAAATAATCATAAATGGGGTAAAAGAGTATGGGGGAAGTACAAAGTTAGAAGATACGTTTGATGATTCAAAAATAGCAT
CTAGTTCCGGTTCAAATGTAGTTTACAATATTCAAGTTATACCAAATCAAAAAGAACCGGAAATAATTATAAAAGAAGTA
TATATTGAGGAAATATCCCCAAATATAACCATAATAGTTAAAAATAATGGTTCAATAAATCCTTTTTTATTATTATCTAT
ATTTTTTGGTAGCATTATTTCTGGGGCAGTATTTGGTTCAATATTTAAGGGGAAGACATTATGA

Upstream 100 bases:

>100_bases
AATAACTGTTTCTGGAAATTTAAATTCTGAAGACTCAAAATCTGAAAATGCAATATCAAGGTTCATAAACTACATTTTAA
GTTTCTTTTTCGGTGGTTAA

Downstream 100 bases:

>100_bases
AAATAAAAACCTTAGTTTTTATAGCATTGATCTTTTGCATTGTGCCCCAGACGTTTTCAGAGGAAATTTCAGTAGTATTA
AACTCTAGTTCTGATTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKLITILTLFFFIFAIFSQNFALDNLILKIDPNTIETNGELLYFNISVENIPQKGGIYSGMDGSTVIDEELDGGLGALDV
HIDFSTENLQPIEFNWSENCKNEKWKEFKFENGNFYLSITFDETRYEDSVFIGTIVFSPKKESNTELSLSGTTSSDLGYG
YSKISRIANTKTGTTRLIYPDTEFKGSEIIINGVKEYGGSTKLEDTFDDSKIASSSGSNVVYNIQVIPNQKEPEIIIKEV
YIEEISPNITIIVKNNGSINPFLLLSIFFGSIISGAVFGSIFKGKTL

Sequences:

>Translated_287_residues
MKLITILTLFFFIFAIFSQNFALDNLILKIDPNTIETNGELLYFNISVENIPQKGGIYSGMDGSTVIDEELDGGLGALDV
HIDFSTENLQPIEFNWSENCKNEKWKEFKFENGNFYLSITFDETRYEDSVFIGTIVFSPKKESNTELSLSGTTSSDLGYG
YSKISRIANTKTGTTRLIYPDTEFKGSEIIINGVKEYGGSTKLEDTFDDSKIASSSGSNVVYNIQVIPNQKEPEIIIKEV
YIEEISPNITIIVKNNGSINPFLLLSIFFGSIISGAVFGSIFKGKTL
>Mature_287_residues
MKLITILTLFFFIFAIFSQNFALDNLILKIDPNTIETNGELLYFNISVENIPQKGGIYSGMDGSTVIDEELDGGLGALDV
HIDFSTENLQPIEFNWSENCKNEKWKEFKFENGNFYLSITFDETRYEDSVFIGTIVFSPKKESNTELSLSGTTSSDLGYG
YSKISRIANTKTGTTRLIYPDTEFKGSEIIINGVKEYGGSTKLEDTFDDSKIASSSGSNVVYNIQVIPNQKEPEIIIKEV
YIEEISPNITIIVKNNGSINPFLLLSIFFGSIISGAVFGSIFKGKTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31953; Mature: 31953

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLITILTLFFFIFAIFSQNFALDNLILKIDPNTIETNGELLYFNISVENIPQKGGIYSG
CHHHHHHHHHHHHHHHHCCCCEECEEEEEECCCEEECCCCEEEEEEEEECCCCCCCCCCC
MDGSTVIDEELDGGLGALDVHIDFSTENLQPIEFNWSENCKNEKWKEFKFENGNFYLSIT
CCCCEEEHHHCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEE
FDETRYEDSVFIGTIVFSPKKESNTELSLSGTTSSDLGYGYSKISRIANTKTGTTRLIYP
ECCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEC
DTEFKGSEIIINGVKEYGGSTKLEDTFDDSKIASSSGSNVVYNIQVIPNQKEPEIIIKEV
CCCCCCCEEEEEEHHHCCCCCCCCCCCCCCHHCCCCCCEEEEEEEECCCCCCCCEEEEEE
YIEEISPNITIIVKNNGSINPFLLLSIFFGSIISGAVFGSIFKGKTL
EHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLITILTLFFFIFAIFSQNFALDNLILKIDPNTIETNGELLYFNISVENIPQKGGIYSG
CHHHHHHHHHHHHHHHHCCCCEECEEEEEECCCEEECCCCEEEEEEEEECCCCCCCCCCC
MDGSTVIDEELDGGLGALDVHIDFSTENLQPIEFNWSENCKNEKWKEFKFENGNFYLSIT
CCCCEEEHHHCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEE
FDETRYEDSVFIGTIVFSPKKESNTELSLSGTTSSDLGYGYSKISRIANTKTGTTRLIYP
ECCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEC
DTEFKGSEIIINGVKEYGGSTKLEDTFDDSKIASSSGSNVVYNIQVIPNQKEPEIIIKEV
CCCCCCCEEEEEEHHHCCCCCCCCCCCCCCHHCCCCCCEEEEEEEECCCCCCCCEEEEEE
YIEEISPNITIIVKNNGSINPFLLLSIFFGSIISGAVFGSIFKGKTL
EHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA