Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150010477

Identifier: 150010477

GI number: 150010477

Start: 4747868

End: 4749355

Strand: Direct

Name: 150010477

Synonym: BDI_3918

Alternate gene names: NA

Gene position: 4747868-4749355 (Clockwise)

Preceding gene: 150010474

Following gene: 150010478

Centisome position: 98.68

GC content: 39.45

Gene sequence:

>1488_bases
ATGAAAAAATCGTTCATATATATATTTTCAGCTTTCTGTTTCTCTTGTGGAATCAACAGTTGTTCTTTCCTTGACGAGAA
TCCCGTGGACCGTTTGGTCGTGGATAATTTTTATACAAGCGAGAAAGACGCACAGGCAGCGGTAGATGCTACTTATCAGC
AATTAAACAGCTTATATAACCGTTTGATGTATATGATGGCAGAGCTACCTACCGATATGATGAAAAATGGTTTAGGTATG
CCGAACGCAAACTTACAAGACTTGGAGTTTCTGCGATTTAACTCTCAGAATACATTTGTAAAAGATATGTGGAAAAATTG
TTATTCCGGTATTTCTAGGGCAAATACGGCGATTGTTAAGATTCCAGAGATCAAAATGAATGAAAGTAAAAAGAACCGAT
TGATCGCTGAGGCTCGTACACTTCGTGCTCTATACTATTTCAACCTCGTTCGTTTCTTCGGCGATGTTCCTCTAATCTTA
GACTTGAAAACCGTAGAAGATTCAAAAGGACCACGTGATTCTAAAGAACTGATTTATGATCAGATTATAGAAGATCTTAC
ATTTGCGGAAGAACATCTTCCTTTAAGATCTGAATATTCGGCTTCCGATGAGGGCCGTATCAACAAAGGGGCCGCTAAAA
TTTTATTCGGTAAAGTCTATTTGACTAAAGGGGATTTCCAAAAGGCGAAAGATAAATTGGCGGAGGTAGTCGAGCATGAA
TCTGAATATGGCTTCGGTTTACACAAAGATTACCATGCGAACTGGCTTCGAGATACAGAGGCTGGTATTGAGGCTGTACT
TTATATTGAGTATAAAGAACCTCCATTTCAACATAATGGTGAAATGGCGCTTGCTGGTCCGAAATATTCCATTCCGGGGA
GCTTAGGAATCTCTGCCCTTAATGAGGCTGATATCCCGACACAAGAATTGTATGACCAGTTTGATAATCGAGATTTGAGA
AAAAAGACTAATTTTAAAACAGAGTTCGCTCATCTTAAAACCGGTGAAATATTGAAATCAAGTATACCACTTAGCGGTAA
GTTCTGGGTTGAAGGGCTTGAAACGGGTGACCGTTGCGATGTAAATATGCACATTATCAGGTATGCGGACGCTATATTAA
TGTATGCAGAGGCATTAAATGAAGTGGGCGAATCTACAAAGGCTCTCGCTATGTTAAACAGGATACGGGAACGTGCTTTT
GGTGATGATTCTGGAAACTTTAAACCTATGTCGAAGGATGAGTTTCGTACAGCTATATTAAATGAACGACGGCTGGAATT
CCCTCACGAAGGACATCGTTGGTTCGATTTAGTACGTACCGGTACATTTATTCAACGAATGAAAGAGCATAGTGCATATG
AAGCAAAAGTAGCGGAAGCTAATAAAACTGAGATTGCGCAAAATATCAAGGAGCATATGATCCTTATGCCGATCCCTCAA
TCCGAGATAGACTTGAATCCTAATTTAGTACAAAATGCAGGATATTAG

Upstream 100 bases:

>100_bases
AACTTTAGAGGCAGGAGAGGACTTTGGCGGTTATCCGCAAGCCCGTACCTTTATGTTTGGCATTAAATTGGATATTAAAT
AACTTTTAAATCGACTCAAA

Downstream 100 bases:

>100_bases
AAAATTGTTATTTATAACTGGGGTAGCAACTGTTACCCCGGTTATTATACAAGCCCGGGACAAACTTCCTAATATCGTGA
TCTTTTTTATGGATGATATG

Product: hypothetical protein

Products: NA

Alternate protein names: RagB/SusD Domain-Containing Protein; Outer Membrane Protein; SusD/RagB Family Protein; Ragb/Susd Domain Protein; Lipoprotein; RagB/SusD Family Protein; Liporotein

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MKKSFIYIFSAFCFSCGINSCSFLDENPVDRLVVDNFYTSEKDAQAAVDATYQQLNSLYNRLMYMMAELPTDMMKNGLGM
PNANLQDLEFLRFNSQNTFVKDMWKNCYSGISRANTAIVKIPEIKMNESKKNRLIAEARTLRALYYFNLVRFFGDVPLIL
DLKTVEDSKGPRDSKELIYDQIIEDLTFAEEHLPLRSEYSASDEGRINKGAAKILFGKVYLTKGDFQKAKDKLAEVVEHE
SEYGFGLHKDYHANWLRDTEAGIEAVLYIEYKEPPFQHNGEMALAGPKYSIPGSLGISALNEADIPTQELYDQFDNRDLR
KKTNFKTEFAHLKTGEILKSSIPLSGKFWVEGLETGDRCDVNMHIIRYADAILMYAEALNEVGESTKALAMLNRIRERAF
GDDSGNFKPMSKDEFRTAILNERRLEFPHEGHRWFDLVRTGTFIQRMKEHSAYEAKVAEANKTEIAQNIKEHMILMPIPQ
SEIDLNPNLVQNAGY

Sequences:

>Translated_495_residues
MKKSFIYIFSAFCFSCGINSCSFLDENPVDRLVVDNFYTSEKDAQAAVDATYQQLNSLYNRLMYMMAELPTDMMKNGLGM
PNANLQDLEFLRFNSQNTFVKDMWKNCYSGISRANTAIVKIPEIKMNESKKNRLIAEARTLRALYYFNLVRFFGDVPLIL
DLKTVEDSKGPRDSKELIYDQIIEDLTFAEEHLPLRSEYSASDEGRINKGAAKILFGKVYLTKGDFQKAKDKLAEVVEHE
SEYGFGLHKDYHANWLRDTEAGIEAVLYIEYKEPPFQHNGEMALAGPKYSIPGSLGISALNEADIPTQELYDQFDNRDLR
KKTNFKTEFAHLKTGEILKSSIPLSGKFWVEGLETGDRCDVNMHIIRYADAILMYAEALNEVGESTKALAMLNRIRERAF
GDDSGNFKPMSKDEFRTAILNERRLEFPHEGHRWFDLVRTGTFIQRMKEHSAYEAKVAEANKTEIAQNIKEHMILMPIPQ
SEIDLNPNLVQNAGY
>Mature_495_residues
MKKSFIYIFSAFCFSCGINSCSFLDENPVDRLVVDNFYTSEKDAQAAVDATYQQLNSLYNRLMYMMAELPTDMMKNGLGM
PNANLQDLEFLRFNSQNTFVKDMWKNCYSGISRANTAIVKIPEIKMNESKKNRLIAEARTLRALYYFNLVRFFGDVPLIL
DLKTVEDSKGPRDSKELIYDQIIEDLTFAEEHLPLRSEYSASDEGRINKGAAKILFGKVYLTKGDFQKAKDKLAEVVEHE
SEYGFGLHKDYHANWLRDTEAGIEAVLYIEYKEPPFQHNGEMALAGPKYSIPGSLGISALNEADIPTQELYDQFDNRDLR
KKTNFKTEFAHLKTGEILKSSIPLSGKFWVEGLETGDRCDVNMHIIRYADAILMYAEALNEVGESTKALAMLNRIRERAF
GDDSGNFKPMSKDEFRTAILNERRLEFPHEGHRWFDLVRTGTFIQRMKEHSAYEAKVAEANKTEIAQNIKEHMILMPIPQ
SEIDLNPNLVQNAGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56690; Mature: 56690

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSFIYIFSAFCFSCGINSCSFLDENPVDRLVVDNFYTSEKDAQAAVDATYQQLNSLYN
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RLMYMMAELPTDMMKNGLGMPNANLQDLEFLRFNSQNTFVKDMWKNCYSGISRANTAIVK
HHHHHHHHCCHHHHHCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHCCEEEEE
IPEIKMNESKKNRLIAEARTLRALYYFNLVRFFGDVPLILDLKTVEDSKGPRDSKELIYD
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHH
QIIEDLTFAEEHLPLRSEYSASDEGRINKGAAKILFGKVYLTKGDFQKAKDKLAEVVEHE
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEEEEEEECCHHHHHHHHHHHHHHCC
SEYGFGLHKDYHANWLRDTEAGIEAVLYIEYKEPPFQHNGEMALAGPKYSIPGSLGISAL
HHCCCCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHC
NEADIPTQELYDQFDNRDLRKKTNFKTEFAHLKTGEILKSSIPLSGKFWVEGLETGDRCD
CCCCCCHHHHHHHHCCCHHHHHCCCCHHHHHCCHHHHHHHCCCCCCCEEEEECCCCCCCC
VNMHIIRYADAILMYAEALNEVGESTKALAMLNRIRERAFGDDSGNFKPMSKDEFRTAIL
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
NERRLEFPHEGHRWFDLVRTGTFIQRMKEHSAYEAKVAEANKTEIAQNIKEHMILMPIPQ
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEECCC
SEIDLNPNLVQNAGY
CCCCCCCCHHCCCCC
>Mature Secondary Structure
MKKSFIYIFSAFCFSCGINSCSFLDENPVDRLVVDNFYTSEKDAQAAVDATYQQLNSLYN
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RLMYMMAELPTDMMKNGLGMPNANLQDLEFLRFNSQNTFVKDMWKNCYSGISRANTAIVK
HHHHHHHHCCHHHHHCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHCCEEEEE
IPEIKMNESKKNRLIAEARTLRALYYFNLVRFFGDVPLILDLKTVEDSKGPRDSKELIYD
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHH
QIIEDLTFAEEHLPLRSEYSASDEGRINKGAAKILFGKVYLTKGDFQKAKDKLAEVVEHE
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEEEEEEECCHHHHHHHHHHHHHHCC
SEYGFGLHKDYHANWLRDTEAGIEAVLYIEYKEPPFQHNGEMALAGPKYSIPGSLGISAL
HHCCCCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHC
NEADIPTQELYDQFDNRDLRKKTNFKTEFAHLKTGEILKSSIPLSGKFWVEGLETGDRCD
CCCCCCHHHHHHHHCCCHHHHHCCCCHHHHHCCHHHHHHHCCCCCCCEEEEECCCCCCCC
VNMHIIRYADAILMYAEALNEVGESTKALAMLNRIRERAFGDDSGNFKPMSKDEFRTAIL
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
NERRLEFPHEGHRWFDLVRTGTFIQRMKEHSAYEAKVAEANKTEIAQNIKEHMILMPIPQ
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEECCC
SEIDLNPNLVQNAGY
CCCCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA