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The map label for this gene is capD [H]

Identifier: 150010394

GI number: 150010394

Start: 4666720

End: 4667811

Strand: Direct

Name: capD [H]

Synonym: BDI_3831

Alternate gene names: 150010394

Gene position: 4666720-4667811 (Clockwise)

Preceding gene: 150010393

Following gene: 150010395

Centisome position: 96.99

GC content: 47.89

Gene sequence:

>1092_bases
ATGTCTGTATTTGAAAATAAAACCCTGTTAATTACAGGTGGTACGGGCTCTTTCGGAAATGCCGTGCTTCGTCGTTTCTT
GGATAGCGACATTAAGGAGGTTCGTATCTTTTCGCGTGATGAGAAGAAGCAGGATGATATGCGTCATTTCTTGCAGGCGC
AACGCCCCGAGGTAGCTCATAAGGTAAAGTTTTATATTGGAAATGTGCGCCAACGTGAAGCGGTGGATTTCGCTATGGAT
GGGGTAGATTATGTGTTTGCCGCTGCTGCCTTAAAGCAGGTCCCCAGTTGTGAGTTCTTCCCTATGGAAGCTGTGCGTAC
GAATGTTGAGGGTACTAATAATGTGTTGCTCTCAGCGATCGATCATGGAGTGAAGAACGTGGTGGTGCTTTCTACCGATA
AGGCGGCTTATCCTATCAATGCCATGGGTATCTCTAAGGCGATGATGGAGAAGGTGGCTATTGCGCAGGGACGTGCCTTG
GGTGCTAATGCGAAGACTACTATTTGCTGTACTCGCTATGGCAACGTGATGGCTTCTCGAGGCTCAGTGATTCCTTTGTG
GGTGGAGCAGATGATGGATGGCAAGTCTATCACTATCACTGATCCGAATATGACTCGCTTTATGATGACGCTGGATGATG
CCGTGGATTTGGTGGTTTATGCCTTTACGCATGGCGAGAATGGTGACTTGTTCGTACAGAAGGCTCCTGCCGCTACGCTT
TTTACTTTAGCTACGGCCTTGAAGGAGATTTACGCCAAGGTTGATCCTAGGTATGGAGATACGGAGGTGAGAGTGATCGG
TACCCGTCATGGCGAGAAGCTTTACGAGACACTTGTTACCCGCGAGGAGATGTCTAAGGCGATTGATATGGGAGATTATT
ATCGTATCCCTTGTGATAACCGTGACTTGAATTATGATAAGTTTTTTACCGAGGGTAACGAGGAGGTCTCGGTTATCGAG
GATTACCATAGCCATAATACCGCACGCCTAGATGTGGAGGGCATGAAGAAGCTATTGATGCGTTTACGTTTTATCCAAGA
GGACCTTGGGCTGTTGCCTTGCGCTAAGGGCAGGGAGATCCGTTCGGAGTAA

Upstream 100 bases:

>100_bases
TGTGGGGAAAAGGCAGATCTACGAACAATGAAGACTTGATCAAGGAAATATGTAAACGTGTGGAACAAGTACTCTAATTA
ATTTTAATCATTGATATATA

Downstream 100 bases:

>100_bases
TTTCCTTTCTTAATTAATAAATTCTTTGTTTTTAATGAAAATATTAGTGACCGGCTCTAATGGGTTTGTCGGCAGAAATC
TTGTTTGCCAACTCAAAAAT

Product: putative dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSVFENKTLLITGGTGSFGNAVLRRFLDSDIKEVRIFSRDEKKQDDMRHFLQAQRPEVAHKVKFYIGNVRQREAVDFAMD
GVDYVFAAAALKQVPSCEFFPMEAVRTNVEGTNNVLLSAIDHGVKNVVVLSTDKAAYPINAMGISKAMMEKVAIAQGRAL
GANAKTTICCTRYGNVMASRGSVIPLWVEQMMDGKSITITDPNMTRFMMTLDDAVDLVVYAFTHGENGDLFVQKAPAATL
FTLATALKEIYAKVDPRYGDTEVRVIGTRHGEKLYETLVTREEMSKAIDMGDYYRIPCDNRDLNYDKFFTEGNEEVSVIE
DYHSHNTARLDVEGMKKLLMRLRFIQEDLGLLPCAKGREIRSE

Sequences:

>Translated_363_residues
MSVFENKTLLITGGTGSFGNAVLRRFLDSDIKEVRIFSRDEKKQDDMRHFLQAQRPEVAHKVKFYIGNVRQREAVDFAMD
GVDYVFAAAALKQVPSCEFFPMEAVRTNVEGTNNVLLSAIDHGVKNVVVLSTDKAAYPINAMGISKAMMEKVAIAQGRAL
GANAKTTICCTRYGNVMASRGSVIPLWVEQMMDGKSITITDPNMTRFMMTLDDAVDLVVYAFTHGENGDLFVQKAPAATL
FTLATALKEIYAKVDPRYGDTEVRVIGTRHGEKLYETLVTREEMSKAIDMGDYYRIPCDNRDLNYDKFFTEGNEEVSVIE
DYHSHNTARLDVEGMKKLLMRLRFIQEDLGLLPCAKGREIRSE
>Mature_362_residues
SVFENKTLLITGGTGSFGNAVLRRFLDSDIKEVRIFSRDEKKQDDMRHFLQAQRPEVAHKVKFYIGNVRQREAVDFAMDG
VDYVFAAAALKQVPSCEFFPMEAVRTNVEGTNNVLLSAIDHGVKNVVVLSTDKAAYPINAMGISKAMMEKVAIAQGRALG
ANAKTTICCTRYGNVMASRGSVIPLWVEQMMDGKSITITDPNMTRFMMTLDDAVDLVVYAFTHGENGDLFVQKAPAATLF
TLATALKEIYAKVDPRYGDTEVRVIGTRHGEKLYETLVTREEMSKAIDMGDYYRIPCDNRDLNYDKFFTEGNEEVSVIED
YHSHNTARLDVEGMKKLLMRLRFIQEDLGLLPCAKGREIRSE

Specific function: Epimerizes UDP-galactose to UDP-glucose [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869
- InterPro:   IPR013692 [H]

Pfam domain/function: PF08485 Polysacc_syn_2C; PF02719 Polysacc_synt_2 [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 40762; Mature: 40631

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFENKTLLITGGTGSFGNAVLRRFLDSDIKEVRIFSRDEKKQDDMRHFLQAQRPEVAH
CCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHH
KVKFYIGNVRQREAVDFAMDGVDYVFAAAALKQVPSCEFFPMEAVRTNVEGTNNVLLSAI
HHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHH
DHGVKNVVVLSTDKAAYPINAMGISKAMMEKVAIAQGRALGANAKTTICCTRYGNVMASR
HCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHCC
GSVIPLWVEQMMDGKSITITDPNMTRFMMTLDDAVDLVVYAFTHGENGDLFVQKAPAATL
CCEEHHHHHHHHCCCEEEEECCCCEEEEEHHHHHHEEEEEEEEECCCCCEEEEECCCHHH
FTLATALKEIYAKVDPRYGDTEVRVIGTRHGEKLYETLVTREEMSKAIDMGDYYRIPCDN
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
RDLNYDKFFTEGNEEVSVIEDYHSHNTARLDVEGMKKLLMRLRFIQEDLGLLPCAKGREI
CCCCHHHHCCCCCCCEEHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RSE
CCC
>Mature Secondary Structure 
SVFENKTLLITGGTGSFGNAVLRRFLDSDIKEVRIFSRDEKKQDDMRHFLQAQRPEVAH
CCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHH
KVKFYIGNVRQREAVDFAMDGVDYVFAAAALKQVPSCEFFPMEAVRTNVEGTNNVLLSAI
HHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHH
DHGVKNVVVLSTDKAAYPINAMGISKAMMEKVAIAQGRALGANAKTTICCTRYGNVMASR
HCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHCC
GSVIPLWVEQMMDGKSITITDPNMTRFMMTLDDAVDLVVYAFTHGENGDLFVQKAPAATL
CCEEHHHHHHHHCCCEEEEECCCCEEEEEHHHHHHEEEEEEEEECCCCCEEEEECCCHHH
FTLATALKEIYAKVDPRYGDTEVRVIGTRHGEKLYETLVTREEMSKAIDMGDYYRIPCDN
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
RDLNYDKFFTEGNEEVSVIEDYHSHNTARLDVEGMKKLLMRLRFIQEDLGLLPCAKGREI
CCCCHHHHCCCCCCCEEHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RSE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA