| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is hemG [H]
Identifier: 150398836
GI number: 150398836
Start: 76468
End: 76950
Strand: Reverse
Name: hemG [H]
Synonym: Mevan_0077
Alternate gene names: 150398836
Gene position: 76950-76468 (Counterclockwise)
Preceding gene: 150398837
Following gene: 150398831
Centisome position: 4.47
GC content: 23.4
Gene sequence:
>483_bases ATGGAAACCATAATTTTATTTGATACAAGATATGGAACAACTAATAAAGTAAGTAATATCATTGCTGAAAAATTAACGAC ATATGGTTGTAATTGTAAAGTAGCAAATATTAATGAAAATCAAAATTTAGAATTAGATAAGTATGATAGAATAATTATTG GTGGGCCAATATATGCTGGTAACTTTCAAAAAAACATGAAAAAATTCTTAGAAAAAAACCTATCAATTTTAAAAGAAAAA GAAATATCTCTTTTTATTTGCTTTATGAATGAAGAAAAACAAATTGAGCAGTTCAATAATGCATTTCCTAATGAATTAGC TGTAAATTGTAAGACAAAAGGTTTTTTAGGCGGAGAATTTTTATTTGATAAAATGGGTTTTTTTGATAAATCCATTGTTA GAATAATTACAAAAAGTAATAAAAATCAAACAAACATTAAAAATGAGTCGATTGAAGAGTTTGTAATGGATATTTTAAAG TAA
Upstream 100 bases:
>100_bases TAGTGAAAAAGATTATGAAAAAATTGTAAATTTTAAAGAATAATTTAGTTTTTCTTTTCTAATCTTTATTTAAAGGAGTT AAATTTAAAGGAGTTAAAAT
Downstream 100 bases:
>100_bases ATTCAATAATTATTTTTTCTAAAATTTTTAAATTTTAAAATAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT AAATAAAAAAGATTAATAGG
Product: flavodoxin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues METIILFDTRYGTTNKVSNIIAEKLTTYGCNCKVANINENQNLELDKYDRIIIGGPIYAGNFQKNMKKFLEKNLSILKEK EISLFICFMNEEKQIEQFNNAFPNELAVNCKTKGFLGGEFLFDKMGFFDKSIVRIITKSNKNQTNIKNESIEEFVMDILK
Sequences:
>Translated_160_residues METIILFDTRYGTTNKVSNIIAEKLTTYGCNCKVANINENQNLELDKYDRIIIGGPIYAGNFQKNMKKFLEKNLSILKEK EISLFICFMNEEKQIEQFNNAFPNELAVNCKTKGFLGGEFLFDKMGFFDKSIVRIITKSNKNQTNIKNESIEEFVMDILK >Mature_160_residues METIILFDTRYGTTNKVSNIIAEKLTTYGCNCKVANINENQNLELDKYDRIIIGGPIYAGNFQKNMKKFLEKNLSILKEK EISLFICFMNEEKQIEQFNNAFPNELAVNCKTKGFLGGEFLFDKMGFFDKSIVRIITKSNKNQTNIKNESIEEFVMDILK
Specific function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor [H]
COG id: COG4635
COG function: function code CH; Flavodoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1790285, Length=158, Percent_Identity=22.7848101265823, Blast_Score=75, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: =1.3.5.3 [H]
Molecular weight: Translated: 18492; Mature: 18492
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METIILFDTRYGTTNKVSNIIAEKLTTYGCNCKVANINENQNLELDKYDRIIIGGPIYAG CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCEEEC NFQKNMKKFLEKNLSILKEKEISLFICFMNEEKQIEQFNNAFPNELAVNCKTKGFLGGEF CHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCCEEEECCCCCCCCHHH LFDKMGFFDKSIVRIITKSNKNQTNIKNESIEEFVMDILK HHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure METIILFDTRYGTTNKVSNIIAEKLTTYGCNCKVANINENQNLELDKYDRIIIGGPIYAG CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCEEEC NFQKNMKKFLEKNLSILKEKEISLFICFMNEEKQIEQFNNAFPNELAVNCKTKGFLGGEF CHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCCEEEECCCCCCCCHHH LFDKMGFFDKSIVRIITKSNKNQTNIKNESIEEFVMDILK HHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]