| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398784
Identifier: 150398784
GI number: 150398784
Start: 21153
End: 22442
Strand: Reverse
Name: 150398784
Synonym: Mevan_0024
Alternate gene names: NA
Gene position: 22442-21153 (Counterclockwise)
Preceding gene: 150398785
Following gene: 150398783
Centisome position: 1.3
GC content: 25.89
Gene sequence:
>1290_bases ATGCTTAAAACTTTTAAAAAAGACGGGCTTTTAAGGGATAGTACATATATGATTTTTTCAAATATTTATTCAAAATTTAT AGCGTATCTATTTTATTTTATCATCCCGTTTATCCTTGGAACAGAAGGTTTTGGAATTGTTAAAGGGTTACTGCCAATTT TAGACACTTTAGTTATAGTTTTTTGTTCTGGAATTCCTCCTGCAATGGCAAAATTTATTTCAGAAAGTGGCAAAAAATTT AATCCATGGGTTTTTGATATTTTAAAAACCATGTTTATATTATCGATTATTGGAGGAATTTTTACGGTATTTTTAAAGTA TATTCTTCGTGGAAATTATATTGACCTTCCAATATCTTATTTTTATGCAATTTCAATTGCATTACCATGTTCAGTTATTA TCTCATGGAGTAGAGGGATTTTACAAGGGTCTTTAGAAATAAAAAATCTTTCAAAAACATGGATTATTGAAAATACTTCA AAAATCGTTTTTTTAATAATTTTAACATATTTTTTTGGAATTTTTGGAAGTATTCTTTCAATTTCTGTTGCATTTTTAAT TGGGGGAATTTTTGGATTATATTTAATCTCTAAGAATTTAAAAGACTATTCAATTTTAAAAATTTTAAAAAATAAAACCT CAAAAAATAATTTAAATGAAAATAGTGAAATCTCAGTAAAAGACGTAATCTATTATTCAATTCCAATTGCACTAACTACT GCATCTTACAGGCTTTTAAATGATCTTGACGGTATATTTATTCTTTCAATTTTAGGGGCTTTTGAAAATGGGACTTATGG ATATGCATCACTACTTTCAAGGTTTTTATTCTTATTTTCATCAGCAATAGCTGTTGTTTTAATTCCCAGAATTTCAAAAT CTAAAGATATTGGAGAATTTAAAAAAGCAATATTTTTAAATTGCATAATTGTGCTTCCAGCAGTAGTAATTATGATTTTA TTTTCAGAAAATCTTTTAATGTTCTTTTTTGGAATATCTGATCATGGTGCAAACTTAAGCCTTAAAATACTCTCAATTTC AGCACTTTTAATGAGCATGTATACAATATGTGCATCCTCACTTCAAGGTTTAGGATATGCTAAAATTCCAGTCTATATAT TAACATTTGGAATAATCCTAAATGCAATATTAAATTATATTTTAATATCTAATCTTGGAATTACGGGCGGTGCTATTGCA ACTTTAACGTCTTCATTTTCTGTATTTTTAATAATCTCCATAATTACATTTAGAAAGTTAAAAAAGTTAAAAAAAGTTAA ATATTCTTAG
Upstream 100 bases:
>100_bases AAAAAATGGTTGAAAATTTAATTAATAAATAGTTAAAAATTGTTCAAAGTTTAGTTTTCAAATTATATTAATAGTAAATT ATTTAAGTAATTGTGAGTTT
Downstream 100 bases:
>100_bases TAAAAGTTTATTTAATAATCAAATCAAAATTACAGAGTTTACTTAAAGATATATACTTAAAGTGAATAGTTAATTATTCA AATAATTATGGAGATTAGAA
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MLKTFKKDGLLRDSTYMIFSNIYSKFIAYLFYFIIPFILGTEGFGIVKGLLPILDTLVIVFCSGIPPAMAKFISESGKKF NPWVFDILKTMFILSIIGGIFTVFLKYILRGNYIDLPISYFYAISIALPCSVIISWSRGILQGSLEIKNLSKTWIIENTS KIVFLIILTYFFGIFGSILSISVAFLIGGIFGLYLISKNLKDYSILKILKNKTSKNNLNENSEISVKDVIYYSIPIALTT ASYRLLNDLDGIFILSILGAFENGTYGYASLLSRFLFLFSSAIAVVLIPRISKSKDIGEFKKAIFLNCIIVLPAVVIMIL FSENLLMFFFGISDHGANLSLKILSISALLMSMYTICASSLQGLGYAKIPVYILTFGIILNAILNYILISNLGITGGAIA TLTSSFSVFLIISIITFRKLKKLKKVKYS
Sequences:
>Translated_429_residues MLKTFKKDGLLRDSTYMIFSNIYSKFIAYLFYFIIPFILGTEGFGIVKGLLPILDTLVIVFCSGIPPAMAKFISESGKKF NPWVFDILKTMFILSIIGGIFTVFLKYILRGNYIDLPISYFYAISIALPCSVIISWSRGILQGSLEIKNLSKTWIIENTS KIVFLIILTYFFGIFGSILSISVAFLIGGIFGLYLISKNLKDYSILKILKNKTSKNNLNENSEISVKDVIYYSIPIALTT ASYRLLNDLDGIFILSILGAFENGTYGYASLLSRFLFLFSSAIAVVLIPRISKSKDIGEFKKAIFLNCIIVLPAVVIMIL FSENLLMFFFGISDHGANLSLKILSISALLMSMYTICASSLQGLGYAKIPVYILTFGIILNAILNYILISNLGITGGAIA TLTSSFSVFLIISIITFRKLKKLKKVKYS >Mature_429_residues MLKTFKKDGLLRDSTYMIFSNIYSKFIAYLFYFIIPFILGTEGFGIVKGLLPILDTLVIVFCSGIPPAMAKFISESGKKF NPWVFDILKTMFILSIIGGIFTVFLKYILRGNYIDLPISYFYAISIALPCSVIISWSRGILQGSLEIKNLSKTWIIENTS KIVFLIILTYFFGIFGSILSISVAFLIGGIFGLYLISKNLKDYSILKILKNKTSKNNLNENSEISVKDVIYYSIPIALTT ASYRLLNDLDGIFILSILGAFENGTYGYASLLSRFLFLFSSAIAVVLIPRISKSKDIGEFKKAIFLNCIIVLPAVVIMIL FSENLLMFFFGISDHGANLSLKILSISALLMSMYTICASSLQGLGYAKIPVYILTFGIILNAILNYILISNLGITGGAIA TLTSSFSVFLIISIITFRKLKKLKKVKYS
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002528 - InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 47756; Mature: 47756
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTFKKDGLLRDSTYMIFSNIYSKFIAYLFYFIIPFILGTEGFGIVKGLLPILDTLVIV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FCSGIPPAMAKFISESGKKFNPWVFDILKTMFILSIIGGIFTVFLKYILRGNYIDLPISY HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHH FYAISIALPCSVIISWSRGILQGSLEIKNLSKTWIIENTSKIVFLIILTYFFGIFGSILS HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH ISVAFLIGGIFGLYLISKNLKDYSILKILKNKTSKNNLNENSEISVKDVIYYSIPIALTT HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEHHHEEEEEECHHHHH ASYRLLNDLDGIFILSILGAFENGTYGYASLLSRFLFLFSSAIAVVLIPRISKSKDIGEF HHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH KKAIFLNCIIVLPAVVIMILFSENLLMFFFGISDHGANLSLKILSISALLMSMYTICASS HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHH LQGLGYAKIPVYILTFGIILNAILNYILISNLGITGGAIATLTSSFSVFLIISIITFRKL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KKLKKVKYS HHHHHCCCC >Mature Secondary Structure MLKTFKKDGLLRDSTYMIFSNIYSKFIAYLFYFIIPFILGTEGFGIVKGLLPILDTLVIV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FCSGIPPAMAKFISESGKKFNPWVFDILKTMFILSIIGGIFTVFLKYILRGNYIDLPISY HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHH FYAISIALPCSVIISWSRGILQGSLEIKNLSKTWIIENTSKIVFLIILTYFFGIFGSILS HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH ISVAFLIGGIFGLYLISKNLKDYSILKILKNKTSKNNLNENSEISVKDVIYYSIPIALTT HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEHHHEEEEEECHHHHH ASYRLLNDLDGIFILSILGAFENGTYGYASLLSRFLFLFSSAIAVVLIPRISKSKDIGEF HHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH KKAIFLNCIIVLPAVVIMILFSENLLMFFFGISDHGANLSLKILSISALLMSMYTICASS HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHH LQGLGYAKIPVYILTFGIILNAILNYILISNLGITGGAIATLTSSFSVFLIISIITFRKL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KKLKKVKYS HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]