Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150398785

Identifier: 150398785

GI number: 150398785

Start: 22511

End: 23104

Strand: Reverse

Name: 150398785

Synonym: Mevan_0025

Alternate gene names: NA

Gene position: 23104-22511 (Counterclockwise)

Preceding gene: 150398786

Following gene: 150398784

Centisome position: 1.34

GC content: 26.94

Gene sequence:

>594_bases
ATGAATAACAATTCAGGAATTCAAAAATGGCACAGTCATGCAGTACTCCTCATTAATTCTAAAAAATATACCGAAGCACT
AACGTACTATGATAAAATCCTTTCAAATTATCCAAAAGACTTTTTAGCAGTTTTTGGAAAAGGAGTAGTATTTTTAAAAC
TTAAAGAATATGATTTAGCACTGGGTTGTTTTAATAGTGTTTTGAATATGAATCCAGAGTACACGCCCGCAATAAAAAAT
AAAAAAATAATTGAAGAGAAAAAGAAAGAAATTGAAAAAGAAAATTTTAAGAGATTTTTTAAACTTGGAATTGAATGTTA
TTCATTAGGGGAGTACGAAAAAGCATTGAATTACTTTGAAAATGCTTTTTTTATCGACCCTTATTCAAATGCATTGATAA
AAAATTTAGAAAAAACCCGTGAAAAGTTAAAACAGTTAATTCCAGTAAAATGGAATAATAAAGGCGTAGAGTACTATCGT
AAAGGTCAGTACGAAAAAGCACTTGAATGTTTTAAAAAAGCAGTTATTTTAGAACCTAATTTAAAATCTGCGCTGAAAAA
TAAAAAAATGGTTGAAAATTTAATTAATAAATAG

Upstream 100 bases:

>100_bases
CTTTGAAAAAGCACTTGAACTAGATCATACTTCAAACAAACTAAATAAAATAATAAATGCTTTTAAATAGTTAAAAAACC
ATAATTTATCCAGTGAAAAA

Downstream 100 bases:

>100_bases
TTAAAAATTGTTCAAAGTTTAGTTTTCAAATTATATTAATAGTAAATTATTTAAGTAATTGTGAGTTTATGCTTAAAACT
TTTAAAAAAGACGGGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNNNSGIQKWHSHAVLLINSKKYTEALTYYDKILSNYPKDFLAVFGKGVVFLKLKEYDLALGCFNSVLNMNPEYTPAIKN
KKIIEEKKKEIEKENFKRFFKLGIECYSLGEYEKALNYFENAFFIDPYSNALIKNLEKTREKLKQLIPVKWNNKGVEYYR
KGQYEKALECFKKAVILEPNLKSALKNKKMVENLINK

Sequences:

>Translated_197_residues
MNNNSGIQKWHSHAVLLINSKKYTEALTYYDKILSNYPKDFLAVFGKGVVFLKLKEYDLALGCFNSVLNMNPEYTPAIKN
KKIIEEKKKEIEKENFKRFFKLGIECYSLGEYEKALNYFENAFFIDPYSNALIKNLEKTREKLKQLIPVKWNNKGVEYYR
KGQYEKALECFKKAVILEPNLKSALKNKKMVENLINK
>Mature_197_residues
MNNNSGIQKWHSHAVLLINSKKYTEALTYYDKILSNYPKDFLAVFGKGVVFLKLKEYDLALGCFNSVLNMNPEYTPAIKN
KKIIEEKKKEIEKENFKRFFKLGIECYSLGEYEKALNYFENAFFIDPYSNALIKNLEKTREKLKQLIPVKWNNKGVEYYR
KGQYEKALECFKKAVILEPNLKSALKNKKMVENLINK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23161; Mature: 23161

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNSGIQKWHSHAVLLINSKKYTEALTYYDKILSNYPKDFLAVFGKGVVFLKLKEYDLA
CCCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECHHHH
LGCFNSVLNMNPEYTPAIKNKKIIEEKKKEIEKENFKRFFKLGIECYSLGEYEKALNYFE
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NAFFIDPYSNALIKNLEKTREKLKQLIPVKWNNKGVEYYRKGQYEKALECFKKAVILEPN
CCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCC
LKSALKNKKMVENLINK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNNSGIQKWHSHAVLLINSKKYTEALTYYDKILSNYPKDFLAVFGKGVVFLKLKEYDLA
CCCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECHHHH
LGCFNSVLNMNPEYTPAIKNKKIIEEKKKEIEKENFKRFFKLGIECYSLGEYEKALNYFE
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NAFFIDPYSNALIKNLEKTREKLKQLIPVKWNNKGVEYYRKGQYEKALECFKKAVILEPN
CCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCC
LKSALKNKKMVENLINK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA