| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010393
Identifier: 150010393
GI number: 150010393
Start: 4665455
End: 4666696
Strand: Direct
Name: 150010393
Synonym: BDI_3830
Alternate gene names: NA
Gene position: 4665455-4666696 (Clockwise)
Preceding gene: 150010392
Following gene: 150010394
Centisome position: 96.97
GC content: 35.59
Gene sequence:
>1242_bases ATGAAATTTCTTAATGTTATTTTTAAAGGACATAGTATTTCCGAACTTATTCAAGAGGTAATTTATGTATTTATAGGGTA CTTTTTCCTAATGATTTCTTATTGTACTCCTAGGAACAAAAAAAAGTGGGTGTTTGGTAACAAAAAGATCTTTAAGGATA ATACTAAATACCTCTTTATTTATATGCAGGAACAGCATCCAGAAATCCAAACGATCTGGATAACTTCCTCACGCAGGTTG GTCAAACGTTTACGAGCATTGTCTTACAGTGCATATTATAAGTATAGCCTTAAAGGATTATATCATTCATTGACCGCAGG TGTTTATGTCAGTACGGTAAATTCAAATCACATTAATTTTTTCACTTCCGGGAGAGTTTTCAATGTGAATCTGTGGCATG GAATCTCTTTGAAAGCGATGGTTGATAATAAAGCAGTTCCAGCAGATCGATCGTTTCTTTCACGTGTATGTATGCCTTAT GTCTATGAGCAATATGGCTTGTTCTTTTCAACCACGCCAACGATAGATGACCAGTACTTGCGATTCTTTCGGTTTGATCC GCAAGTATTGTATCATGGTATGTCGCCTCGTTGTTCGTTTATGATGATGGATCATGAGCGTTTGCTTCGCTATATCGAAG AAAAAGAAGACCCCTTGATGTTGGATATTATTCATACTTCACGGAAGTATAACAAGGTATTTGTTTACATGCCCACATGG CGTATCAACTATGGTACGCATTTTATGGACTATGCCTTTCCTGATCTGTATGCCTTGAATAAGGCATTTTCAAAAATAAA TGCCATATTATTACTCAAGCTTCATCCTTCCATGACGTATGATGCGTTTAAATATAAGGATTTGAAGCATATCTATTATA TAGATGCCAATATTGATTTGTATCCGATTTTACCTTTTACGGATATTATGATATCTGACTATTCTTCTATTTGGTATGAC TATTTATTATTACCCAATAAAGGGGTTATCCATTATGATTTCGACGTAGATAGTTATGCGAAAAACGAATTCGGATTCTT TCGTGACTATAAGACATTTACACCAGGAGTACATGCTTCAGATTTTAAGCAATTGCTAGCAACGATAGAAAGTAGCAGCT CGCTACAGATTTCTGAAGAAAGGCGAACTTGGATATTGGATGAGATGTGGGGAAAAGGCAGATCTACGAACAATGAAGAC TTGATCAAGGAAATATGTAAACGTGTGGAACAAGTACTCTAA
Upstream 100 bases:
>100_bases CCGCTAAGTTGCAGGAATTAGGGTGGTCGCCCCAAAATGACTTGAAAGCTATCTTATCAAAACTTATTTCAACTTATAAA TAATTATAGATAGGTATCAC
Downstream 100 bases:
>100_bases TTAATTTTAATCATTGATATATAATGTCTGTATTTGAAAATAAAACCCTGTTAATTACAGGTGGTACGGGCTCTTTCGGA AATGCCGTGCTTCGTCGTTT
Product: putative teichoic acid biosynthesis protein F
Products: NA
Alternate protein names: Glycosyl/Glycerophosphate Transferase; Glycerol Phosphotransferase; Poly(Glycerophosphate) Glycerophosphotransferase; Peptidyl-Dipeptidase A; CDP-Glycerol Glycerophosphotransferase; Glycerophosphotransferase
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MKFLNVIFKGHSISELIQEVIYVFIGYFFLMISYCTPRNKKKWVFGNKKIFKDNTKYLFIYMQEQHPEIQTIWITSSRRL VKRLRALSYSAYYKYSLKGLYHSLTAGVYVSTVNSNHINFFTSGRVFNVNLWHGISLKAMVDNKAVPADRSFLSRVCMPY VYEQYGLFFSTTPTIDDQYLRFFRFDPQVLYHGMSPRCSFMMMDHERLLRYIEEKEDPLMLDIIHTSRKYNKVFVYMPTW RINYGTHFMDYAFPDLYALNKAFSKINAILLLKLHPSMTYDAFKYKDLKHIYYIDANIDLYPILPFTDIMISDYSSIWYD YLLLPNKGVIHYDFDVDSYAKNEFGFFRDYKTFTPGVHASDFKQLLATIESSSSLQISEERRTWILDEMWGKGRSTNNED LIKEICKRVEQVL
Sequences:
>Translated_413_residues MKFLNVIFKGHSISELIQEVIYVFIGYFFLMISYCTPRNKKKWVFGNKKIFKDNTKYLFIYMQEQHPEIQTIWITSSRRL VKRLRALSYSAYYKYSLKGLYHSLTAGVYVSTVNSNHINFFTSGRVFNVNLWHGISLKAMVDNKAVPADRSFLSRVCMPY VYEQYGLFFSTTPTIDDQYLRFFRFDPQVLYHGMSPRCSFMMMDHERLLRYIEEKEDPLMLDIIHTSRKYNKVFVYMPTW RINYGTHFMDYAFPDLYALNKAFSKINAILLLKLHPSMTYDAFKYKDLKHIYYIDANIDLYPILPFTDIMISDYSSIWYD YLLLPNKGVIHYDFDVDSYAKNEFGFFRDYKTFTPGVHASDFKQLLATIESSSSLQISEERRTWILDEMWGKGRSTNNED LIKEICKRVEQVL >Mature_413_residues MKFLNVIFKGHSISELIQEVIYVFIGYFFLMISYCTPRNKKKWVFGNKKIFKDNTKYLFIYMQEQHPEIQTIWITSSRRL VKRLRALSYSAYYKYSLKGLYHSLTAGVYVSTVNSNHINFFTSGRVFNVNLWHGISLKAMVDNKAVPADRSFLSRVCMPY VYEQYGLFFSTTPTIDDQYLRFFRFDPQVLYHGMSPRCSFMMMDHERLLRYIEEKEDPLMLDIIHTSRKYNKVFVYMPTW RINYGTHFMDYAFPDLYALNKAFSKINAILLLKLHPSMTYDAFKYKDLKHIYYIDANIDLYPILPFTDIMISDYSSIWYD YLLLPNKGVIHYDFDVDSYAKNEFGFFRDYKTFTPGVHASDFKQLLATIESSSSLQISEERRTWILDEMWGKGRSTNNED LIKEICKRVEQVL
Specific function: Unknown
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49178; Mature: 49178
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLNVIFKGHSISELIQEVIYVFIGYFFLMISYCTPRNKKKWVFGNKKIFKDNTKYLFI CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCEEEEE YMQEQHPEIQTIWITSSRRLVKRLRALSYSAYYKYSLKGLYHSLTAGVYVSTVNSNHINF EEECCCCCEEEEEEECCHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCEEEEEECCCEEEE FTSGRVFNVNLWHGISLKAMVDNKAVPADRSFLSRVCMPYVYEQYGLFFSTTPTIDDQYL EECCEEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCCCHHHH RFFRFDPQVLYHGMSPRCSFMMMDHERLLRYIEEKEDPLMLDIIHTSRKYNKVFVYMPTW HHHCCCHHHEECCCCCCEEEEEECHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECEE RINYGTHFMDYAFPDLYALNKAFSKINAILLLKLHPSMTYDAFKYKDLKHIYYIDANIDL EEECCCCCHHHCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHCCCCEEEEEEECCCEE YPILPFTDIMISDYSSIWYDYLLLPNKGVIHYDFDVDSYAKNEFGFFRDYKTFTPGVHAS EECCCHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCHHCCCCCCCCCCCCCCCCCCCHH DFKQLLATIESSSSLQISEERRTWILDEMWGKGRSTNNEDLIKEICKRVEQVL HHHHHHHHHCCCCCEEEEHHHHHEEHHHHHCCCCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure MKFLNVIFKGHSISELIQEVIYVFIGYFFLMISYCTPRNKKKWVFGNKKIFKDNTKYLFI CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCEEEEE YMQEQHPEIQTIWITSSRRLVKRLRALSYSAYYKYSLKGLYHSLTAGVYVSTVNSNHINF EEECCCCCEEEEEEECCHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCEEEEEECCCEEEE FTSGRVFNVNLWHGISLKAMVDNKAVPADRSFLSRVCMPYVYEQYGLFFSTTPTIDDQYL EECCEEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCCCHHHH RFFRFDPQVLYHGMSPRCSFMMMDHERLLRYIEEKEDPLMLDIIHTSRKYNKVFVYMPTW HHHCCCHHHEECCCCCCEEEEEECHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECEE RINYGTHFMDYAFPDLYALNKAFSKINAILLLKLHPSMTYDAFKYKDLKHIYYIDANIDL EEECCCCCHHHCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHCCCCEEEEEEECCCEE YPILPFTDIMISDYSSIWYDYLLLPNKGVIHYDFDVDSYAKNEFGFFRDYKTFTPGVHAS EECCCHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCHHCCCCCCCCCCCCCCCCCCCHH DFKQLLATIESSSSLQISEERRTWILDEMWGKGRSTNNEDLIKEICKRVEQVL HHHHHHHHHCCCCCEEEEHHHHHEEHHHHHCCCCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA